Oncorhynchus gorbuscha (pink salmon): 124009995
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Entry
124009995 CDS
T07892
Name
(RefSeq) partitioning defective 3 homolog isoform X1
KO
K04237
partitioning defective protein 3
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo04144
Endocytosis
ogo04517
IgSF CAM signaling
ogo04520
Adherens junction
ogo04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
124009995
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
124009995
09144 Cellular community - eukaryotes
04520 Adherens junction
124009995
04530 Tight junction
124009995
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ogo01009
]
124009995
Protein phosphatases and associated proteins [BR:
ogo01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
124009995
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Par3_HAL_N_term
PDZ
PDZ_6
Motif
Other DBs
NCBI-GeneID:
124009995
NCBI-ProteinID:
XP_046178243
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All DBs
Position
LG22:complement(16589693..16846968)
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AA seq
1375 aa
AA seq
DB search
MKVTVCFGRTRVVVPCGDGNIKVHTLIQQAVMRYKKAIAKDASYWLQVHRLEHGDGGILD
LDDLLSDVADDKDRLVAVYDEQDPHHGGDGTSASSTGTQSPDLFATELNSSNMSAFQPYQ
AASEIEVTPSALRSNMPLHVRRSSDPALATINGPFSDPRVTLPPEKPSRKNPTRWSTTAG
FLKPRRSVGGTGTGTGTNSLERKGNGPDTYRSLPRDAGTCANQREFQRETARSSLSANHP
MVDRWLERREQDEEEENSRIEPIGRADSCMDHTPLRSLDDIVKLVEVSNDGGPLGIHVVP
FSARDRRTLGLLVKRLERGGKAQEQGLFQENDCIVRINNGDLRNIHFEQAQNMFRQAMRS
PVIMFHVVPNLMKAQYEQLSHSERNPNVAYSSGRFSPDSLASERGSTTSGLDHTPQSRGP
HPHPHPEQGDAYTPLPHPHGGSMGKPPSGHAPSPHRVLNSTPTAGFTKKVGRRLNIQLKK
GPEGLGFSITSRDVPIGGSAPIYVKNILPRGAAIQDGRLKAGDRLLEVNGVDLVGRTQEE
VVALLRATPMGGAVGLVVLRQEETFLNAEPQMQSPRDLVEEDDLVLTPDGTREFLTFEIP
LSDSGSAGLGVSVKGNRSKENHADLGIFVKSIINGGAACKDRRLRVNDQLIAVNGESLIG
KTNQEAMETLRKSMSVEGNKRGTIQLIVARRVTKRSELEAPGSPLGPEQTLLNCSLLDDR
ERRISHSLYGGIEGLDDNLMPQQALMGRMMGNYQLSPTVNMPQDDTVIIEDDRPPVLPAH
LSDQSSSSSHDDMGFHVEVPPTWAKDTPIQNESTLSPDDTDPDGAFQREGFGRQSMSEKR
TKQFGDASQLEIIKTRKSKSMDLVADEINLTPRKENTPGSSTRDVGPSLGLKKSSSLESL
QTAVAEVTLNGDMPFHRPRPRIIRGRGCNESFRAAIDKSYDRPAATEEDDEGMETLEEDT
EESSRSGRDSVSTVADLTPLPNTERPLANGNRANEDKKKDKGGKDKKKPDRDKEKDSKNR
AKKGMLKGLGDMFRFGKHRKDGEKLERKGRLEELQASEEETLRMKLEQERIQAKTRELRE
RQARERDYAEILDVNLSRDEEHPYAGIGPLDTSLDSRPQSPRDNHHQDSSLYTQVSKTRN
ANGRPPSADSNRLAPSNHDRIQRLRHEFQQARGDDDPDDRRRTYSFEQPWPNNTNTGPYQ
TDGQQTGRHSVSVEVQRQRQRQEERDAFQQAQRQYSSLPRQPRKNPSSISQDSWDKVYPP
GDGFQTAKENPRYSSYKGSRNGYPGMSGVNARVLLEAQELLRQEQRRREQEAKGKQLLLA
PPQEHPGNNTYDGYSAHKDSVSPKGPYRQDVPPSPSQLARLNKLQGPEKGRPFYS
NT seq
4128 nt
NT seq
+upstream
nt +downstream
nt
atgaaagtgacggtgtgttttggaaggactagggtggtggtaccgtgcggagatggaaat
atcaaagtccatactctcatccagcaagccgtcatgagatacaaaaaagccattgcaaag
gatgccagctactggttacaggtgcaccggttagagcatggggacggaggtattctagac
ctggatgacttgctgtctgatgtggctgatgacaaagaccggctggtggctgtgtatgat
gaacaggaccctcaccatggaggcgacggcaccagcgcaagctccacgggaacccagagc
cccgacctgttcgccacagagctcaactccagcaacatgtccgctttccagccctaccag
gccgccagcgagatagaggtcactccgtccgcccttcgatccaatatgcccctccatgtg
cgtcgcagcagtgacccggccctggcgacgatcaacggtccgttcagcgacccccgcgtg
accctgccgccagagaaaccgtccaggaagaaccccacccgctggtccaccacggctggc
ttcctcaaaccacggcgctctgtaggaggcactggcactggcaccggcaccaatagcctg
gagagaaagggtaatggtccggacacgtaccgtagtctcccccgggatgcaggcacgtgt
gccaaccagagagagttccagagagagacggcccgctcctccttgagcgccaaccacccc
atggtagaccgctggctggagagacgggagcaggatgaggaggaggagaacagcaggatc
gagccgattggccgagctgattcctgtatggaccacacccctctgcggtccctagatgac
attgtaaagctggtagaagtctccaatgatggcgggcccttggggatccatgtagtacct
ttcagtgcccgggaccgcaggactctaggcctgttggtcaagcgcctggagaggggaggc
aaggcgcaggagcagggtctgttccaggagaacgactgcatcgtacgcattaataatgga
gacctgcggaacatccattttgaacaagcccagaacatgttccgccaggccatgcgttcc
ccggtcatcatgttccacgtggttcccaacctgatgaaggcccagtacgagcagctgtca
cacagcgagaggaaccccaacgtggcctactcctctggacgcttcagccccgactctcta
gctagcgagagaggcagcaccacctcaggcctggaccacaccccacagtcccgtggtccc
catccccaccctcacccggagcagggagacgcctacacccctctaccccacccccatggg
ggctccatgggcaagcccccatccggacacgccccctcccctcacagggtgctaaactca
acccccacggcgggcttcaccaaaaaggttggcaggagactcaacatccagctcaagaaa
ggtccagagggtctgggtttcagcatcacttcgcgcgacgtccccatcggcggctcggcg
cccatctacgtgaagaacatcctgccccgaggagctgccatccaggatggacgcctcaag
gctggagacaggctgctggaggtgaatggagtggacttggttggtcggacccaggaggaa
gtggtcgctctgctgagggccacgcctatgggaggagctgtggggctggtggtgctacga
caggaggagaccttcctgaatgcagagcctcagatgcaaagccccagagatttggttgag
gaggatgacctggtgttgacccctgacggtaccagggagttcctgacctttgagatccct
ctgagtgactcggggtcggccggtttaggggtcagcgtcaagggcaaccgttccaaggag
aaccatgctgacctaggcatcttcgtcaagtccataatcaatggaggagctgcctgcaag
gatagacggctgcgggtcaacgaccagctgatagcggtgaacggcgagtcattgataggc
aagaccaatcaggaggccatggagacgctaaggaagtccatgtcggtggagggcaacaaa
cgtgggacgattcagctgatagtggccaggagggtcaccaaacgcagtgagctggaggcc
cctgggagccccctgggaccggagcagaccctcctgaactgctccctgctggacgacagg
gagcgtcgtatctcccactccctgtacggaggcatagagggcctggacgacaacctgatg
ccacagcaggctctgatgggcaggatgatgggtaactaccagctctccccaacggtcaac
atgccccaggacgacactgtcatcatcgaagacgatcggccacctgtacttcctgcccac
ctctctgaccaatcgtcttccagttcccatgacgacatggggttccatgtggaggtccct
ccaacttgggccaaagatactccaattcagaatgagagcaccctgagccctgatgacacc
gacccagacggagcctttcagagggagggtttcggcagacagagcatgtcagagaaacgg
acaaagcagtttggagatgccagtcagctggaaatcatcaagacacgcaagtccaagagc
atggatctagtagccgacgagattaacctcacccctcgcaaagagaacacaccagggtct
tccaccagggacgtgggtccctcccttggcctcaagaagtccagctctctggagagttta
cagaccgccgttgccgaggtgacgctcaacggtgacatgcccttccacaggccacgccca
cgcataatcagggggcggggctgtaacgagagcttccgggccgctattgacaagtcttac
gacaggccagcagccaccgaggaggacgacgagggcatggagacattggaggaggacacc
gaggagagctctcggtccgggcgcgactctgtgtccactgtggcagacctgaccccactg
cccaacacagagagaccgctggccaacggcaaccgcgccaatgaagacaagaagaaggac
aaaggtgggaaagacaaaaagaagccagaccgggacaaagagaaggacagcaagaacagg
gctaagaaaggcatgctgaaaggactgggcgacatgttcaggtttggaaaacaccgcaag
gacggagagaaactagagcgcaaagggaggctggaggagctgcaagcctcagaagaagag
acactgaggatgaaactagaacaggagaggatccaggctaagacccgggagctgcgggag
cgccaggcacgggagagggactacgctgagatcctagatgtcaacctgagccgagacgag
gagcacccctacgcaggcatcgggcccctggacacgtccctggacagccggccccagagc
ccccgagacaaccaccatcaagattcctccctgtacacacaagtcagcaaaacccgcaat
gcaaatggacgccctccctccgccgacagcaacagactagcgcctagcaaccacgaccgg
atacagcggctgagacacgagttccagcaggccaggggagacgacgaccctgacgaccgg
agacgcacctacagcttcgagcagccctggcccaacaacaccaacacaggcccgtaccag
acagacggacaacagacaggccgacactctgtgtctgtagaggtgcagagacagagacag
aggcaggaggagagagacgccttccaacaggcgcagagacagtacagctccctgccacgg
caacccaggaagaaccccagctccatctcgcaggactcctgggacaaggtctacccgccg
ggtgatggcttccagacggccaaggagaaccctcgctactctagctacaagggctccaga
aacggctacccggggatgagcggtgtgaatgcccgcgtcctcctggaggcccaggagctg
ctgaggcaggagcagagacgcagggagcaggaggccaaagggaagcagctactgctagcg
cccccgcaggaacaccccgggaacaacacctatgacgggtactcggctcacaaggactct
gtgtcgcctaagggcccctatagacaggacgtacccccctcgccctcccagctggccagg
ctcaacaagctacaggggcccgagaagggaaggcccttctactcctga
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integrated database retrieval system
