Oncorhynchus gorbuscha (pink salmon): 124010462
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Entry
124010462 CDS
T07892
Name
(RefSeq) SLIT and NTRK-like protein 2
KO
K25833
SLIT and NTRK-like protein 2
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
124010462
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
LRR_14
LRR_9
LRRNT
LRRCT
MCLC
LRR_LRWD1
Motif
Other DBs
NCBI-GeneID:
124010462
NCBI-ProteinID:
XP_046178863
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Position
LG23:23244027..23247801
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AA seq
853 aa
AA seq
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MLNSVLLLSVLTVTSFSSKTESRKTSKDICKNRCSCEEKENILSINCENKGFTTVSLFQP
PPNKICQLFLNGNFLSRLNPNEFVSYGNVTSLHLGNNGLQEIKTGAFTGLRFLKRLHLNN
NNLEIIKEDTFAGLESLEYLQADYNYISAIEAGAFGKLNKLKVLILNDNLLLSLPNNVFR
FVMLTHLDLRGNRLKMLPFAGVLEHIGGIMEIQLEENPWNCTCDLIPLKAWLDTISVFVG
DIVCETPFRLHGKDITQLIKQDLCPRRNAGDSNHRAMQPPSDSQYHGLSPTQHPGVTPTK
TPRASRPPKTRNRPTQRVTSSKDKQVFGPIMVYQTRSPVPMTCPSICVCTSQNPDSGLNI
NCQERKLHNITELTPKPSYPKKLHLTGNYLQTIYRTDLTEYSSLELLHLGNNRIAVIQNG
AFENLANLRRLYLNGNYIESLSQSLFAGLQSLQYLYLEYNVIKDILPQTFNSLHNLQLLF
LNNNLLRSLPDNVFGGTMLTRLNLRNNHFSHLPVRGVLDQLSAFIQIDLQENPWDCTCDI
VALKNWMELSSTSVVVNEITCDSPSKHAGRLLRSLRNDAICPEPNEITITKAPTVRPSTD
STPPSAITPTDEQVPEMHAEVPLSVLILGLLVVFILSVCFGAGLFVFVLKRRKGADSVPA
SANNVDLNSFQVQYGSYNTEPTADKTETHVYNYIPPPVGQMCQNPIYMQKDSEQVAYYRN
LKELSFSTMDTKTSELPPSPYTISTVEFIEKQSCGNREPELLYQNIAERVQELPTVGALN
YNFCTLPKRQFIPQYETTRRHNQDRLNKTVLYGTPRKYYANQSKNEHPVLPGKLKTEPDY
LEVLEKQTAMSQL
NT seq
2562 nt
NT seq
+upstream
nt +downstream
nt
atgctgaacagcgttttgttgctcagcgttttaactgtgaccagtttctcctcgaagact
gagagtcgcaaaacttcgaaagacatttgtaagaaccgctgctcatgtgaggaaaaggag
aatatattgagcatcaactgtgaaaacaaaggatttacaacggttagtctatttcaaccc
ccaccgaacaaaatctgtcaactctttctcaatggaaactttctttcaaggctgaatcca
aacgagtttgttagttatggtaatgtgacatcacttcatctggggaacaacgggttacag
gagataaagactggagcttttactggactgagatttttaaaacgacttcatctcaataac
aataacttggaaataatcaaggaggacacatttgctggtttagagagtttggagtattta
caggcagattataattacatcagcgccattgaagcaggtgcattcggcaaattgaataaa
ctcaaagtattgattctcaatgacaacctcctgctctctcttcccaacaatgtatttcgt
ttcgttatgttaacgcatttggatctaagggggaaccggcttaagatgttgccttttgct
ggcgtgctggagcatataggtggcattatggagatccaactggaggagaacccgtggaac
tgcacctgtgatctgatccccctaaaagcctggctggacaccatatcagtctttgtaggg
gacatcgtgtgcgagaccccattcagactgcatggcaaggacattacgcaattgattaag
caagatctatgcccccgacgcaatgctggtgattccaatcaccgcgcaatgcagcctccc
tctgattcccaataccacggcctttctcccacccaacaccccggtgtcactccaacaaaa
accccaagggcctcccgtccccctaaaacgagaaatcgccccacacaaagggtaacgtct
agtaaggacaaacaagttttcgggcctataatggtttatcagactaggtcccctgttccc
atgacctgccctagcatttgcgtatgcacctctcagaacccagacagtggattaaatata
aactgccaggagaggaaattgcataatataacagagcttacccctaaaccgtcctatcca
aagaaattgcatttaacaggcaattacttgcagaccatatacagaacagaccttaccgaa
tatagctcactagagctcctccacttaggaaataatagaatagctgtcattcagaatggg
gcctttgaaaacctagctaatctacggagactttacctcaatggcaattacattgaaagt
ctatcccaatcattattcgcagggctgcagagccttcaatacttatacctggagtataat
gttatcaaggacattttaccacagacgtttaactccttacataatctgcagctgctgttc
ctaaacaacaatctactgagatcccttcccgacaatgtttttggaggaactatgctgaca
agactaaacctgagaaacaatcacttctcccacctgcccgtgcgcggtgtgctcgaccag
ctctccgcattcattcagatcgacctgcaggaaaacccatgggattgcacctgcgacatc
gttgcgcttaaaaactggatggagctatccagcaccagcgttgtggtaaatgaaatcaca
tgtgattcgccctccaaacacgcagggcggctcctcaggtctctgcgtaacgatgcaatt
tgtcccgagcctaacgagatcacaataaccaaggcccccaccgtcagacccagcactgac
tccactcctccttctgccatcacgcccacagacgagcaggtgcccgagatgcatgcggag
gtgcccctgtcggttctcatacttggactgctcgtggttttcattctgtcggtctgcttc
ggggctggtttgttcgtatttgtcctgaaacgacgcaaaggtgctgatagcgttcccgcc
agtgccaataatgtagatttaaactccttccaggtacaatatggttcttataacacagaa
cccactgcagataaaacagagacgcatgtgtataactacatccctcccccagttggtcag
atgtgtcagaaccccatctacatgcagaaagatagcgagcaggtggcctactataggaat
ctaaaggaactaagcttcagcaccatggacactaaaacgtcggagttgcccccaagtcca
tataccataagcacagtggagttcattgagaaacaatcttgcggcaatcgagagccggag
ctgctttatcaaaacattgcagagagggttcaggagcttccgactgttggggctctgaat
tataatttttgcactttaccgaaaagacaattcattcctcaatatgaaaccactagacga
cacaaccaggacaggttgaataaaacggttctctatgggactccacgaaagtattatgcc
aatcaatcaaaaaatgaacaccctgtgctgcctgggaagctaaaaacagaaccagactac
ctcgaagttctggaaaaacaaactgcaatgagtcagttgtaa
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