Oncorhynchus gorbuscha (pink salmon): 124009590
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Entry
124009590 CDS
T07892
Symbol
amph
Name
(RefSeq) amphiphysin isoform X1
KO
K12562
amphiphysin
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
124009590 (amph)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ogo04131
]
124009590 (amph)
Membrane trafficking [BR:
ogo04131
]
Endocytosis
Clathrin-mediated endocytosis
Other core components
124009590 (amph)
Bin/Amphiphysin/Rvs (BAR) family proteins
N-BAR proteins
124009590 (amph)
Others
Actin-binding proteins
Nucleation-promoting factors (NPFs)
124009590 (amph)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAR
SH3_9
SH3_1
SH3_2
HD_3
Arfaptin
BRISC_FAM175B_helical
Motif
Other DBs
NCBI-GeneID:
124009590
NCBI-ProteinID:
XP_046177470
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All DBs
Position
LG22:1943467..2088820
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AA seq
784 aa
AA seq
DB search
MAEIKTGIFAKNVQKRLSRAQEKVLQKLGKADETKDDHFDQAVQNFKRQETEGSRLQREM
KAYLAAVKAMQQASMNLTESLHEVYEPDWHGKDDVLSIGKNCDVLWEDFHQKLVDSSLIT
LDTYLQQFPDLKIRVAKRSRKLIDYDSARHHLETIQAVVNRSDRKVSKAEDELKKAQKVF
DELNVDLQDELPTLWDSRVGFYVNTFKNVTNLEAKFHREISVLCKQLYEVMTKLGEQHSD
KMFTIQGAPSDSGPLRLSRAPSPPDSDSDESPVDTPNHMLAPASPGPPRPKSPSGQFKKG
PPVPPPPKTPTKELHQEQIIDLFGGQFLPAATPSQPNERPGESLLDLDFDPFQPDGNTTI
GQAAPPITQQLPWDLWTGNAEPVQPMDSGSMSTVGVEEDGGGGGEAPNTADFNPGFPAFP
EQAGDPSFATDWAADFGSAPAKGDSVPSATEAAASQVPATTGQDEAQGWPAADGWGGEAG
EAAAAEQPQGAETAAAGDEVTNNAFNGFPQMEATAPTFVADFDKLNESNVTMDPEAAAPP
AETAVAREATAETAVAPEVLGTETSDATEAGEIQEPASPTSEAEAAESATSPGEEKPDST
VGSPVTSAEPEGASPTEILPVEEAEKAFPSETAPPESVPTPEEMKESPVEETPEKMPIPS
VVIEPASSNEGDDDRDIIDISPTTISDNGVTADTQTAKDITTSDGPPGLPPGFLYKVETL
HDFEAANSDELELKKGDVVLVVPTATAEDQDAGWLTGIKESEWSHLGASAHKGLFPENFT
QRLE
NT seq
2355 nt
NT seq
+upstream
nt +downstream
nt
atggccgaaataaagacggggattttcgccaaaaacgtccagaaacggctaagcagggcg
caggaaaaggtactgcagaaactgggaaaggcggatgagacgaaagatgaccattttgat
caagccgtccagaacttcaagcgacaggagacggagggctcccggctgcagagggagatg
aaggcatatctggcggcagtgaaagcaatgcaacaggcttccatgaacctgacagagtcc
ctacatgaagtctacgagccggactggcacgggaaggacgatgtcttgagcatcgggaag
aactgtgatgtcttatgggaggacttccatcagaagctggttgattcttcacttatcaca
ctggacacgtacctgcaacagttccccgacctcaagatccgtgtggcgaaaagaagcaga
aagctaattgactacgatagtgcacggcaccatctggagaccattcaggcggtggtcaat
agaagtgatcggaaggtctcaaaggcagaggacgagttgaaaaaagcccagaaggtgttt
gatgagctcaatgttgatctgcaggacgagctaccaactctctgggacagccgagttggt
ttttacgtgaacacattcaagaacgtgacgaacctggaggccaaattccaccgggaaatc
tctgtgctctgtaagcagctctatgaagtgatgaccaagctgggagagcaacactctgac
aaaatgttcaccatacagggagcgcccagtgattcaggacctttgcgactctctcgggcc
ccttcgccaccggacagcgacagtgacgagagcccagtggacactccgaaccacatgctg
gcgcctgcctctcccggcccgccccggcccaaatctccttcaggccagttcaaaaaggga
ccaccagtgcccccgccacccaagaccccgaccaaggagctgcaccaggagcagataatc
gacctgtttgggggccagttcttacccgcggccacgccctcgcagccaaatgaaagaccc
ggagaatctctcctggatctggactttgatccattccagcctgacggcaacaccactatc
ggacaggctgcaccacccataacacagcaactaccctgggatttgtggacaggaaatgct
gaacctgtgcagcctatggattctgggtctatgagtactgtgggtgtggaggaggatggg
ggcggcggtggcgaggccccgaacactgccgactttaaccctgggttccccgcattcccc
gagcaggcgggagaccccagcttcgccaccgactgggctgctgacttcggctcggccccg
gcaaaaggagactctgtcccgtctgccaccgaggcggcagccagccaggttccagcgacc
acagggcaggacgaggcccaaggctggcctgcagcggacggctggggcggggaggcaggg
gaggcagcagcagcagagcagccacagggggccgaaacggccgcagctggagacgaggtg
accaacaatgcatttaacggatttccccagatggaagcaacagccccaacatttgttgcc
gattttgataagctgaatgaaagtaatgtcaccatggaccctgaagctgctgcgccccca
gctgagactgctgtggcccgggaggcaacagctgagactgctgtggccccggaggtcctt
gggactgagacctcagatgccacagaggcaggggagatccaggagcctgcttccccgact
agtgaggctgaggcagccgagagtgccaccagccctggagaggagaagcctgattccact
gtggggtctccagtgacatctgcagagcctgagggggcttcaccaactgagatcctccca
gttgaagaggctgaaaaagcattccccagcgaaacagctcccccggaatccgttccgacc
ccggaggaaatgaaggagtcccctgtggaggagactccggagaagatgcctattccctca
gtggtgattgagccagcctccagcaacgaaggtgacgatgaccgcgacattattgacatt
tccccaacgaccatcagcgacaacggagtgacagcggacacccagacggccaaagacatc
accacctccgacggcccaccaggactccctcctggcttcctttacaaggtggagactctg
catgactttgaagctgcaaactcagacgagctggagctgaagaaaggtgacgtggttctg
gttgttcccacggctacagcagaagatcaggatgcgggttggcttacaggtatcaaggaa
agcgaatggtcgcacctcggggccagtgcccacaaaggactcttcccagaaaacttcaca
cagcgcttggagtaa
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