Oncorhynchus gorbuscha (pink salmon): 124009511
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Entry
124009511 CDS
T07892
Name
(RefSeq) LOW QUALITY PROTEIN: GRB10-interacting GYF protein 2-like
KO
K18730
PERQ amino acid-rich with GYF domain-containing protein
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ogo03019
]
124009511
Messenger RNA biogenesis [BR:
ogo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
124009511
Surveillance factors
Other surveillance factors
124009511
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GYF
GYF_2
Motif
Other DBs
NCBI-GeneID:
124009511
NCBI-ProteinID:
XP_046177313
LinkDB
All DBs
Position
LG22:complement(14830040..14885684)
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AA seq
1458 aa
AA seq
DB search
MEDIRWIHVWVPESLGPGEQEQSKGNREGDRRKQANTQVKLLSEVLERMAETQTLNFGPE
WLRALSGGGHGGGSSSSVATSPPLSPALPKYKLADYRYGREEMLALYVKDREIPVDLHDK
DFLPILQEEPLPPLALVAFTEEEQRNFSMSVNSAAVLRLMGRGGGPVGPGAPRGRSTSRG
RGRGRGDGGFYQRSFDDVEGGFGRGGREMHRSQSWEERGDRRFEKPGRKESEVAPAHFPM
NHIRANYEDVGTGVGGLPVRKHDFTRSESENWRTSRDEANGEDGDEGGWRLAGAPRRDSD
RWCPPSPDGLRSAVRREVHLGEQPRQRRFPFDAREDERGYRRPRSGSGSLEEDGSSLPEW
CLEDAEEETGTFDSSGAFLSLKKAPKEPILEEAELDFRPLEECDEGLEEDGQPRETKNPD
REARRDPDRKQDVGRGVVEAPPAPSPPEPQPSAPLLPPSQPDGAEEPERPLERPPAPEHR
PEANKVPLNVPMSMPMSNTMLDSLPIPHTAAHTLTVSPVSAPSSTIQMQQKPPDVPVAMP
IPLPFSTSLMAQSTSIMTPNIMAPSTGLMAPIGRPTVMPPHHTMVEDERLKHFEQEAEKM
VAYLQDSDDRLAAKNSAPEPAGLPLTHEAALKWFYKDPQGEMQGPFSNPEMTEWFQAGYF
TMTLLVKRGCDEVFQPLGEIIKMWGRVPFAPGPAPPPLLGDAGDQERLKLQQELTALNLY
QLQQLQYQYLLRQQYAQALAQQKAQALSSAPHQQQQQQQQQINLLLQQYQALKMRSAEHT
TSESLLTPVTRSMSVPDSQGSVWEMQHPSSQVSCTPNIQQPAPSAWEGSSVWDLPIDSMA
QAPTIEQMQQLEKNKAAKVSPPHLLEMERREAELRAKREEEEKERKRLEEALRARQEAER
KRLEEELSRHKQEEELRQREQEEAQRRQKEEEERQAQEEALRRLEERRREEEERQQREEF
LRKQEEEHRKQEEERREEERRKQEDERRKHEEERRKQEELEALRRCEEEKRLEEEAVAAA
MALARQQQEEAKRREQEAVRQQELARQRQQQQEALRRLQQQQQQQQLAQMKLPSSSKWGQ
QSAVTAAAISQSQNALSLSEIQKVEEERERQAREEQRRQQAELLKLQQQQALQEALQPQA
KLSGWGSVAKQPAATKSLLEIQREEAQQVKQRKEQGGGSQQPSHPTVTQLNRAQNRATTA
LSSSVWGSVATSSMGGGAPNWGGESSSIWGDSTNSNMGFWDETPQPPPQAPPPARKPNAQ
KNNKANANLSSRANKKVEEEEKLLKLFQGVNKSQQDGFMQWCEQTLHTLNTANNLDVPTF
ASFLKEVDSPYEVHDYVRAYLGDTSEAKEFAKQFLERRAKQKANQQKEPQAPQNQQPTLK
QRQQQQDSVWGVSGTGSPSRYQSNHTSLQQQARFETVTSGKKKKKQKMVRADPSLLGFSV
NAASERLNMGEIETVEDF
NT seq
4377 nt
NT seq
+upstream
nt +downstream
nt
atggaggacatcaggtggattcatgtctgggtgccagaatccctaggtcctggagaacag
gagcagagtaaagggaaccgggaaggagacagacgtaaacaagcaaacacacaggttaaa
ttattatcagaagttctagaaagaatggcagaaactcagacactcaacttcggaccagaa
tggctccgggccctgtctgggggtggccatgggggtggtagcagcagtagcgttgccacc
tcaccaccactctctcctgcattgccaaagtataaacttgcggactaccgctacgggaga
gaagaaatgctagcactttatgtcaaggatagggagatccctgtagacttacatgataag
gattttctgcccattttacaagaggagcctctgccaccgctggcacttgtagcttttaca
gaggaagagcagagaaatttctccatgtctgtaaacagtgcagcagtgctcaggctgatg
ggaagaggaggaggcccggtggggccaggggcaccgaggggtcgaagcacttcacgggga
agaggacggggtagaggagatggagggttttaccaaagaagttttgatgacgtggaggga
ggctttggccgtggaggcagggagatgcaccgctcccagagctgggaggagaggggagac
agaaggtttgaaaagccaggtcgaaaagagtcagaagttgctcctgcccactttccgatg
aatcatatccgtgctaactacgaggatgttgggaccggcgtgggaggcctgcctgtgagg
aagcacgattttacacgttcggagagcgagaactggcgcacgtcccgcgacgaagcaaat
ggtgaggacggtgacgaggggggctggcgcctggcgggtgccccgcgacgcgacagtgac
cggtggtgccccccgagtccagacgggctgcggtcggcagtgcggcgagaggtgcacctg
ggggagcagccacggcagcgccggttcccattcgacgccagagaggacgagcgcggctac
aggcgtccccggtcaggcagtggcagcctggaggaggatgggagcagcctgccagagtgg
tgcttggaggacgctgaggaggagacgggcactttcgattcgtccggagccttcctctcg
ctcaagaaagctcccaaggagcccatcctggaggaggcagagctggacttcagacccctg
gaggagtgtgacgagggccttgaggaggacggacagccccgggagaccaaaaacccagac
agagaggcaagaagagaccccgacagaaaacaggatgtggggagaggggtagttgaggcg
ccgcctgctccctcgcctccagaaccccagccctccgcccctctgctgccccccagccag
cctgatggagcagaggagcctgagaggccacttgagcgacccccagccccggaacacagg
ccagaggccaacaaagtccccctgaatgtccccatgtcgatgcccatgtccaacacaatg
ctggactccctccccatcccccacactgcagcacacactctcacagtgtctccagtgtcg
gccccgtcgtccaccatacagatgcagcagaagcccccggacgtgcccgtggctatgccc
atcccgctgcccttcagcaccagcctcatggctcagagcacgtctatcatgacccctaac
attatggcccctagcacgggcctcatggctcctattggaaggcccacggtcatgccgcca
caccacaccatggttgaagatgagagactgaagcactttgaacaggaagcagagaagatg
gtggcgtatctacaggacagtgacgaccggctggctgccaagaactcagcacccgaacca
gccggcctgccgctcacacacgaggctgctctgaagtggttctataaagacccccaggga
gagatgcagggtccgttcagtaacccggagatgacagagtggttccaggcgggctacttc
accatgaccctgctggtgaagagaggctgtgacgaggtcttccaaccgctgggggagatc
atcaaaatgtggggcagggtccccttcgcccctggaccagcaccgccacccttactgggt
gacgctggggaccaggagcgtctgaaactgcagcaggagctgacagccctcaacctgtac
cagctgcagcagctgcagtaccagtacctgttgaggcagcagtacgcccaggccctggcc
cagcagaaagcccaggccctcagctcagcaccacaccagcagcagcagcagcagcagcag
cagatcaacctgctcctccagcaataccaggccctcaagatgaggtcagcggaacacaca
acatccgagagtctcttaactccggtgacgcggtccatgtctgtaccagactcccagggt
tctgtgtgggaaatgcagcacccctcctctcaggtctcttgcacaccaaacatccagcaa
cctgccccaagtgcatgggagggcagcagtgtgtgggatctgcccatagactccatggcc
caggcccccaccatagaacagatgcaacagctggagaagaacaaggctgctaaggtctct
cctcctcatctactggagatggagcggcgtgaggctgagctgagggccaagagggaagag
gaggagaaggagaggaaaagactggaggaagcgttacgggcccgacaggaggcggaacgc
aaacgcctggaggaggagctatcacgtcataaacaggaggaggagttgaggcagcgggag
caggaggaggcacagcgcagacagaaggaggaagaggaacggcaggcacaggaggaggct
ctccgcagactagaggaaaggaggagggaggaggaagagcggcagcaaagggaagagttc
ctccgtaaacaggaggaggagcaccggaagcaggaggaggagcgccgggaggaggagcgc
cggaagcaggaggatgagcgccggaagcatgaggaggagcgccggaagcaggaggagctg
gaggccctgaggaggtgcgaggaggagaagcggctggaggaggaggcggtggcggccgcg
atggcgttggcaaggcaacagcaggaagaggcgaagaggagggagcaggaggccgtgagg
cagcaggagctagccagacagaggcaacagcagcaggaggcgctccgccgactacagcag
caacagcagcagcaacagctagcccagatgaagctgccgtcgtcctctaagtggggccag
cagtcagcagtcacggcagcagccatctcccagtcccagaacgccttgtcgctctctgag
atccagaaagtggaggaggagagggaacgacaagcacgagaagagcagcggcgccagcaa
gcagagctcctaaagctccagcagcagcaggccctgcaggaggctctgcagcctcaggcc
aagctctctggttggggcagcgtggccaagcagccggccgctaccaagtccctgctggag
atccagagggaggaggcccagcaggtgaagcagaggaaagagcaggggggtgggagccag
cagcccagtcaccccaccgtcacccagttgaaccgcgcccagaacagagctaccactgct
ctgagttcctcagtgtggggctcggtggccaccagcagcatgggcggcggagctcctaac
tggggcggagaaagcagcagcatctggggcgacagcaccaactccaacatgggcttctgg
gacgagacgccccagcccccgccacaggctccaccccccgccaggaagcccaacgctcag
aagaacaacaaggccaacgccaacctcagcagtcgggccaataagaaggtggaggaggag
gagaagctgctgaagttgttccagggggttaataagagccagcaggatggcttcatgcag
tggtgtgagcagaccctgcacaccctcaacaccgccaacaacctggacgtcccgacattt
gcgtctttcctgaaggaggtggacagtccgtacgaggtgcacgactacgtgcgcgcctac
ttgggggacacgtctgaggctaaggagtttgccaagcagttcctggaacgccgtgccaag
cagaaggccaaccaacagaaagagccccaggccccacagaaccagcagccgactctcaaa
cagcgacagcaacagcaggattcagtgtggggcgtgagcgggacgggctctccgtctcga
taccagtcgaaccacaccagcctccagcagcaggcacgtttcgagaccgtcacctcaggg
aagaagaagaaaaagcagaagatggtccgggcagaccccagcctgctaggtttttctgtg
aacgcggcgtctgagaggttgaatatgggcgagatagagacggtggaggacttttaa
DBGET
integrated database retrieval system
