Oncorhynchus gorbuscha (pink salmon): 124009751
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Entry
124009751 CDS
T07892
Name
(RefSeq) pre-mRNA-splicing factor 38B-like isoform X1
KO
K12850
pre-mRNA-splicing factor 38B
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
124009751
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ogo03041
]
124009751
Spliceosome [BR:
ogo03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
124009751
Complex C
U4/U6.U5 tri-SnRNP related factors
124009751
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRP38
Motif
Other DBs
NCBI-GeneID:
124009751
NCBI-ProteinID:
XP_046177852
LinkDB
All DBs
Position
LG22:38613291..38622197
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AA seq
507 aa
AA seq
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MANNTVAGNQQQGQAVNKIGPNPGKHGNNLPLWGNEKTMNLNPMVLTNVLSSPYFKVQLY
ELKTYHEVVDEIYFKVTHVEPWEKGSRKTAGQTGMCGGVRGVGTGGIVSTAFCLLYKLFT
LKMTRKQVMGLITHNDSPYIRALGFMYIRYTQPPADLVDWYDGFLDDEEELDVKAGGGCV
MTIGEMVRSFLTKLEWFSTLFPRIPVPVQKMIDTQMKARPRKVPEKVEEPVEPVPEEGRV
TEGRRRSRSPRRSPKRSRSRSHHRERERHGPSFDRELERERDRQRKEREGKDGDRRGGDR
ERERGEKERDRGGERERRRSRSRERKGERKDREKEREGGGENDRSRRKDRGNDRGRERSK
DKRSKGETEDRRHKEERDERRGHREERKAKRSSRSRSRERRHKEKSKKRGEVQEESGSKS
RAEVGEKEKSRAEVGEKEKSRKRERSHERGEGEQRSHKRSRSKERSHRPREPSNGKAHGK
HRERRRSQSMDRGERTTQRAQEEPEHG
NT seq
1524 nt
NT seq
+upstream
nt +downstream
nt
atggccaacaacactgtagccgggaatcagcaacaaggacaggctgtgaacaagattggc
cctaaccctggaaaacatggcaacaacttgcctctctggggaaacgaaaagactatgaac
ttgaaccctatggtcctcaccaacgtgctctcatctccatatttcaaggttcagctctat
gaactgaaaacctaccatgaggtggtggatgaaatatatttcaaggtgactcatgttgag
ccctgggagaaaggcagcaggaagactgctggacagactggaatgtgcggaggggtgcgt
ggagtcgggacaggcggcattgtgtccacggccttctgcctgttgtataagctgtttacc
ctcaagatgacccgcaagcaggtgatgggactgataactcacaacgactcgccctacatc
agagcacttggtttcatgtacataagatacacccagccccctgctgacctggtggactgg
tatgatggtttcctggatgatgaggaggagctggatgtgaaggccggaggcggctgtgtt
atgaccatcggtgagatggtccggtcgtttctcaccaagctggagtggttctccacactt
ttcccacgcatcccggtgcctgtgcagaagatgattgacacacagatgaaggcaaggccc
cggaaggttcctgagaaggtggaggagccggttgaacctgtgccagaggagggacgggtg
acagaagggcgtagacgctcccggagccccaggaggtcccccaaacggtcgaggagcagg
agccaccaccgcgaacgagagcgccacggcccaagcttcgaccgcgagctggaaagggaa
cgtgaccgccagaggaaggagagggagggtaaggacggggacaggagaggaggggacagg
gagagggagagaggggagaaagagagggacaggggaggagaaagggagaggcgacggtcc
aggagcagggaacgcaagggagagcggaaagacagggagaaagaaagggaggggggcggg
gagaacgacagaagcaggaggaaagacaggggcaatgacagagggagggagaggtccaag
gacaagaggagcaagggagagactgaggacaggagacacaaagaagagcgggatgagagg
agggggcacagggaggagaggaaggccaagcgctccagtcggagcagaagcagggaaagg
agacacaaggagaagtccaagaagagaggagaagtccaagaagagagtggaagcaagagc
agggccgaggtgggggagaaggagaagagcagggccgaggtgggggagaaggagaagagc
aggaagagagagcgcagccatgagaggggggagggcgagcagcgctcacacaaacgcagc
cgcagcaaagagcggagccaccggccacgagagcccagcaacgggaaagcccacgggaaa
caccgagagcgcaggaggagccagagcatggatagaggagagaggacgacacagagagcg
caggaggagccagagcatggctag
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