Oncorhynchus gorbuscha (pink salmon): 124010579
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Entry
124010579 CDS
T07892
Name
(RefSeq) clathrin heavy chain 1-like isoform X1
KO
K04646
clathrin heavy chain
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo04142
Lysosome
ogo04144
Endocytosis
ogo05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
124010579
04142 Lysosome
124010579
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
124010579
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ogo04131
]
124010579
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ogo04147
]
124010579
Membrane trafficking [BR:
ogo04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
124010579
Exosome [BR:
ogo04147
]
Exosomal proteins
Proteins found in most exosomes
124010579
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
TPR_PEP5_VPS11
TPR_COPA_B
TPR_Vps41
Motif
Other DBs
NCBI-GeneID:
124010579
NCBI-ProteinID:
XP_046179144
LinkDB
All DBs
Position
LG02:complement(79697022..79745364)
Genome browser
AA seq
1694 aa
AA seq
DB search
MAQILPIRFQEHLQLQNLGINPANIGFSTLTMESDKFICIREKVGEQAQVVIIDMADPNT
PIRRPISADSAIMNPASKVIALKDAAKTLQIFNIEMKSKMKAHTMTDDVTFWKWISLNTV
ALVTDNAVYHWSMEGDSQPIKVFDRHSSLAGCQIINYRTDAKQRWLLLIGISAQQNRVVG
AMQLYSVDRKVSQPIEGHAAGFAQFKMEGNTEESTLFCFAVRGQAGGKLHIIEVGTPATG
NQPFPKKAVDVFFPPEAQNDFPVAMQISSKQDVVFLITKYGYIHLYDLETGTCIYMNRIS
GETIFVTAPHEATAGIIGVNRKGQVLSVCVEEENIIPYITNVLQNPDLALRMAVRNNLAG
AEELFARKFNNLFAGGNYSEAAKVAANAPKGILRTPDTIRKFQSVPAQPGQTSPLLQYFG
ILLDQGQLNKFESLELCRPVLQQGRKQLLEKWLKEDKLECSEELGDLVKSVDPTLALSVY
LRANVPNKVIQCFAETGQFPKIVLYAKKVGYTPDWIFLLRNVMRISPEQGLQFSQMLVQD
EEPLADITQIVDVFMEYNLIQQCTSFLLDALKNNRPSEGPLQTCLLEMNLMHAPQVADAI
LGNQMFTNYDRAHIAQLCEKAGLLQRALEHYTDLYDIKRAVVHTHLLNPEWLVNFFGSLS
VEDSLECLRAMLSANIRQNLQICVQVASKYHEQLSTNSLTELFESFKSFEGLFYFLGSIV
NFSQDLEVHFKYIQAACKTGQIKEVERICRESNCYDPERVKNFLKEAKLTDQLPLIIVCD
RFDFVHDLVLYLYRNNLQKYIEIYVQKVNPSRLPVVIGGLLDVDCSEDVIKSLILVVRGQ
FSTDELVAEVEKRNRLKLLLPWLEARIHEGCEEPATHNALAKIYIDSNNNPERFLRENPY
YDSRVVGKYCEKRDPHLACVAYERGQCDQELINVCNENSLFKSLSRYLVRRRDPDLWASV
LLESNPFRRPLIDQVVQTALSETQDPEEVSVTVKAFMTADLPNELIELLEKIVLDNSVFS
EHRNLQNLLILTAIKADRTRVMEYINRLDNYDAPDIANIAISNELFEEAFAIFRKFDVNT
SAVQVLIEHIGNLDRAYEFAERCNEPAVWSQLAKAQLQKGLVKEAIDSYIKADDPSAYME
VVQAADQSGNWEDLVKFLQMARKKARESYVETELIFALAKTNRLAELEEFINGPNNAHIQ
QVGDRCYDEKMYDAAKLLYNNVSNFGRLASTLVHLGEYQAAVDGARKANSTRTWKEVCFA
CVDGKEFRLAQMCGLHIVVHADELEELINYYQDRAYFEELITMLEAALGLERAHMGMFTE
LAILYSKFKPQKMREHLELFWSRVNIPKVLRAAEEAHLWAELVFLYDKYEEFDNAIITMM
NHPTDAWKEGQFKDIITKVANVELYYKATQFYLEFKPLLLNDLLIVLSPRLDHSRAVNFF
SKVKQLPLVKPYLRSVQNHNNKSVNEALTNLFITEEDYQALRTSIDAYDNFDNISLAQRL
EKHELIEFRRIAAYLFKGNNRWKQSVELCKKDKLYKDAMQYASESKDTELAEELLGWFLT
EDKKECFAACLFTCYDLLRPDVVLETAWKHNIMDFSMPYFIQVMREYLFKVDAIKEKVDK
LETSESLRKEEEQATETQPIVYGPDNLVNGTPQLMLTAGPSVPVPPQQAYGYGYQAPAGY
PQAPQAQPGFGYGM
NT seq
5085 nt
NT seq
+upstream
nt +downstream
nt
atggctcagatcctgcctattcgctttcaggagcacctgcagctccagaacttgggcatt
aacccagccaacattgggttcagcaccctgacgatggagtctgataagttcatctgtatc
cgggagaaggtgggggagcaggcacaggtggtgatcatcgacatggccgaccccaacact
cccatccgcagaccaatctctgcagacagcgccatcatgaaccctgcctccaaagtcatt
gcacttaaagacgccgccaaaacccttcagatctttaacattgagatgaagagcaagatg
aaggcccacaccatgactgatgacgtcaccttctggaagtggatctccctgaacacagtg
gcacttgtgactgacaatgctgtctaccattggagcatggagggggactcccagccaatc
aaagtctttgaccggcactccagcctggcgggctgtcaaatcatcaactaccgcactgac
gccaagcagagatggctgctgctcattggcatctccgcacagcaaaaccgtgtggtgggt
gccatgcagctgtactctgtggacaggaaggtgtcacagcccatcgagggccatgccgca
ggcttcgcacagttcaagatggagggcaacacagaggagtccacactgttctgctttgct
gtgagaggacaggctgggggaaagttgcacatcattgaggtgggcaccccagccacaggg
aaccagccttttccaaagaaagcagtggatgtgttcttccctccagaggctcagaatgac
ttcccagtggccatgcagataagctccaagcaggatgtggtgttcctcatcaccaaatat
ggctacatccacctgtatgatctggagactggcacctgcatctacatgaacaggatcagc
ggggagaccatctttgttacggcccctcacgaagccactgccggcatcattggggtcaac
aggaaaggacaggttctgtcagtgtgtgtggaggaggagaacatcatcccttacatcacc
aatgtgctgcagaacccagaccttgccctgcgcatggccgtccgtaacaacctggccggg
gccgaggagctgttcgcgcgcaagttcaacaacctgtttgccggcggaaactactctgaa
gctgccaaggtggccgccaacgcaccaaagggcatcctgcgtactccagacaccatccgt
aagttccagagtgtgccagcccagccgggccagacctctcccctgctgcagtactttggc
atcctgctggaccagggccagctcaataagtttgagtctctggagctgtgcaggcccgtc
ctacagcagggacgcaagcagctgctggagaagtggctcaaagaggacaagctggagtgt
tctgaggagctgggggacctggtgaagtcagtggaccccaccctggctctctccgtctac
ctgagggccaatgtacccaacaaggtcatccagtgcttcgctgagaccggacagttcccc
aagatagtcctgtacgccaagaaggtgggctacactccagactggatcttcctgctgagg
aacgtgatgaggatcagtccagaacagggcctgcagttctcccagatgctggtccaggac
gaggagcctttggctgacatcacacagatcgtggatgtctttatggagtataacctgatc
cagcagtgtacctccttcctattggacgccctgaaaaacaacaggccttctgaggggccg
ctgcagacatgccttctggagatgaacctcatgcacgccccacaggttgctgatgccatc
ctgggcaaccagatgttcaccaactacgaccgtgcccacatagcccagctgtgtgagaag
gctggtctgctgcagagagctttagagcactacactgacttgtacgacatcaaacgggcc
gtggtgcacacacaccttctcaacccagagtggctggtgaacttctttggctccctctca
gtggaggactctctggagtgcctgagggccatgttgtctgccaacatccgtcagaacctg
cagatctgtgtccaggtggcttccaagtaccacgagcagctctccaccaactctctaacg
gagctcttcgagtccttcaagagttttgagggtctgttctacttcctgggttccattgtt
aacttcagccaggacctagaggtccacttcaagtacatccaggcagcctgcaagacggga
cagatcaaagaggtggagaggatctgcagagagagcaactgctacgaccccgaacgagtc
aagaacttcctcaaggaggccaagctgactgaccagctcccactcatcattgtgtgtgac
cgcttcgactttgtccatgacctggtcctctacctgtaccgtaacaacctgcagaaatac
attgagatctatgtgcagaaagtgaaccccagccgtctaccagtggtgattggagggctt
ctggacgtggactgttctgaggacgtcattaagagtctgatcctggtggtcagaggacag
ttctccactgatgaactggtggctgaggtggagaagaggaaccgactgaagcttctcctc
ccctggctggaggcccgtatccatgagggctgtgaggagcccgctacccacaatgccctg
gccaagatctacattgacagcaacaacaaccccgagcgcttcctgcgtgagaacccctac
tacgacagccgcgtggtgggcaagtactgcgagaagagggaccctcacctggcctgcgtt
gcctacgagagaggacagtgtgaccaggaactcatcaacgtgtgcaatgagaactcccta
ttcaagagtctgtctcgctacctggtccgtcgcagagacccggacctgtgggccagcgtg
ctgctggagagcaaccccttcagaagaccactcattgaccaggtggtgcagacagccctg
tctgagacccaggacccagaggaggtgtcagtcacagtaaaggccttcatgactgcagac
ttgcccaacgaactcattgagctgttggagaagatcgtactggataactctgtcttcagt
gaacacagaaacctgcagaacctgctgatcctgacggccatcaaggcagaccggacccgt
gtgatggagtacatcaaccgcctggacaactatgacgccccagacattgccaacattgcc
atcagcaacgagctcttcgaggaggcatttgctatcttcaggaagtttgacgtcaacacc
tctgctgtgcaggttctcattgagcacattgggaacctggatcgagcctatgagtttgcc
gagcgctgcaacgagccagctgtgtggagccagctggccaaggctcagctgcagaagggc
ctggtcaaggaggctatcgactcctacatcaaggctgacgacccttctgcctacatggag
gtggtacaggccgccgaccagagtggtaactgggaggacctggtgaagttccttcagatg
gcccgtaagaaggcccgggagtcctacgtggagacagagctcatcttcgccctggccaag
accaaccgcctggctgagctggaggagttcatcaatggacccaacaacgcccacatccaa
caggtcggcgaccgctgttacgacgagaaaatgtacgacgcggccaagttactgtacaac
aacgtgtccaactttggccgtctggcgtccaccctggtgcacctcggggagtaccaggcg
gctgtggacggggcccgcaaggccaacagcactaggacctggaaggaggtgtgctttgcc
tgcgtggatggaaaggagttccgcctggcacagatgtgtggcctccacatcgtggtgcat
gctgacgaactggaggagcttatcaactactaccaggaccgtgcttactttgaggagctg
atcaccatgctggaggcagccctggggctggaacgggctcacatgggcatgttcactgag
ctggccatcctctactccaaattcaaaccccagaagatgagggagcacctggagctcttc
tggtccagagtcaacattccaaaggttctgcgggcggcggaggaggcccacctgtgggcg
gagctggtgtttctgtacgataagtacgaggagtttgacaatgccatcatcaccatgatg
aaccaccccaccgacgcctggaaggagggccagttcaaagacatcatcaccaaggtggcc
aacgtggagctgtattacaaagcaactcagttctatttggagttcaagccgttgttactg
aatgacctgctcatagtgctgtcccccagactggaccactcccgtgctgtcaacttcttc
agcaaggtgaaacagctgcccctggtcaagccctacctgcgctctgtacagaaccacaac
aacaagtctgtcaatgaagcacttaccaacctcttcatcacagaggaggactatcaggct
ctgaggacctctatagatgcctatgacaactttgacaacatctcgcttgcccagcgcttg
gagaaacacgagctgattgagttcaggaggatcgctgcctacctcttcaagggaaacaac
cgctggaaacagagtgtggagctctgcaagaaggacaaactctacaaggatgccatgcag
tacgcgtcagagtccaaggatacagagttggctgaggagctactgggctggttcctgacc
gaggacaaaaaggagtgctttgccgcctgcctcttcacctgttatgacctgctgaggcca
gacgtggtgctggagacggcctggaagcacaacatcatggacttctccatgccctacttc
atccaggtcatgagagagtatctcttcaaggttgatgcaattaaggaaaaggtggacaag
ctggagacctctgagtccctaaggaaagaggaggagcaggcgacagagacacaacccatc
gtctatggtcctgataacttagtaaatggcacaccccagcttatgctgactgctggccca
agcgtgcccgtgcccccccagcaggcctatggctacggttaccaggctcctgcaggctac
ccccaggcacctcaggcccaaccaggctttggctacggcatgtaa
DBGET
integrated database retrieval system
