Oncorhynchus gorbuscha (pink salmon): 124010129
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Entry
124010129 CDS
T07892
Name
(RefSeq) lactosylceramide 1,3-N-acetyl-beta-D-glucosaminyltransferase A-like
KO
K03766
beta-1,3-N-acetylglucosaminyltransferase 5 [EC:
2.4.1.206
]
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo00601
Glycosphingolipid biosynthesis - lacto and neolacto series
ogo01100
Metabolic pathways
Module
ogo_M00070
Glycosphingolipid biosynthesis, lacto-series, LacCer => Lc4Cer
ogo_M00071
Glycosphingolipid biosynthesis, neolacto-series, LacCer => nLc4Cer
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00601 Glycosphingolipid biosynthesis - lacto and neolacto series
124010129
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
ogo01003
]
124010129
Enzymes [BR:
ogo01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.206 lactosylceramide 1,3-N-acetyl-beta-D-glucosaminyltransferase
124010129
Glycosyltransferases [BR:
ogo01003
]
Glycan extension
Type 2 chain/Poly-N-acetyllactosamine
124010129
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Galactosyl_T
Fringe
Orthopox_A43R
Motif
Other DBs
NCBI-GeneID:
124010129
NCBI-ProteinID:
XP_046178449
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All DBs
Position
LG22:complement(6745231..6760076)
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AA seq
387 aa
AA seq
DB search
MFVNFRRIRKCQCVQLMTTCLVLSVVMVCWEQLDSGMVSHINSYSYRYLVNSYTFINKSF
TIPRQEAHMFSNHRYLLNHPYKCSGEKDILLLLLIKSSPENFERRRAIRSTWGNETYIRQ
DLGVTVKVMFVLGLPKQHETAQTWRGRSGGIQHSLVDEDRRHGDMVQQDFVDTFHNLTLK
LLLQFRWAHFYCPHARFLMTADNDIFVHMPNLVRYLRDTDRKGVTDFWIGHVHRGAPPIR
QKESKYYVPQELYPWASYPDYTAGAGYVVSRDVADKIYQASLTLNASLYIDDVFMGICAN
AMGVSPQEHVYFSGEGKAPYHLCIYDKMMTSHGHVADIYELWEAATNPEVKRVTSGLFGR
LYCTAVKLTLLCRPYFFNTYPCKAALL
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atgtttgtgaatttccggcggatccgcaagtgccagtgcgtgcagttgatgaccacatgc
ctggtgctgtcggtggtgatggtatgctgggagcagctggacagtggcatggtgagccac
atcaactcctactcttaccgctacctggtcaacagctacactttcatcaacaagagcttc
accatcccacgacaggaggcccacatgttcagtaaccaccgctacctactcaaccacccg
tacaagtgttcaggagagaaggacattttactgcttctgctcatcaagtcctccccggag
aacttcgagagacggcgagccatacggtcgacgtggggcaacgagacctacattcgccaa
gacctgggggtgacggtgaaggtgatgtttgtgctgggccttcccaagcagcatgagacg
gcccagacgtggagggggaggagcggaggcatccagcacagccttgtcgatgaggaccgc
aggcatggcgacatggtccagcaggactttgtggacacgttccacaacctcaccctcaag
cttctgctacagttccgctgggctcatttctactgcccgcatgcccgattcctcatgacc
gctgacaatgatatcttcgtgcacatgcccaacctggtgcgctacctgcgagacacggac
aggaagggcgtgacggacttctggatcggtcacgtgcacagaggcgcgccaccgatccgc
cagaaggaaagcaagtactacgtcccgcaagagctgtacccttgggcgtcatacccggac
tacacggcaggggccggttacgtcgtctcgagagacgtggcggacaaaatctaccaggcc
tcattgacgctcaatgcctcgctgtacattgacgatgtcttcatgggcatctgtgccaat
gccatgggcgtgtcgccacaggaacacgtgtacttctcaggcgaaggcaaggcgccctac
cacttgtgcatctacgacaagatgatgacatcgcacggccacgtggccgacatttatgag
ctctgggaagccgccacaaacccggaggtcaaaagggtcacatcgggactttttgggagg
ttgtactgcacggcagtgaaactcacccttctgtgcagaccctacttcttcaacacctac
ccctgcaaggcagccttattgtag
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