Oncorhynchus gorbuscha (pink salmon): 124009570
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Entry
124009570 CDS
T07892
Name
(RefSeq) vesicle-trafficking protein SEC22b-B-like
KO
K08517
vesicle transport protein SEC22
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo04130
SNARE interactions in vesicular transport
ogo04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
124009570
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
124009570
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ogo04131
]
124009570
Membrane trafficking [BR:
ogo04131
]
SNARE
VAMP, Ykt6, Sec22 (R)
Sec22
124009570
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Gene cluster
GFIT
Motif
Pfam:
Longin
Synaptobrevin
Sec20
Motif
Other DBs
NCBI-GeneID:
124009570
NCBI-ProteinID:
XP_046177433
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Position
LG22:complement(6411448..6416256)
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AA seq
287 aa
AA seq
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MFDLLTGCIVTHVPRSNESASRKLSTRCQHPHRATPASDLTAEATQPSLFEVFTQPAKTY
DSEVWIVEVSINMILLTMIARVADGLPLAASMQEDEQSGRDLQHYQSQAKQLCRKLNAQS
PNRCTLEAGVMSFHYVIEHGVCYLALCEAVFPKKLVFGYLEDLQTEFNEQHGKKVPTVSR
PYSFIEFDVYIQKTKKNYIDSRARRNLGSINTELQDVQRIMVANIEEVLQRGEALSALDT
KASNLSSLSKKYRSDAKYLNTRSIYAKIAAGAVFFITLIVYMRFWWI
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgttcgacctgctaactggttgtatagttacacacgtgccgcgttccaacgaatcagcg
agtcggaaattgtcaacgcggtgtcagcacccgcatcgcgctactccggcgtctgatttg
acagcagaagccacgcagccaagtttatttgaagtttttacacagccagcaaaaacatac
gactctgaagtgtggattgtagaggtttcaatcaatatgattttactgacaatgatcgct
cgagtagcagatggtctgccgcttgctgcatcgatgcaagaagacgagcagtcaggaaga
gacttgcaacattaccagagccaggctaagcagctgtgccgcaaactaaatgcccagagt
cccaatagatgtactctggaggctggggtcatgtccttccactatgtaatagaacatggc
gtgtgctacttggccttgtgtgaagctgtgtttcccaagaaactggtatttgggtacctg
gaagacctccaaacagaattcaatgaacagcatggaaagaaagtccccacagtctccagg
ccgtactctttcattgagtttgacgtgtacatccagaagacaaagaagaactacattgac
agcagggcacggaggaacctgggcagcatcaacacagaactgcaggacgtccagcgtatc
atggtggcaaacattgaagaggtcctgcaacgaggagaggccttatctgctctcgacacc
aaagccagcaatctgtccagcctttcaaagaagtaccgcagcgacgccaagtacctcaac
acgcgatccatctatgccaagatagcagcaggggcagtcttcttcattacactcatcgtc
tatatgcgtttctggtggatctga
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