Oncorhynchus gorbuscha (pink salmon): 124009970
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Entry
124009970 CDS
T07892
Name
(RefSeq) protocadherin-8-like
KO
K16499
protocadherin delta 2
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ogo04515
]
124009970
Cell adhesion molecules [BR:
ogo04515
]
Cadherins
Protocadherins
124009970
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_CELSR2_9th
TMEM154
Motif
Other DBs
NCBI-GeneID:
124009970
NCBI-ProteinID:
XP_046178195
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Position
LG22:34058761..34063306
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AA seq
1003 aa
AA seq
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MCMRGWNWWVLVGIPLAVLPTLTQGKTVKYETFEEDAPATVIGNLAKDISSSPSSGSKTN
FRMMKQFNSSFIRLRESDGQLTIGERIDRERICKHTLHCLVAFDVVSFSKEQFKLIHVEV
EVKDINDNSPEFPRKESSLEISENTVVGTRIPLDFAVDEDVGVNYIQSYQISVNSHFTID
VLSRADGVKYAELVLMKELDRETQSSYALQLVAMDGGNPSRTGSTRINIKVKDYNDNSPL
FDRSSFTVDLPEDAPVGFLLLDLNAEDPDEGLNGEVVYGFGHQVPSEIRQLFRVDRKTGR
LTLESPIDFESKKTYEFNVQAADLGLNPSPAICKIVVRVQDVNDNAPEISITPMTSITAG
IAYITEAASRESFVALVSTSDMDSGANGQVHCTLYGHDHFRLQQAYEDSFMIVSTSPLDR
EKIPEYNLTVVAEDLGSPPFRTITQYTIRLMDENDNAPVFSKSAYEVAVVENNTPGAYIT
TVVARDMDLGHNGKVIYKLADTYVTGSPVSTFVSLDPASGSIYALRSFNYEVMKQLELCI
TASDGGSPPLTGTASIHVRIVDQNDNAPVINQPALNNGSSEILLPRDAPSGYVITRVEAR
DADEGVNAELSYRLASGEGSVFSVSKATGEVYLNRELSHDVDETLRMTVTVSDNGRPALT
ATATLHFLIIVGAPPNDRTVYWAGSGEHAQWDLSVVIIIVLAGSCTLLLLAIILIATTCS
RRKRDKTGDDTDSYGEKESLERGKNISDNPLLPLHGTVGGFEAHTFSSQPGFTGGHTGSS
DLCSTSEDGREAPCVYEPDSKPKGYSTLPGYGNSYNNGKEAVRPITIWKGNSYTTISARD
PAFSGKDSGKGDSDFNDSDSDISGTDLKKEGVQVHPMGCHSGLWACTSECKVLGHSDRCW
SPSAVRAHIGPSLVPTPTSQTVSSFNSFSKTASLPRDSLRRDNYYQAHIPKTTGLQSVYE
KVLHKEYDYVLVTPPRPLRVQEISDITIPVYSPTTTRCPSNEV
NT seq
3012 nt
NT seq
+upstream
nt +downstream
nt
atgtgtatgagagggtggaactggtgggtgctggtgggcatcccactggctgtcctgccc
actctcacgcagggaaagacagtgaagtacgagacatttgaggaagacgccccggcaact
gtcattggaaacttggccaaggacatttcatccagcccctcctccggctccaagacaaat
ttcaggatgatgaaacagttcaactcgtcttttatccgtttgagggagagcgacggacag
ctgactatcggagagagaattgacagagagagaatctgtaaacacacccttcactgcctc
gtcgcctttgatgtggtaagcttttccaaagagcagttcaaactcatccacgtcgaggta
gaggtcaaggacatcaacgacaattcccccgagtttccacggaaagagtcgagtctggag
atctccgaaaacacagtggtgggcacgcggatcccgttagacttcgctgtggatgaagat
gtgggggtgaattacatccagagctaccagatctccgttaacagtcacttcaccatagac
gtgctcagcagagccgacggggttaaatatgcggagctcgtgctcatgaaagagctggac
cgtgagacacagtcttcctatgcgctccagctggttgctatggacggtggcaacccgtcc
cgcacgggatccacgcgcatcaacatcaaggtgaaagactacaatgacaacagtcccttg
ttcgacaggagcagttttacagtggacctccctgaggatgcaccagtagggtttctctta
ctggacctgaacgcagaagacccggatgaggggctgaatggggaggtagtgtatggtttt
ggtcaccaggtgccatccgagataagacaacttttcagagtagaccgcaaaacgggaagg
ctcaccctcgagagccccattgactttgagagcaagaaaacgtacgaattcaatgtccag
gcggctgacctgggtctgaacccaagcccggccatctgtaagatagtggtgcgggtccag
gacgttaacgacaacgctccagagatctccatcactcctatgacgtccatcacggcggga
atcgcctatatcacggaggctgcatcgcgcgagagttttgtagcgctggtcagcacctct
gacatggactctggagctaacggacaggtgcactgtacgctctatggccacgaccacttc
aggctgcagcaggcgtacgaggacagcttcatgatagtgagtacgagcccgttggaccgg
gagaagatccctgagtataatctaacagtggtggcagaggacttgggctccccaccgttc
agaaccatcacccagtacaccatccggttgatggacgagaatgacaatgcccctgtgttc
agtaaatcggcgtatgaagtggctgtggtggagaataacaccccgggggcctacatcacc
acggtggtcgccagggacatggacttgggacacaacgggaaggtgatctacaagctcgct
gacacctacgtcacgggctccccggtgtctacgttcgtctcactggaccccgcgagcggc
tccatttacgcactcaggagcttcaactatgaagtcatgaaacagctcgaactctgcatc
acagccagcgacggtgggtccccgcccctcaccggaaccgcaagcattcatgtcaggata
gtggaccagaatgacaacgcacctgtcatcaaccagcccgcactaaataatgggtcctct
gagattctgctgccccgggacgcaccctcaggctacgtcatcacccgggtggaggcgcga
gatgctgatgagggcgtgaacgcagagctgtcctatagactggcatctggagagggttcc
gtgttctccgttagcaaggccaccggagaggtctacctcaaccgcgagctcagccacgat
gtggacgagaccctgcgtatgaccgtcactgtgagtgacaatgggagacctgcgctcacc
gccaccgccacgcttcatttcctcatcattgtgggcgccccgccgaatgacaggacggtg
tactgggcaggcagcggggagcacgcacagtgggacctgtcagtggtgattatcatcgtc
ctcgcggggagctgcacgctcctgctgttagccatcatcctcatcgccaccacctgcagc
cggcggaaacgggacaagactggagatgacaccgactcgtacggggagaaggagagtctg
gaaaggggcaagaacatcagcgacaatccactgctgcctctccatggaaccgtgggaggg
tttgaagctcacaccttctctagccagcccgggtttactgggggacacactggcagcagc
gacctgtgctccacctctgaggatgggagagaggcaccatgcgtctacgaaccggacagc
aaacccaagggctactccactctgcccggctacggtaacagctacaataatggtaaagag
gcagtcagaccaatcacaatctggaagggcaactcctacaccaccatctccgcgagagac
cccgcgttcagcgggaaggacagcgggaaaggcgacagtgactttaacgacagtgacagt
gacatcagtggcaccgacctgaagaaggagggggtacaggtacaccccatgggctgtcac
agtggtctatgggcatgtaccagtgagtgtaaggttctgggccactctgaccgctgctgg
agcccctcggctgtccgtgctcacattggtccctcactcgttcccacccccaccagccag
actgtctcctccttcaacagcttttccaagactgcctcgctgccccgggactcgctccgg
agggataactattaccaggcgcacatccccaaaacaacgggcctgcagagcgtgtatgag
aaggtactacataaggaatatgactatgtcctggtcactcctcccagacccttgagagtt
caggagattagtgacatcactatcccagtctatagtcccaccacaacacggtgtcccagc
aatgaagtctaa
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