Oncorhynchus gorbuscha (pink salmon): 124009668
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Entry
124009668 CDS
T07892
Name
(RefSeq) probable ATP-dependent DNA helicase HFM1 isoform X1
KO
K15271
ATP-dependent DNA helicase HFM1/MER3 [EC:
5.6.2.4
]
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ogo03036
]
124009668
Enzymes [BR:
ogo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
124009668
Chromosome and associated proteins [BR:
ogo03036
]
Eukaryotic type
Meiosis-specific proteins
Others
124009668
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec63
DEAD
SNRNP200_wHTH
Helicase_C
ResIII
DEXQc_Suv3
Motif
Other DBs
NCBI-GeneID:
124009668
NCBI-ProteinID:
XP_046177654
LinkDB
All DBs
Position
LG22:complement(5645141..5676187)
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AA seq
1772 aa
AA seq
DB search
MLDSEDCTLSLDNLFFERPVVHKVKPLCQEQSSWQLEPPLSLSQIPATHDIQKEAEGLSS
FSFSQKSNKFLPPLKRAADGDGFTPKNNKLNQNTSDGRKEPEAQGWCALWAREDLMNKSQ
DTKKVRGQTKTPHESGHALEQKHFPLEFSQSPPLRRSLFKPPSGKVLNSSANSNGGLNQA
RPVVQQTFDQVSMATDPRLAKQSAAGSVPLTDLGPPTARGPPQETQDKGTKRAHVLPMTP
QPLHIQNTSGPGILRPISEIPAKFRSVFKEFPYFNYVQSKALDDVLYTGKNFVACAPTGS
GKTVLFELAIIRLLMETTEPWRNVKAVYMAPVKALCSQRFEDWKNKFGPLGLSCKELTGD
TEIDDFFEIQDANIIMTTPEKWDSMTRKWRDNCLLQLVRLFLIDEVHVVKDPMRGATLEV
VVSRMKAVHAYRAAENPQEDVSMRFVAVSATIPNTKDIADWLCDDRDPATCLEMDESHRP
VKLRKVVLGFPCNSNQTEFKFDLSLNYKMANIIQTYSDQKPTLVFCSTRKGVQQSATVLA
KDARFIMSIEHKQRLVNYANSLLDSKLRDLVSFGVGFHHAGVDVSDRKRIEEAFNVGDLP
VLFTTSTLAMGVNLPAHLVVIKSTTHYIGGACEEYSEADMLQMIGRAGRPQFDTSATAVI
MTKTQTKDKYMQFMNGAEIIESSLHTHLVEHLNAEIVLHTISDVNMALDWIRSSFLYIRA
LKNPRHYGFSTDLDRCGIEAKLQELCLKNLNSLASIGLISMDEDVNIKATEAGRLMARYC
VAFDTMKQFSKVTGTETLPELIELMAKGREFTDVQLRVNEKRTLNTLNKDKNRITIRYPM
EGKIKNNEMKVNCLIQAQFGSIPIQEFGLAQDTGRIFRNGVRISRCLAEFLNQRSKTDFS
ALLNSLILAKCFRAKLWEDSPYVSKQLEKIGLSLSTAMVNAGLTTFNKIEQTNPRELELI
VNRHPPFGNQIRDAVMNLPKYEVSLEQLPRYNIATAEIVVNVNVKNHEQLLSKRTTHDHH
YVTMIIGDCDNNVVFLQKLTDLMLLKSGNWSKKIKVAKAFKGEEISVNLISSEYVGLDIQ
QKFSAFYSGPKRYGGESFTPEQHDTVHIAQANAQRSQGATQRTQPTGQQTQATAQKRNST
STEKVPGKRQCNHFCKNKDQCGHDCCQNGVPVVLKRPMNQHSSFSSYLQDLKTRSDTLTE
TPVKRLKMRMSGRTGATNIQHFSYTPAACRFVGNHYGASTIQQSVESAEDFATPQEMAYL
ENYDHEYNDYLEDIYQTMGEEEPPPIQTPTESQSTSMWRKPSAYNGGSLSHSTPQSQGTG
YSQSHSTTQSQGTGYSQSHSTPQSQSTGYPQSHSTPQSQGTGYSQSHSTTQSQGTGYSQS
HSTPQSQGMGYLQSHSTPQSQGTGYSQSHSTTQSQSTGYLQSHSTPQSQGTGYSQSHSTT
QSQSTGYPQSHSTPQSQGTGYSQSHSTTQSQSTGYPQSHSTPQSQGTGYSQSHSTTQSQS
TGYPQSHSTPQSQGTGYSQSHSTTQSQSTGYPQSHSTPQSHSMGYSQSHFPLQNQSREET
QSHNTPQSQTSSYSTPQNQSRSYSPSPIVDLTDDSGFLSSSHTPSVTFDLGDEWDDFDDD
NLVHASETSCTTVANTQGIDRDKRKGHSTPLPSTYVQPKPRFTVSSAPLRSTSPVIPQIA
VASLSVRTHNLQASAPWSHSDNTATRTFSEPSVKAPSFPKQTDTSKAPLGGPFDFFSKTT
TPNNDNATGKRLQGEDNSKEVDAFMGIFDGLF
NT seq
5319 nt
NT seq
+upstream
nt +downstream
nt
atgttggactccgaagactgcactttgtccctggataacctcttctttgagaggccagtt
gtccacaaagtaaagccactttgtcaagagcagagttcttggcagttggaaccccctctg
tccctctcccagatcccagccactcatgacatccagaaagaggcagagggtctttcatca
ttcagtttctctcagaagtccaacaaattccttccccctttgaaaagagcagctgacggt
gatggtttcactcccaagaataacaaattaaatcagaataccagtgatggaagaaaagaa
cctgaggcacagggctggtgtgccctttgggctcgggaagacctcatgaataaatcccag
gataccaaaaaggttagaggtcaaactaaaaccccacatgagtctggtcatgcactggag
cagaaacatttccctctggagttcagccaaagcccacctctacggagaagtttgttcaaa
cctcccagtggtaaggtgttgaacagcagcgcaaactcaaacggaggcctcaaccaggca
cgacccgtagtgcagcaaaccttcgaccaggtttctatggcgacagatcctcggctggca
aagcagtcggcagcaggctccgtccccctcaccgatctgggcccgcctacagcccgggga
ccaccacaggagacacaggacaagggcaccaagagggctcatgttctccccatgacaccc
caaccccttcacatacaaaatacttctgggcctgggatactccgaccaatctctgaaatc
cctgctaaatttagatcggtcttcaaagagttcccttacttcaactacgttcaatcaaaa
gccctagatgacgttctatacacgggtaagaactttgtggcttgtgctcctacgggctct
ggtaagactgtgctttttgagttggccatcatccgcctactgatggagaccacagagccc
tggagaaacgtcaaagctgtgtacatggcccctgtcaaagctctatgcagccagcgcttt
gaggactggaagaacaaatttgggcctctgggcctgagctgcaaggagctgactggagac
acagagatcgacgacttctttgagattcaagacgccaatatcatcatgaccacacctgaa
aaatgggacagcatgacgaggaagtggagggataactgcctgctgcagttggtccggctt
ttccttattgatgaggtgcacgtggtgaaggaccctatgcgcggagccacactagaggtg
gtggtgagcaggatgaaggcggtccatgcctaccgtgcagcagagaaccctcaggaggac
gtctccatgagatttgtggccgtctccgccaccatccccaataccaaggatatagcagac
tggctgtgtgacgacagagaccctgctacttgtctggagatggatgagagtcacagaccg
gtaaaactgaggaaagtagtgctgggtttcccctgcaacagcaaccagactgagttcaag
ttcgacctgtcactcaactacaagatggccaacatcatccagacctactcggaccagaaa
ccaacacttgttttttgttcaacaaggaaaggagtccagcagtcggccactgttctggcc
aaggatgccaggttcatcatgagtattgagcacaaacaaaggttggtgaattatgcaaac
tctctcctggactcaaaactcagagacttggtgtcgtttggagttggtttccaccacgcc
ggagttgacgtgtcagacaggaagcgaatcgaggaggccttcaacgtgggagacctgcct
gtgctgtttacaactagtactctggcgatgggagtgaacctgccagcccacctggtggta
atcaagtccaccacgcactacatcgggggcgcctgtgaggagtacagcgaggccgacatg
ctgcagatgattggccgagcaggccggccacagtttgatacatcagcgaccgcagtgatc
atgaccaagactcaaaccaaagacaagtacatgcagttcatgaatggagcggaaatcatc
gaaagcagcctgcatacccacctggtggagcacctgaacgctgagattgtcctccacacc
atttcagacgtcaacatggccctggactggatccgctccagcttcctctacatccgagct
ctgaagaaccccagacactatggcttttccactgacttggaccgatgtggaatcgaagcc
aaactgcaagagctctgtctgaagaacttgaattccctggcctccattggtctgatctcc
atggatgaggatgttaacatcaaagctacagaggcaggcaggctgatggcaaggtactgt
gttgcgtttgacaccatgaagcagttcagcaaggtgacaggcactgagaccttacctgag
ctgatagaattgatggcgaagggcagagagttcactgacgtgcagctgagggtgaacgag
aagagaaccctgaacacgttgaacaaggacaagaacaggatcaccatcaggtatcccatg
gagggaaagatcaaaaacaatgagatgaaggtgaactgtttgattcaagcccagtttggc
tccattccaatccaagagtttggacttgcacaggacacagggagaatcttcagaaatgga
gtccgaatcagcagatgcttggcagagttcctgaaccagcgctccaagaccgacttctct
gctctactcaactccctgatactggccaagtgcttcagggccaagctgtgggaggactct
ccttacgtctcaaagcagctggagaaaatagggttgtctctgtcgacggccatggtgaac
gctggactcaccaccttcaacaagatagagcagaccaaccccagggaactggagctgatt
gtcaacagacatcctccgtttggaaaccaaatcagagacgctgtcatgaatctacccaag
tatgaagttagtttggagcagcttccaagatacaacatcgccaccgcagagattgtcgtg
aacgtgaatgtgaagaaccacgaacagctactgtcaaagagaaccactcatgaccaccac
tatgtcacaatgatcatcggggactgtgacaacaatgtggtcttcctgcaaaaactcaca
gacttgatgctgttgaagtcgggaaactggtcaaagaagatcaaagtggcgaaagccttc
aaaggagaggagatcagcgtgaatctaatcagctcagaatacgtggggttggacattcag
cagaagtttagtgccttctactctggaccaaagaggtacggaggtgaatcattcacacct
gagcaacatgacacggtgcacatagcacaggctaacgctcagagatcacagggtgcaaca
cagagaacacagccaacaggtcagcaaacacaggctacggcacagaagagaaactccaca
tccacagaaaaggttccaggcaaaagacaatgtaaccacttctgcaaaaacaaggatcag
tgtggccacgactgctgtcaaaatggtgtgccagtggttctgaagaggcctatgaatcag
cattcaagtttctcctcctacctccaagacctgaagaccaggagtgacacactgacagag
actccagtcaaacgcctcaaaatgagaatgagtggtaggactggggctacgaacattcag
cacttttcttatacgcctgctgcttgcaggtttgtaggtaatcattatggcgcttcaaca
atacaacagagtgtggaatcagctgaggactttgcaacgccccaagagatggcatatctt
gagaactatgaccatgagtataatgactacctggaagacatatatcagacaatgggagaa
gaggaaccaccacctattcaaacccctacagagtcacaaagcacttcaatgtggaggaaa
cccagtgcatacaacggagggtcactcagccacagcaccccccaaagccagggcacgggt
tactcccaaagccacagcactactcaaagccagggcacgggttactcccaaagccacagc
accccccaaagccagagcacgggttacccacagagccacagcaccccccaaagccagggc
acgggttactcccaaagccacagcactactcaaagccagggcacgggttactcccaaagc
cacagcaccccccaaagccagggcatgggttatctacagagccacagcaccccccaaagc
cagggcacgggttactcccaaagccacagcactactcaaagccagagcacgggttaccta
cagagccacagcaccccccaaagccagggcacgggttactcccaaagccacagcactact
caaagccagagcacgggttacccacagagccacagcaccccccaaagccagggcacgggt
tactcccaaagccacagcactactcaaagccagagcacgggttacccacagagccacagc
accccccaaagccagggcacgggttactcccaaagccacagcactactcaaagccagagc
acgggttacccacagagccatagcaccccccaaagccagggcacgggttactcacaaagc
cacagcactactcaaagccagagcacgggttacccacagagccacagcaccccccaaagc
catagcatgggttactcccaaagtcatttcccccttcaaaaccagagtagggaggaaacc
cagagtcacaataccccccaaagccagactagcagttacagcactccccaaaaccagagc
aggagttactctccgagtcccatcgtagacttgaccgatgacagtggcttcctctcgtcg
tcacacacccccagcgtgacctttgacctgggagacgaatgggatgattttgacgacgac
aacttagttcacgccagtgagacatcatgcaccactgtagctaacactcaggggattgac
cgtgacaagcggaaaggtcactcaacaccactaccatccacttatgtacaacccaaaccc
cgcttcactgtgtccagtgccccactcaggtcaacctccccagttattcctcagatagca
gttgctagtctctcagtcagaacacataacctccaggcttctgctccctggagccactct
gacaacacggccacaaggacattcagtgaaccctctgtgaaagcaccctccttcccaaaa
cagactgatacaagcaaggctccgctgggaggaccgtttgatttcttctcaaagacgact
accccaaacaatgacaatgcgactggcaaaaggctccagggagaggacaacagcaaggaa
gtggatgcattcatgggtatatttgatggattattttag
DBGET
integrated database retrieval system
