Oncorhynchus gorbuscha (pink salmon): 124010493
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Entry
124010493 CDS
T07892
Symbol
lman2
Name
(RefSeq) vesicular integral-membrane protein VIP36 isoform X1
KO
K10082
lectin, mannose-binding 2
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
124010493 (lman2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ogo04131
]
124010493 (lman2)
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
ogo04091
]
124010493 (lman2)
Membrane trafficking [BR:
ogo04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
ER-Golgi intermediate compartment (ERGIC) proteins
124010493 (lman2)
Lectins [BR:
ogo04091
]
L-type lectins
124010493 (lman2)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Lectin_leg-like
Lectin_L-type_dom
Motif
Other DBs
NCBI-GeneID:
124010493
NCBI-ProteinID:
XP_046178935
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Position
LG23:complement(9915778..9933832)
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AA seq
347 aa
AA seq
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MVSFIGRVSKMRGFCTFISRSLLFLFLHFTLVQCDITDGNAEHLKREHSLMKPYQGVGSS
PSSQWDFWGSTLVTSSYVRLTPDERSRQGSIWNTVPVYLKDWEMHVQYKIHGSGKKNLHG
DGIAIWYTKERLHPGPVFGNQDHFVGLALFVDTFRNDLHGMDRSFPYIYAIVNNGSLPYD
HGNDGRNSELGGCSSEIRNKDHDTYLAIRYSKGRLTVMIDIDDKNEWKECIDIGGVRLPT
GYYFGASAATGDLSDNHDIISMKMYQLMVEHSPDEDSLDWTKIEPSVSLLKSPKDNIDDP
TGNFRSTPLTGWKVFLLLLCALLGIVVCGVVGAVVFQKRQERNRRFY
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
atggtgtctttcataggccgagtgagcaaaatgagaggtttttgtacatttatcagcagg
tcactgcttttcctattccttcactttactctagtgcaatgcgatataacagacggcaat
gcagagcacctaaagcgggagcattcgctcatgaaaccgtaccagggtgttggaagcagc
ccgtccagtcagtgggacttctgggggagcacgctagtcaccagctcgtatgtgcgcctg
acacctgatgagagaagtagacagggatccatatggaacacagtgcctgtttatctgaaa
gactgggagatgcacgtgcagtacaagatccacgggtcggggaagaagaatctccatggt
gacggcatcgccatctggtacacgaaggagagacttcatccaggcccagtctttggaaac
caagatcattttgttggcctggctttatttgtggataccttccgcaatgatctccatggg
atggatcgttccttcccttacatctatgccattgtgaataatggttctctgccctatgac
catgggaatgatggacgtaactctgaactgggaggctgctcttctgagatcaggaacaaa
gaccatgacacctatctggccatccgttattccaagggtagactcacggtgatgattgac
attgatgataagaatgaatggaaagagtgcattgacatcgggggtgtccgcctccccacg
gggtactactttggggcttctgctgctacaggagatctctctgataaccatgacatcatc
tctatgaagatgtaccagctgatggtggaacattcacctgatgaggacagtctggactgg
accaagattgagccaagcgtcagcctgctgaagtcccccaaagacaacattgatgatcct
actggtaacttccgaagcacgcctcttactggctggaaggtcttcctgcttctgctatgt
gctctactgggaattgtagtttgtggtgttgtaggggctgttgtatttcagaagcgccag
gaaagaaacaggagattttactga
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