KEGG   Oncorhynchus gorbuscha (pink salmon): 124009522
Entry
124009522         CDS       T07892                                 
Name
(RefSeq) ras-related protein Rab-11B
  KO
K07905  Ras-related protein Rab-11B
Organism
ogo  Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:ogo00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    124009522
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ogo04131]
    124009522
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ogo04147]
    124009522
   04031 GTP-binding proteins [BR:ogo04031]
    124009522
Membrane trafficking [BR:ogo04131]
 Protein recycling
  Rab GTPases and associated proteins
   Rab GTPases
    124009522
Exosome [BR:ogo04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   124009522
  Exosomal proteins of other body fluids (saliva and urine)
   124009522
  Exosomal proteins of colorectal cancer cells
   124009522
GTP-binding proteins [BR:ogo04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab11/25 [OT]
    124009522
SSDB
Motif
Pfam: Ras Roc Arf MMR_HSR1 GTP_EFTU AAA_22 RsgA_GTPase AAA_14 PduV-EutP AAA_16 SRPRB ABC_tran NTPase_1 DUF3289 Csa3_N TniB Gtr1_RagA FeoB_N AAA_24 DUF6231 AAA_21 FAD-SLDH YtzH AAA_5
Other DBs
NCBI-GeneID: 124009522
NCBI-ProteinID: XP_046177338
LinkDB
Position
LG22:11025248..11038622
AA seq 217 aa
MGNRDDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTI
KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIM
LAGNKSDLRHLRAVPTDEARAFAEKNTLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQ
IAERSAHDESPGNNVVDISVPPTTDQKGNKLQCCQNL
NT seq 654 nt   +upstreamnt  +downstreamnt
atggggaacagagacgatgaatacgacttcttgttcaaagttgtgttaattggggactcg
ggcgtcggaaagagcaatttgctctctcggttcacacggaatgagttcaaccttgagagt
aagagcaccatcggagtggagtttgccacccgcagcatccaggtggatgggaagacgata
aaggcccagatatgggacacagctggacaggaacgttacagagccatcacctccgcctat
tacagaggggcagttggtgctcttctagtgtatgacatcgccaagcacttgacctatgaa
aacgtggagcgctggttgaaggaactgagggatcatgccgacaacaacatagtcatcatg
ctggcgggcaacaagagcgacctgcgccatctcagggccgtgcccacggacgaggcccgg
gcttttgcagagaagaacactctatcctttattgaaacttcagccttggattcaacaaat
gtagaagaagctttcaagaacatccttacagaaatctatcgcatcgtatcgcagaagcag
atcgccgagcggtctgcccatgacgagtcccctggaaacaatgtggtggacataagtgtt
ccacccaccacagaccagaaagggaacaaactgcagtgctgccagaacctgtaa

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