Oncorhynchus gorbuscha (pink salmon): 124010012
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Entry
124010012 CDS
T07892
Symbol
rpap2
Name
(RefSeq) putative RNA polymerase II subunit B1 CTD phosphatase rpap2
KO
K20827
RNA polymerase II-associated protein 2 [EC:
3.1.3.16
]
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ogo01009
]
124010012 (rpap2)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ogo03021
]
124010012 (rpap2)
Enzymes [BR:
ogo01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
124010012 (rpap2)
Protein phosphatases and associated proteins [BR:
ogo01009
]
HAD phosphatases
Fcp/Scp phosphatases
124010012 (rpap2)
Transcription machinery [BR:
ogo03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
124010012 (rpap2)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RPAP2_Rtr1
Motif
Other DBs
NCBI-GeneID:
124010012
NCBI-ProteinID:
XP_046178272
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All DBs
Position
LG22:complement(5620726..5631298)
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AA seq
672 aa
AA seq
DB search
MENVPRKRVARSSKPGKRDGKSVKEAQAAAEEARRREAVRETLREKLDLEKRALQVVERL
LEDSVADDFLVDCARLITAANYKDTVEERSIVKLCGYPVCSNKLGKVSTQQFKISTKTNK
VYDITERKSFCSNFCYKASKSFELQISKSPLWLRQHESPPDVKLMKKGDGGSTGEEVRLA
ERRLREDDVENPLPLDSVSSEAPEDPRRSPTAGHSDDSDAEHDFVSSVVSQRRGPRVHWG
DLPKRTVEGEGREPGEGEDRERRSGGKDTTVPKQIQTNEAEDQENTEESQKAQRKPSNGT
DGRQQHTTDTNHQSEQQSFLGERGSPEGQSMEEAAELLSQVTIQDRDPATATSSALTAYS
VQNQEPAPNPSPRGDPAQPTQPGINITQVGMSRRGAQGLRGLLKGHEAGTKPVSVRLNLL
EGLRRTFTEWMTEETMKFLYGPDHFSKTLIETKEEEEEELDEDDLEDIVKDGGEGRETDS
QVGPGRPLAPAPDYDTLRRETEEMGLRVREFYEGTKEVQRLSGKQHARGGDSENQGGALP
LVDSHAQHLIQKRITVEKLTKGLRDIVGPLRLTMTDVSSDLNRLVRTFRFTNTNIIHKGP
EWTLIAVVLLHLLSEVSPVVREALERPASVDYLSTLMQELPLLDRDLQSLVQLLRTAELC
PHEHTEKRQTNQ
NT seq
2019 nt
NT seq
+upstream
nt +downstream
nt
atggagaacgtcccacgaaaaagagtcgctcgctcttcaaaaccaggcaaaagggatggg
aagagtgtaaaagaagcacaggccgctgcagaggaagcaagaaggagagaggcagtgagg
gagaccctgagagagaagctggatctggagaagagggctctgcaggtggtggagcgtctc
ttggaggacagcgtagcagacgacttcctggttgactgtgcaaggttaatcactgctgcc
aattacaaagacacagttgaggagaggtccattgtgaagctgtgcggttatcctgtctgt
tcaaacaaactgggcaaggtctccactcaacagttcaaaatttccaccaaaaccaataaa
gtctatgacatcacggaacgcaagagcttctgcagtaacttctgctacaaagcctccaag
tcctttgagctgcagatatcaaagagccctctgtggctgaggcagcacgagagcccccca
gatgtgaaattaatgaagaaaggagatggcggtagcaccggagaggaggtgaggctggct
gagagacgtctcagagaggacgatgtggagaacccccttcccttggactccgtgtcctcc
gaggccccagaggaccccaggcgctcccctacagccggccacagcgacgacagcgacgca
gaacacgactttgtctcaagcgtggtctcccagcgacggggacccagggtgcactggggc
gatctgcccaagcgcaccgtcgaaggggagggtagggaacctggagagggggaggacagg
gagagaaggtcgggagggaaggacacaacagtgcccaagcaaatacaaacaaacgaggcg
gaagaccaggagaatacagaagaatcacagaaagcacaaaggaagccaagcaatgggaca
gatggacgccaacagcacaccacagatacgaaccaccagagtgagcagcaatctttcctg
ggagagagagggtcgccagagggccagtctatggaggaagctgcagagctattgagccaa
gttacaatacaggatcgagacccagccacagctacgtcttctgcactaacagcctacagt
gtacagaatcaagaaccagctccaaaccccagtccacggggggacccagcacagcccacc
cagcctggcatcaacatcacccaggtgggcatgagcagaaggggagcccaggggctccgg
gggctcctcaagggccacgaagccgggactaaacctgtctcggtccggctgaaccttcta
gaaggcctaaggaggaccttcactgaatggatgactgaggagactatgaagttcctatat
ggcccagaccactttagtaaaacactgatagaaacaaaggaggaggaggaagaggagcta
gatgaagatgacttggaggacattgtgaaggatggtggggagggacgtgagactgactcc
caagtgggtccaggaaggcccttggccccggccccagactacgacaccctacgcagggag
acagaggagatggggctgagggtgagggagttctacgaagggacgaaggaagtccagcgg
ttgtcagggaaacaacatgccagaggcggagactcagagaaccagggtggggcactcccg
ttggttgactcccatgcccagcacctcatccagaaacggattacagtggagaagctcact
aaaggcctgagagacatcgtgggtcctctgcgtctcaccatgactgatgtctccagtgac
ctcaacaggctggtcagaaccttcaggtttacaaacaccaacatcatccacaaaggccca
gagtggaccctgattgcagtggtgctcctccatttgttatcagaggtgtccccagtggtg
cgggaggccctggagaggccggcctcagtcgattacctctctactctgatgcaggagctc
ccactgctggaccgggacctgcagagcctggtccagctactcagaaccgcagagctctgt
ccacacgagcacacagaaaaacggcagacaaatcaatga
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