KEGG   Oncorhynchus gorbuscha (pink salmon): 124009499
Entry
124009499         CDS       T07892                                 
Name
(RefSeq) coatomer subunit alpha
  KO
K05236  coatomer subunit alpha
Organism
ogo  Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:ogo00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ogo04131]
    124009499
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ogo04147]
    124009499
Membrane trafficking [BR:ogo04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Retrieval pathways
   Coat protein complex I (COP-I)
    124009499
Exosome [BR:ogo04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   124009499
  Exosomal proteins of bladder cancer cells
   124009499
SSDB
Motif
Pfam: COPI_C B-prop_COPA_B_2nd Beta-prop_WDR5 Beta-prop_WDR3_1st WD40 WD40_Prp19 Beta-prop_THOC3 WD40_WDHD1_1st Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR3_2nd WD40_CDC20-Fz WDR55 Beta-prop_EML_2 TPR_COPA_B Beta-prop_WDR36-Utp21_1st EIF3I WD40_Gbeta Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_2nd Beta-prop_EML Beta-prop_CAF1B_HIR1 Beta-prop_EIPR1 Beta-prop_TEP1_C Beta-prop_WDR75_1st ANAPC4_WD40 WD40_RFWD3 WD40_MABP1-WDR62_1st WD40_MABP1-WDR62_2nd Beta-prop_SCAP Beta-prop_WDR41 Beta-prop_Aladin Beta-prop_SPT8 Beta-prop_DCAF4 Beta-prop_IFT140_1st NBCH_WD40 Beta-prop_RIG_2nd
Other DBs
NCBI-GeneID: 124009499
NCBI-ProteinID: XP_046177281
LinkDB
Position
LG22:complement(32313599..32331318)
AA seq 1223 aa
MLTKFETKSARVKGLSFHPKRPWILASLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFH
KQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIW
NWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWDISGLRKKNLSPGAVETD
VRGISGVDLFGASDAVVKHVLEGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNESKAW
ELDTCRGHYNNVSCAVFHPRQELILSNSEDKSIRVWDMSKRTGVQTFRRDHDRFWVLGAH
PNLNLFAAGHDSGMLVFKLERERPAYAVYGNMLYYVKDRFLRQLDFNSSKDTAVMQLRSG
SKFPVFSMSYNPAENAVLLCTRATNLENSTYDLYAIPKESDSQNPDAPEGKRSSGLTAVW
VARNRFAVLDRMHSLLIKNLKNEIVKKVQVPSCEEIFYAGTGSLLLRDADGVTLFDVQQK
RSLATVKIAKVKYVVWSADTSHVALLAKHAIMICNRKLESLCNIHENIRVKSGAWDESGV
FIYTTSNHIKYALTSGDHGIIRTLDLPIYVTRVRGNSVYCLDRECRPRVLTIDPTEYRFK
LALVNRKYEEVLHMVRNAKLVGQSIISYLQKKGYPEVALHFVKDEKTRFTLALECGNIEV
ALEAAKALDERGCWERLGEAALLQGHHQVVEMCYQRTKNFDKLTFLYLITGNLAKLRKMM
KIAEIRKDMSGHYQGALYLGDVSERVRILKNCGQKSLAYLTAATHGMDEEAESLKETFDL
EKETVPEVDLTAQLLQPPPPINPLDTNWPLLTVSKGFFEGAIAAKGKAGQMAADMDVDAP
GGEGWGEDAELQLDEDGFMDAQDGLGEEGGAAKEEGGGWEVEEDLDLPPELELSAGSGGG
AEDGFFVPPTKGMSPTQLWCNNSQLPVDHVLAGSFETAMRLLHDQVGVVQFGPYKQLFMQ
TLSRGRTCYLGLPSLPCLRGNPQRNWKDCGTKQGLPAVGLRLSDLIARLQQCYQLTTAGR
FEEAVERFRAILLSVPLLVVDNKQEIAEAQQLITICREYIVGLTMETERKKLPKDTLDQQ
KRLCEMAAYFTHCSLQPVHMVLVLRTALNLFFKLKNFKTAASFARRLLELGPKPEVAQQT
RKILAACEKTLTDAHQLNYDPHNPFDLCAASYTPLYRGRPVEKCPLSGACYCPPYKGQVC
RVTQVTEIGKDVIGLRVSPLQFR
NT seq 3672 nt   +upstreamnt  +downstreamnt
atgttgaccaaattcgagacgaagtcggcccgtgtgaaagggctgagtttccacccaaaa
cggccctggatccttgctagtcttcacaatggagtcatccagttgtgggactatcggatg
tgcacactgattgacaagttcgatgagcatgatggacctgtcagaggaattgatttccac
aagcaacagcctctgtttgtgtctggaggagatgactacaaaatcaaggtgtggaactac
aagctgcggcgttgcctcttcactcttcttgggcacctggactacatccgcaccaccttc
ttccatcatgagtatccatggattttgagtgcctcagatgaccagacaatacgtatctgg
aactggcagtccaggacctgtgtctgtgtactgacagggcataatcactatgtgatgtgt
gctcagttccacccctctgaggacctagtggtgtcggccagcctggaccagaccgtgcgt
gtgtgggatatctccggtctgaggaagaagaacctctctcccggggccgtagaaactgat
gtgcgaggcatctctggtgtcgatctgttcggagcatccgatgccgttgtcaaacacgtg
ctcgagggtcacgatcgtggggtcaactgggccgccttccatcccaccatgcccctcatc
gtctcaggggctgacgaccggcaggtcaagatctggaggatgaacgagtccaaggcgtgg
gaactggacacctgcaggggccactacaacaacgtgtcctgtgctgtcttccacccccgc
caggagctcatcctgtccaactctgaggacaagagtatccgtgtgtgggacatgtccaaa
aggaccggtgtccagaccttccgcagggaccacgaccgcttctgggtgctgggggctcac
cccaacctcaatctatttgctgctggtcatgacagtggtatgctggtgtttaagctggag
cgtgagcgtccggcctatgctgtgtacggcaacatgctctactatgtcaaggaccgcttc
ctgcgccagctcgactttaacagcagcaaggacaccgctgtcatgcagctgcgcagtggg
tcaaagttccccgtgttcagcatgtcttacaaccccgcagagaatgctgtcttgctctgc
actagggcaaccaacctggagaacagcacctatgacctgtatgccattcccaaagagagc
gactctcagaacccagatgctcctgaggggaagaggtcttccggtctgactgcagtctgg
gtcgcaaggaacaggtttgctgttctggaccgcatgcattctctgctaatcaagaacctg
aagaatgagattgtgaagaaggtgcaggtgcccagctgtgaggagatcttttacgccggg
acaggctccctgctgctgcgcgacgcagatggggtaaccctcttcgacgtgcagcagaaa
cgctcgctggccaccgtgaagatcgccaaggtcaagtatgtggtgtggagtgctgacacc
agccacgtggccctgctggctaaacacgcaattatgatctgcaacaggaagctggagagt
ctgtgcaacatccatgagaacatccgtgtgaagagtggagcctgggacgagagtggcgtc
ttcatttacaccacatctaaccacattaaatacgccctcacctcaggtgatcatggtatc
atccggactctggacctgcccatctacgtgacccgggtcagaggcaacagcgtctactgt
cttgaccgtgagtgcaggccccgtgtgctgaccatcgaccccacggagtaccgcttcaaa
ctggccctggtcaaccgcaaatatgaagaggttctgcacatggtgcgtaacgccaagctg
gttggccagtccatcatctcctacctgcagaagaagggttaccctgaggtagccctgcac
tttgtcaaggatgagaagacccgcttcactctagctctggagtgtggcaacattgaagtg
gcgttggaggctgccaaggctctggatgagaggggctgctgggagcggctgggcgaggct
gcgctgctgcagggtcatcaccaggtcgtggagatgtgctatcagaggaccaagaacttt
gacaagctcaccttcctctacctcatcactggtaacctggccaagctccgcaagatgatg
aagatcgctgagatcaggaaggacatgagtggacactaccagggtgctctgtatctgggg
gacgtcagcgagagagttcgcatactgaagaactgtggccagaagtcactggcatatctg
actgctgctacccacgggatggacgaagaggcagaatccctgaaagagacatttgacctg
gagaaggagactgtccctgaggtggacctcactgcccagctgctgcagccaccaccacct
atcaaccccctggataccaactggcccctgcttactgtgtccaagggcttctttgaggga
gccattgcagccaaagggaaggctggtcagatggctgcagacatggatgttgatgcccca
ggaggagagggctggggagaggatgcagagcttcagctggatgaggatggcttcatggat
gcccaggatggattaggagaggaaggaggtgcagcgaaggaggaaggaggaggttgggag
gtggaggaagatctggaccttcctccagagctggagttgtcagctggctctggaggaggg
gctgaagatggtttctttgtcccgcccactaagggcatgagccccacacagctgtggtgc
aacaactcccagctccctgtggaccacgtcctggcaggctcatttgagaccgccatgagg
ttgctccatgaccaggttggggtggtgcagtttgggccctataagcagctgttcatgcag
actctgtcccgcgggcggacctgctacctgggcctgccttctctaccctgcctgcgtggc
aacccccagaggaactggaaggactgtgggaccaagcaagggctgcctgccgtgggtctt
cgtctttctgacctcatcgcccgcctgcagcagtgctaccagctcaccactgccggccgc
tttgaggaggccgttgaacgcttccgcgccatcctgctgtctgtgccactgctggtggtc
gacaacaagcaggagatcgcagaggctcagcagctgatcacaatctgcagagaatacatt
gttggcctcaccatggaaacagaaaggaagaagttgcctaaagacacattggaccagcag
aagaggctgtgtgagatggcagcttacttcacccactgcagtctccagccagtccacatg
gtcctggtattacgtacggcactaaatctgttcttcaaactgaagaacttcaagacagct
gccagttttgcccgtcgcttgcttgaattagggcccaaaccagaggtggcacagcagaca
cgcaagatcttggcagcatgcgagaagactctgacagatgctcaccagctgaactacgac
ccccacaatccatttgacctgtgcgctgcctcctacacgcccctataccgtggacgcccc
gtggagaagtgccctctgtctggggcctgctactgccccccttacaaaggccaggtctgc
agggtcacacaggtgacggagatcggaaaagatgtgattggtctgcgtgtcagtcccctg
cagttccgttag

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