Oncorhynchus gorbuscha (pink salmon): 124009632
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Entry
124009632 CDS
T07892
Symbol
lrrcc1
Name
(RefSeq) leucine-rich repeat and coiled-coil domain-containing protein 1 isoform X1
KO
K16475
leucine-rich repeat and coiled-coil domain-containing protein 1
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ogo03036
]
124009632 (lrrcc1)
Chromosome and associated proteins [BR:
ogo03036
]
Eukaryotic type
Centrosome formation proteins
Centriole proteins
124009632 (lrrcc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_4
LRR_8
LRR_9
LRR_6
LRR_NXF1-5
DUF3175
Motif
Other DBs
NCBI-GeneID:
124009632
NCBI-ProteinID:
XP_046177589
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All DBs
Position
LG22:11877550..11910225
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AA seq
1017 aa
AA seq
DB search
MADGELCLIDKSISSLLEVPLSANVTSLNLHCNRILKVEGLTTAWHLRHLDLSSNHISRI
EGLNSLASLRTLNLSCNLITKVEGLNGLVNLIRLNLAYNQISDLTGLLYLHGAQYKLRNL
HLHSNRLDSINQLLQCMLGLENLSDVTLSVEGAGNSVCSLPGYRELVLQSLPQVSSLDGV
DRLGNPAPLGEDSPIDIPGLENYVDFLLSSDTSANELARVDGSSTTSHIDEVLKQFRQRA
GGPVGAPDPVRRPQVSQPGWATAGSYSTAADPNNEQRIQKLEHQVSQLFQQTPAGEVSSS
STPFVKVRRPKRDIDNTSESECDSGKENRGRRSRIPTRHRGSNSTAVKRIIKQPTKAKQP
DSDQERSKGKSSKCSVVPGRKSGVHQAFGGADSIGPVRKTPSSTKQAVEETYRAIVEERD
QERERRWKAEQAVRKLTEQMKTLQTQASQEKDLQSMALHTTDRLKELLLKERSERSGLQA
RVEELDERCQSSALQLEQVLQREEQHKRALRSLEDSKSHSEARKARRQAEEMKRSQELEN
KASALMRELEIQRASLRQHKDKLRQLHELLASREQVHRKELEGRLVPGGAEFREMVAKEV
AGVEQRHAQSRAGLEDRLAQASQQYTALEDEFRMALTIEAARFTEVEQGCTRLSAELSEV
KAALSQTQQRERQAGGLVQELTAMVKEQKSRITELSKSKRDAVTELKGRMRSLEAGAEED
RRLQLQLELVKKDKARLLSQLTAQESVIDGLRAERRIWGQELAQQGASLSQDRGRLEARI
EVLAAELESQKKQNERDNDAVRIKVKVIDDQTETIRKLKEGLQERDEQGRRQREESLQAQ
RRLQQQLEESSATSQGLGDTVQQLSLRKEQLKQQLEDKEMELDEVKAAFSVSNKKWQDKA
DLLTRLESQVKRMKEGFDSKESLLLEERDKASQAHKAVVEKLHSMDDAFRRQLESLQASH
QTELLRLANDKQKRIEQSNQKVFQVEEEMRQLLEETETEKKTMEEKMRRLTSVLKDF
NT seq
3054 nt
NT seq
+upstream
nt +downstream
nt
atggctgatggagagctgtgtctgatagataagagcatatcaagtttgctggaggtccca
ttgagtgccaatgtcacatccctgaatctgcattgtaaccgtattctgaaagtagagggc
ttgaccactgcttggcatctccgacacttggatctgtcgtccaatcatatctctcgcatc
gagggcctcaactctctagcctcactgagaaccttgaacttgtcctgcaacttgatcact
aaggtcgaaggactgaatggacttgttaacctgataagattaaacctggcctataatcag
ataagtgacctcacaggtttgctgtaccttcacggggcgcagtacaaactgaggaacctc
catctccatagcaaccgcttggacagcatcaaccagctgctgcagtgcatgctgggactg
gagaatctgagtgatgtcaccctaagtgtggagggagcaggcaattcagtctgcagctta
ccaggttacagagagctggtgctccagtccttaccccaggtttccagcctggatggggtg
gaccggctggggaaccctgctcctctgggggaggacagccccatcgacatccccggcctg
gagaattacgtggacttcttgctctcctcagacaccagtgccaacgaactggctagggtt
gacggctcttccaccacttcccatattgacgaggtgctgaagcagttccgccagcgggca
gggggcccagtgggggccccagatccagtcagacggccccaggtttcacagccaggttgg
gctacagcgggcagctatagtacagcagcagacccaaacaatgaacagcgtatccagaaa
ctggagcaccaggtgtcccagctgttccaacagactcctgcaggggaggtctccagcagc
tccaccccctttgtgaaggtacggaggcccaagagggacatagacaacacgtcagagagt
gagtgcgatagcgggaaggagaaccgggggcgtcgctccagaatcccaactcggcacagg
ggtagcaacagtactgcagtgaagaggatcatcaagcagcccaccaaggccaaacaacca
gacagtgatcaagagagaagcaaagggaaaagttcaaagtgttcagttgtccctgggagg
aagtcaggcgtccatcaggcctttgggggtgccgactcaataggaccagtcaggaagact
cccagcagcaccaaacaagcagtggaggagacttatagggcgattgtggaggagcgtgat
caggagagagagaggcggtggaaggctgagcaggctgtgaggaagctgactgagcagatg
aagaccttgcagacccaggccagccaggagaaagacctgcagagcatggccctgcacacc
accgacagactgaaggagctgttgttgaaggagcgttcggaacgctctggtctgcaggct
cgcgtggaggagctagatgagaggtgtcagagctccgcgctgcagctggagcaggtcctg
cagcgggaggagcaacacaagagggcgctgcgcagcctggaggacagcaagtcccatagt
gaagcacggaaggcacgccggcaggctgaggagatgaagaggagccaggagctggagaac
aaggcgtcggccctgatgagagagcttgagatccagcgagcttcgctccgacagcataaa
gacaagctacggcagctccatgaactgctggcctccagggaacaagtgcacaggaaggag
ctggagggtcggctggtgccaggcggggcagagttccgggagatggtggccaaggaggtg
gctggtgtagagcagagacatgcccagagcagggctgggttggaggacagattggcccag
gcctcacagcagtacactgccctggaggacgagttccgtatggccctcaccatcgaggct
gctcgcttcactgaggtggagcagggctgtacccggctgagtgctgagctgtcggaggtg
aaggctgccctgtctcagacccaacagagagagagacaggcagggggtctggtgcaggag
ctcaccgccatggtcaaggagcagaagagccgcatcacagagctcagcaaatccaagcga
gacgccgtcactgagctcaagggccgtatgcggtctctggaggcgggggcggaggaggac
aggcgtctgcaactgcagctggagctggtgaagaaggacaaggccaggctgctgtcccag
ctcaccgcccaggagtccgttatagacggcctcagagctgagaggaggatctggggacag
gagctggctcaacaaggagcgtctctgtcccaggacaggggtcgtctggaggcgaggatt
gaggtgttggctgctgaactggagagtcagaagaaacagaacgagcgagacaacgacgcc
gtgaggatcaaagtcaaggtcatcgatgaccagacagagaccattcgcaaactcaaagag
ggcctacaagagcgtgacgagcagggccggaggcagcgcgaggagagcctgcaggcccag
cggcgcctgcagcagcagctggaggagtcgtcagccacatcgcagggcctgggagacact
gtgcagcagctcagtctccgcaaggagcagctcaagcaacagctggaggacaaggaaatg
gagctggacgaggtcaaggccgccttcagtgtgtccaataagaagtggcaggacaaggct
gacctgctgacccggctggagagccaggtgaaacgcatgaaggagggcttcgactctaaa
gagagcctgctgctggaggagagagacaaggcctcacaggcgcacaaagcggtggtagag
aagctacacagtatggacgatgcattccggcgacagctggaatcgctacaggcatcccat
cagaccgagctcctacggctggccaatgacaagcagaaacggattgaacagtctaatcag
aaggtatttcaggtggaggaggagatgcgtcagctcctggaggagactgaaactgagaag
aaaacaatggaggagaagatgagacgtctcaccagcgtattgaaagacttctaa
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