Oncorhynchus gorbuscha (pink salmon): 124009887
Help
Entry
124009887 CDS
T07892
Name
(RefSeq) dynein, cytoplasmic 1, intermediate chain 2a-like isoform X1
KO
K10415
dynein cytoplasmic 1 intermediate chain
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo04145
Phagosome
ogo04814
Motor proteins
ogo05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
124009887
09142 Cell motility
04814 Motor proteins
124009887
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
124009887
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ogo03036
]
124009887
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ogo04812
]
124009887
Chromosome and associated proteins [BR:
ogo03036
]
Eukaryotic type
Centromeric chromatin formation proteins
SAC (spindle assembly checkpoint) factors
Motor proteins
Dynein complex
124009887
Cytoskeleton proteins [BR:
ogo04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dyneins
124009887
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40
WD40_Prp19
Beta-prop_EML
WDR55
WD40_WDHD1_1st
Dynein_IC2
Beta-prop_RIG_2nd
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_IFT140_1st
Beta-prop_WDR19_1st
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_C
Beta-prop_HPS5
Beta-prop_EIPR1
ANAPC4_WD40
Beta-prop_SPT8
WD40_MABP1-WDR62_2nd
Beta-prop_IP5PC_F
WD40_RFWD3
Beta-prop_DCAF4
CAF1A_acidic
Motif
Other DBs
NCBI-GeneID:
124009887
NCBI-ProteinID:
XP_046178067
LinkDB
All DBs
Position
LG22:complement(35766302..35785609)
Genome browser
AA seq
656 aa
AA seq
DB search
MADKQDKSELKAELERKKQRLAQIREEKKRKEEEKNKKKDGSDSKRGGEGGAAGAPDSSD
LEKKRREAEALLQSMGIAPDITNAQPLRVITEDTCLFHYLVPAPMSPSAKSMCSETGSQD
SGDGNSRTLHWDPDPSTLQLHSDSDLLGRGLRLGMAKVTQVDFPPKQSVSYSKETQTPTC
TQTHTQAKPAEEEEEEEMAEPKPAEESQEEKADQEEKQEEVTPKDLTEEEKMQLLHSEEF
MAFFDRGSRIVERALSERVDVCFDYSGRDLEDKEGEMQAGAKMSLNRAFSDERWSKNRVV
TCLDWSPQYPELLVASYNNNEEAPHEPDGVALVWNMKFKKTTPEYTFHCQSAVMSAAFAR
FHPNLVVGGTYSGQIVLWDNRSNKRTPVQRTPLSASAHTHPVYCVNVVGTQNAHNLISIS
TDGKMCSWSLDMLSQPQDSLELVFKQSKAVAVTSMAFPLGDVNNFVVGSEDGSVYTACRH
GSKAGISDVFEGHHGPVTGLSCHSAGGPVDFSHLFISASFDWTVKLWTTKSTRPLYSFED
SCDYVYDVMWSPTHPALFACVDGSGRLDLWNLNNDTEVPSASVCVNGSPALNRVRWAHSG
REIATGDSDGQVLVYDVGEQICVPKADEWTRLVHTLVEINENRDEGEELAAQRLVA
NT seq
1971 nt
NT seq
+upstream
nt +downstream
nt
atggcagataaacaggataagagtgagctgaaggcggagctggagaggaagaaacaacgc
ctggcacaaatcagagaggaaaagaagagaaaggaggaggagaagaacaagaagaaggat
gggtctgactctaagcggggaggggaggggggtgcagctggggcaccagactcgtctgac
ctggagaagaagaggagagaggctgaagctctactgcagagcatggggatcgcccctgat
ataaccaatgcccagcctctgagagtaataacagaggatacgtgtttgtttcactatcta
gtccccgcccctatgtctccctcagccaaatcaatgtgcagcgagacaggaagccaggac
tctggagatggaaactctaggacgttacactgggatcctgacccctctactctgcagctg
cactctgactccgacctactggggcgtggtttgaggcttggcatggcaaaggtgacccag
gtggatttcccacccaaacagtctgtgtcctactccaaggagacacagacccccacctgt
acacaaacacacacacaggccaaaccagcggaggaggaagaggaggaggagatggctgag
cccaagccagcagaggagtcccaggaggagaaagctgatcaggaggagaagcaggaagaa
gtcactcccaaagatctgactgaagaggagaagatgcagcttctccactcggaggaattc
atggcgttcttcgatcgagggagcaggattgtggaacgggctctgtctgaacgagtagac
gtctgctttgactacagcggccgagacctggaagacaaggagggtgagatgcaggcgggg
gctaagatgtctctgaacagggcgttctctgacgaacgttggtccaagaacagggtggtc
acctgtctggactggtctcctcagtaccctgagctgctggtggcctcctacaacaacaac
gaggaggctcctcatgagcctgacggagtggctttggtctggaacatgaagttcaagaag
acaacacctgaatacaccttccactgccagtctgcagtgatgtcagcagcgttcgccagg
ttccatcctaacctggtcgtgggtgggacttactcaggccagatcgtcctatgggacaac
aggagcaacaagagaacacctgtacagagaactcctctttctgcatctgctcacacgcac
ccagtgtactgtgtgaacgtggtggggacccagaatgctcacaacctcatcagcatctcg
actgatggaaagatgtgctcctggagcctggacatgctgtctcaaccacaggacagtctg
gagctggtgtttaagcagtctaaggcagtagcagtgacctccatggcttttccgctgggt
gatgtgaacaactttgtggtcgggagtgaagatggatcagtctacaccgcctgccgtcac
gggagtaaagcaggtatcagtgatgtatttgagggacatcatggtccggtcactgggttg
agctgtcacagtgctgggggtcctgtggatttctcccatctgttcatctctgcatccttc
gactggaccgtcaagctgtggaccaccaagagtacccgtcctctgtattcatttgaggac
agctgtgactatgtgtatgatgtcatgtggtctcccacacaccccgccctcttcgcctgt
gtagacggatctggacgcctggacctgtggaacctcaacaacgacacagaggtgcccagt
gcaagtgtgtgtgtgaatgggtctcctgctctgaaccgtgtgcggtgggctcactcaggg
agagagatcgctacaggagactcagacggacaggtgctggtgtatgacgtaggggagcaa
atctgtgtgcccaaggcagatgaatggacccgtttggtacacacgctggtggagatcaac
gagaaccgtgatgaaggagaggagctggccgcgcagcgcctagtcgcctga
DBGET
integrated database retrieval system
