Oncorhynchus gorbuscha (pink salmon): 124010532
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Entry
124010532 CDS
T07892
Name
(RefSeq) LOW QUALITY PROTEIN: mediator of RNA polymerase II transcription subunit 12-like
KO
K15162
mediator of RNA polymerase II transcription subunit 12
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ogo03021
]
124010532
Transcription machinery [BR:
ogo03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
CDK-module
124010532
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Med12-LCEWAV
Med12-PQL
Med12
Motif
Other DBs
NCBI-GeneID:
124010532
NCBI-ProteinID:
XP_046179009
LinkDB
All DBs
Position
LG23:44166271..44254629
Genome browser
AA seq
2155 aa
AA seq
DB search
MMAAFGILSYEHRPLKRPRLGPPDVYPQDPKQKEDELTALNVKQGFNNQPAVSGDEHGSA
KNVNFNPSKISSNFSSIIAEKLRYNTFPDTGKRKPQVNQKDNFWLVTARSQSSINNWFTD
LAGTKPLTQLAKKVPIFSKKEEVFGYLAKYTVPVMRSAWMIKMTCAYHAAITETKVKKRH
VIDPCIEWTQIITKYLWEQLQKVAEFYRQSPSQGCGSPLPATSAEVDTAMKQWEYNEKLA
MFMFQDGMLDRHEFLTWVLECSEKVRPGEDELLKLLLPLLLQYLGEFVQSAYLSRRLAYF
CTRRLNLLLSDGSLGPGAGGHPAHSILAQPGNVLPPMPTSQPAGGNQPQTPFTDFFICPQ
HRPLVFGFSCMLQSIMLCCPSALVWHYSLTDSRNKTGSPLDLLPISPSNLPMPGGNGTFT
QQVRAKVREIEEQVKDRGQAVEFRWSFDKCQETTAGFTIGRVLHTLEVLDNHSFEKSDFS
NSLDSLYNRIFGSGQNKDGHEMSPDDDAVVTLLCEWAVCCKRSGRHRAMVVAKLLEKRQA
EIEAERCGESEVVDEKGSVSSGSLSAATLPVFQDVLLQFLDTQAPVLTEPSNESERVEFS
NQVLLFCELIRHDVFSHNIYMCTLISRGDLASDSHLPRPRSPSDEPSDESERKEAGSSVK
NEDTGLSESMEIDHNSSTNFDEMFSPPMHCESKGSPSPEKTAQDPAFPLVYEQPRHIQYA
THFPIPQEESASHECNQRLVVLYGVGKQRDEARHAIKKITKDILKVLNRKSTAETGGDEG
QKRKRSKPEAFPTAQDIFSKFQHLSHFDQHQVTSQVSRNVLEQITSFALGMSYHLPLVQH
IQFIFDLMEYSLNISGLIDFAIQLLNELSLVEAELLLKSSSLVGSYTTGLCLCIVAVLRR
YHSCLILNPEQTAQVFDGLRIVVKSGVNPADCSSAERCILAYLYDLYTSCSHLKSKFGEI
FSEFCSKVKNSIYCNIDPSDSNMLWDPVFMMEAIANPSAHNFNHSMVGKILNDSPANRYS
FVCNVLMDVCVDHRDPERVNDIGILCAELTAYCRSLSAEWLGVLKALCCSSNNGNCGFND
LLCNVDVSDLSFHDSLATFVAILIARQCLLLEDLVRCVAIPSLLNAACSEQDSEPGARLT
CRILLHLFKTPQHNPCPQDGAKSDKSSVGIRSSCDRHLLAYSQNSIVVGAVFAVLKAVFM
LGDAELKGSGFSHPAGLDDDDIGSKKSGGHTASIETASLDMYAKYVLKSICQQEWVGERC
LRSLSEDSSALQDPVLVNIQAQRLLQLICYPHRQLDSEEGDNPQRQRIKRILQNMDQWTM
RQSSLELQLMIKQSTNNELYSLLENIATVTIEVFQKSAEMNSNNPSGNSSAGAGSSTSNS
NNTSKMKPVLSTSERTGVWLVAPLIAKLPTSVQGHVLKAAGEELEKGQHLGSSSRKERDR
QKQKSMSLLSQQPFLSLVLTCLKGQDEQREGLLTSLYSQVQQIVTNWREDQYQDDCKAKQ
MMHEALKLRLNLVGGMFDTVQRSTQQTTEWAVLLLDIISSGTVDMKSNNELFTTVLDMLS
VLINGTLAADMSSISQGSMEENKRAYMNLVKKLRKELGDRQSESLEKVRQLLPLPKQTRD
VITCEPQGSLIDTKGNKIAGFEKEGLQVSNKQKISPWDVFEGLKHSAPLSWGWFGTVRVD
RKVTKFEEQQRFLLYHTHLKPKPRSYYLEPLPLPPEEEEPPTPMPQELEKKMVEALKPEK
SVPVVSSDVTKKKPKKKKTPSTSKTEDFVTRTQGGVPYGTGLPPEILMGQQTHPYNRLGY
SQQAMSMYAQNQPLPPGGPGLDTPYRPARNPQMGKMMPTRPNYPGVMPGGMPGMMGMEKQ
YPMGYKPQPNIPQGQILRQHLQVRLNQSIIGQQMRQMTPNQQYGSVQPTQNISQGYTTYG
SHMGMQPHPSQVGGIVPPSYGNQGFQGSHPGTNQGVVDSLRQMVQRPSGYVHQQAPGYSH
TMQNTQRFPHQSIHQAPVMQGLSHMGTQGVHPGMRPNQMLAEQQQAQQQQQQYLRQQALR
AQQQAQQQAQQQQQVQQQQVQQQHQVQPQQVQQQQQQQQQQQQQVASAPPSGAQAQNQAL
GMQPMPPQQPMFPRQGMQQTQMQQTQQQQQTAALVRQLQQQLSNTQPGQNTNSYY
NT seq
6468 nt
NT seq
+upstream
nt +downstream
nt
atgatggctgcttttgggatcctgagttacgaacaccggccactgaagcggccacgactc
ggacctccggacgtttatcctcaagacccaaagcaaaaagaggatgaattgactgcgttg
aatgtgaagcaaggatttaataatcaaccggcagtgtcaggggatgaacatggaagtgct
aaaaatgtcaactttaatccctcaaagattagttcaaatttcagcagcatcattgcagag
aagctgcgctacaacacatttccagacacaggcaaacggaagccgcaggttaaccagaag
gacaatttctggctcgttactgccaggtcacagagctctatcaacaactggtttacagat
ttggccggaactaaaccactcacccagctggcaaagaaggtgccgatctttagtaaaaag
gaggaggtttttggctacttggccaagtacacagtacccgtgatgcgctcagcatggatg
atcaagatgacctgtgcgtatcacgccgccattacagaaacaaaagtcaagaagcggcac
gtgattgacccctgcatagaatggactcagatcatcacaaagtacctgtgggaacagttg
cagaaggtggctgagttctaccgccagtctcccagccagggctgtggctctcctctcccg
gccacctcggccgaggtggacacggccatgaagcagtgggagtacaatgagaagctggcc
atgttcatgttccaggatggcatgctagacagacacgagttcctcacgtgggtgttggaa
tgctccgagaaggtccgacctggagaggacgagcttctgaagctgctactgcccctcctg
ctacagtacttaggggaatttgtgcagtcggcctacctgtcccggaggctggcctatttc
tgcacacgacgcctcaacctgctgctaagtgacgggagcctggggcccggcgccggggga
cacccagcccacagcatcctggcacagccagggaacgtcctgccccccatgcctacctcc
cagcccgcagggggcaatcagccccagaccccatttacagacttcttcatctgccctcaa
cacaggcccttggtgtttgggttcagctgcatgctacagagtattatgctgtgctgtccc
agtgccctggtgtggcactactctctgacagatagccggaacaagactggttccccactg
gacctattgcccatctccccctccaacctgcccatgccagggggcaacggcacctttaca
cagcaggtccgtgcaaaggtgcgagaaatagaggagcaggtcaaggaccgagggcaggct
gtggagttccgctggtcctttgataaatgtcaggagacaactgctggcttcaccattggg
agggtcctacacaccttggaggttctagacaaccacagctttgagaagtcagacttcagc
aattccctggattccctttacaaccgcatctttggctcgggccagaacaaagacggtcac
gagatgtcccctgatgacgacgcagtggtgaccttactgtgtgagtgggcggtgtgctgc
aagaggtctggccgccacagggccatggtggtggccaagctactggagaagagacaggcg
gagatcgaagccgagaggtgcggtgagtcagaggtggtggatgagaaaggctcggtgtca
tcgggctctctctcggcggccaccctgcctgtgtttcaggacgtgctcctacagttcctg
gacactcaggcccccgtgctcactgagccgagcaacgagagcgagcgcgtggagttctcc
aaccaggtgctgctcttctgcgagctcattcgccacgatgtcttctcccacaacatctac
atgtgcacgctcatctcccgcggcgaccttgcctctgactcccacctgcctcgcccccgt
tcccctagcgatgagccctcggacgaatcagagcgcaaggaggctggcagcagtgtcaag
aatgaggacactggtctctcggagtcaatggagattgatcacaactcgagtactaatttt
gatgagatgttttctccccccatgcactgtgagtcaaagggcagcccctccccggagaag
actgcccaggatcctgcctttccattggtgtacgagcagccccgccacatccagtatgcc
acccacttccccatcccccaggaggagagtgccagtcacgagtgcaaccagcgcctggtg
gtgctctacggcgtgggaaagcagcgagacgaagcaagacacgccatcaagaaaatcacc
aaagacatcttgaaggtgctcaaccgcaaaagcacagcagagaccggaggagatgaagga
cagaagaggaagaggagtaagcccgaggccttccccacagcacaggacatcttctccaaa
tttcagcacctctcccactttgaccagcaccaggtcacctctcaggtgtccaggaatgtt
cttgaacagatcaccagctttgccttagggatgtcctatcacctgcccctggtccaacac
atccagttcatatttgacctcatggagtactcccttaacattagtggcctcattgacttt
gccattcagctgctgaacgagctgagcttggtggaggcagagctgctgctcaagtcgtcc
agcctggtgggcagctacaccacgggcttgtgtctgtgcatcgtggccgtgctgcggagg
taccactcctgcctcatcctcaaccccgagcagacggcgcaggtctttgacgggttgcgc
atcgtggtgaagtcaggggtgaaccctgcagactgctcttcagctgagcgctgcatcctg
gcctacctgtatgacctctatacctcctgcagtcacctcaagagcaagtttggagagatc
ttcagtgagttctgctccaaggtaaagaactccatctactgtaacatcgacccgtcagac
tctaatatgctgtgggaccctgtgttcatgatggaggccatcgccaacccgtcggcccac
aacttcaaccacagcatggtgggtaagatcctcaacgacagccccgccaatcgctacagt
tttgtctgcaatgtcctcatggatgtgtgcgtggaccaccgggaccccgagagagtgaat
gacattgggatcctgtgtgcggagctgactgcgtactgtcgctctctgagtgctgagtgg
ctgggcgtcctcaaggccctctgctgctcctccaacaatggcaactgtggcttcaatgac
ctgctgtgcaacgtggacgtcagcgatctctccttccatgactccctggccaccttcgta
gccatcctcattgcccgtcagtgtcttctcctggaggacctggtccgatgcgtagccatc
ccttccctactcaatgctgcctgcagtgagcaggactctgagcccggagcccgtctgacc
tgcaggattctgctgcaccttttcaagaccccgcagcacaacccctgcccccaggatgga
gccaaatcagataaatcttctgttgggatccggtcgtcgtgtgatcgccaccttctggct
tactcgcagaacagcatagtggtcggagctgtctttgctgtcctaaaggctgtctttatg
ctgggcgatgcagaactgaagggctcgggattttctcaccccgccggcctcgacgacgac
gacataggttccaagaagtcgggcggccacacagcctctatagagacggccagcctagac
atgtacgccaagtatgtgctgaagagcatctgccaacaggagtgggtgggcgagcgctgc
ctcaggtccctgtcggaggacagcagtgccctgcaggacccggtgctggtcaacatccag
gcccagcggctgctgcagctcatctgctaccctcaccgccagctggacagtgaggagggg
gacaatccccagaggcaacgcattaaacgcatcctccagaacatggaccagtggacgatg
agacagtcgtccctggaactgcagctcatgatcaagcagagtactaacaacgagctgtac
tccctattggagaacatcgccacggtcaccatagaggtgttccagaagtcggcggagatg
aactccaacaacccctcaggaaacagctcggccggcgccggaagctctacctccaacagc
aacaacactagcaaaatgaaaccagtgttgagtacgtcagagcggacaggtgtgtggctg
gtggcaccactgattgccaagctgcccacctcagtccagggccacgtcctgaaggcggca
ggggaggagctggagaagggccagcatctgggatcctcctcacgcaaggagagggaccgg
cagaaacagaaaagcatgtctctgctgagccagcagcctttcctatctctggtgctaacc
tgtctaaaaggccaggacgaacagcgagagggcctcctcacctccctctacagccaggtg
cagcagattgtaacaaactggcgggaggaccagtaccaggatgactgcaaggccaagcag
atgatgcacgaggcactgaagctgcggctcaatctggtaggtgggatgtttgacacggta
caacgcagcacacagcagaccaccgagtgggccgtgctactcctcgacatcatcagcagc
ggtacagtggacatgaagtccaacaatgagctcttcactacggtactggacatgctgagt
gtgctgattaatggcacactggctgctgacatgtccagcatctctcagggcagcatggaa
gagaacaagagggcttacatgaacctggtaaagaaacttcggaaagagctgggtgaccgg
cagtcagagagtctggagaaggtgcggcagctgctccctctgcccaagcagactcgtgat
gtcatcacgtgtgaacctcagggctcgctcatcgacaccaagggcaacaagattgccggc
tttgagaaggagggcctccaagtgtccaacaagcagaagatctcaccgtgggacgtgttc
gagggcctcaagcactctgcccctctctcttggggctggttcgggacggtgcgcgtggac
cgtaaggtgaccaagttcgaggagcagcagcgcttcctcctctaccacacccacctgaag
cccaagccgcgcagctactacctggaacccctccccctgccacctgaggaggaggagccg
cccacacccatgccccaggagctcgagaagaagatggtggaggcattgaagccggagaag
agcgtccctgtggtgtcgtccgacgtgaccaagaagaagcccaagaagaagaagacacca
tccaccagcaaaactgaggactttgtgacacgtacccagggtggagtgccgtatgggaca
ggtttgcccccagagatcctcatgggccagcaaactcacccctacaacaggttaggctac
agccagcaggccatgagcatgtatgcccagaaccagcctctacctccagggggccctggt
ttggacaccccgtaccgaccagcccggaaccctcagatgggcaagatgatgcccacgcgg
cccaactacccgggtgtgatgccaggtggcatgcctggcatgatgggcatggaaaagcag
taccctatgggctataagccccagcccaacataccgcagggccagatcctgcgccagcat
ctgcaggtcagactgaaccagagtattattggacaacagatgcgacagatgacgcccaac
caacaatacggctccgtgcagccaactcagaacatctcccagggctataccacgtacggc
tcccacatggggatgcagccgcatccctcccaggtgggtggtatagtccctccgtcgtac
gggaaccagggtttccagggaagccacccggggaccaaccagggtgtggtggactctctg
aggcagatggtacagaggcccagcggctacgttcatcagcaggcaccgggctactcgcac
accatgcaaaacacacagaggtttccccaccagtccatccatcaggctcccgtcatgcag
ggcctgagccacatgggtacgcagggggtccacccgggaatgagaccaaaccagatgctt
gctgagcagcagcaggcccagcagcaacagcagcagtacctcagacagcaggcactccga
gcccagcaacaggctcagcagcaagctcaacaacaacaacaggttcaacaacagcaagtt
caacagcaacatcaggtccagccccaacaagttcagcagcagcagcaacaacaacaacaa
cagcagcagcaagtagcgtcagcaccgccctccggtgcccaggctcagaaccaggccctg
ggcatgcagcccatgcccccacagcaacccatgttcccacgacaggggatgcagcagact
cagatgcaacagactcaacagcagcagcagactgcagcactggtcaggcaactccaacaa
caactctcaaatacacaacctggacagaacaccaactcatattactga
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integrated database retrieval system
