KEGG   Oncorhynchus gorbuscha (pink salmon): 124010680
Entry
124010680         CDS       T07892                                 
Symbol
vimr2
Name
(RefSeq) alpha-internexin
  KO
K07606  vimentin
Organism
ogo  Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:ogo00001]
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    124010680 (vimr2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ogo03019]
    124010680 (vimr2)
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:ogo04812]
    124010680 (vimr2)
   04147 Exosome [BR:ogo04147]
    124010680 (vimr2)
Messenger RNA biogenesis [BR:ogo03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Factors involved in mRNA localization
    Factors that have mRNA localization signals
     124010680 (vimr2)
Cytoskeleton proteins [BR:ogo04812]
 Eukaryotic cytoskeleton proteins
  Intermediate filaments
   Intermediate filaments
    Type III
     124010680 (vimr2)
Exosome [BR:ogo04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   124010680 (vimr2)
  Exosomal proteins of other cancer cells
   124010680 (vimr2)
SSDB
Motif
Pfam: Filament DivIC PI3K_P85_iSH2 TPR_MLP1_2 Phage_cement_2 Hydro_N_hd Cep57_MT_bd
Other DBs
NCBI-GeneID: 124010680
NCBI-ProteinID: XP_046179295
LinkDB
Position
LG23:46697942..46718261
AA seq 393 aa
MAMLRVSSYRRQFEEQWSRNGRSGGGCGGQYRSSAVKARGAAAEECACVQLDFVAAKMLN
KESLVRFAKDRSIIAALNDRFVALINMARCFEEDNESLEAQICELEERLTGQQTTSTTVA
VPEYSLDAVMERLRKERDQSLFDVEELRRELECLQEQYEETVQQRTLVQLEQEDVGLEVD
VVTTDCLALREQVNIYEEQLAHMEAQHETTVQNMVAPVEGPAAAGRGVLEFCNPDIKSAL
IDIKENYSQLAETIQCECRETGAVVAGAVVAIGAGKELTVARPAGVTGVGQITDVSELKK
LIAELEKELAELEKCGEELEDEIEMKREAYVEEIFELECRLEEMRGQQHELQVQMTEQCD
DYEELLGQKMAREIEIAAYRGLVEEEDERLCYL
NT seq 1182 nt   +upstreamnt  +downstreamnt
atggccatgctgagagtgtcgtcctaccgccggcagtttgaggagcagtggagtcggaat
ggacggtccggcggaggctgtggagggcagtaccgctcctcagcggtcaaggccaggggt
gcggctgctgaggagtgtgcgtgtgtccagctggactttgtggctgccaagatgctcaat
aaggagagtctggtccgattcgctaaagaccgcagcatcattgccgccctaaatgatcgc
tttgtcgccctcatcaacatggcacgctgctttgaggaggacaatgagtctctggaggcc
cagatctgtgagctggaggagaggttgaccggccaacagaccacctccacaaccgtagct
gtccctgaatacagcctggacgccgtgatggagagactgcgcaaggagagggaccagagc
ctgtttgatgtggaggagctgaggagagagctggagtgtctgcaggagcagtatgaggag
accgttcagcagaggaccctcgtccaactggaacaggaagacgttggcctggaagtggat
gtagtgaccacagactgtctggccctgagggagcaggtgaacatctatgaggaacaactg
gctcacatggaggcacagcatgagacgacggttcagaacatggtggcccctgtagagggt
ccagctgcagcagggagaggagtcctggagttctgcaaccctgacatcaagtcagccctc
atagatatcaaggagaactacagccagctggctgagaccatccagtgtgagtgcagggaa
actggtgcggttgttgctggtgctgttgtcgccattggagctggaaaggagctgacggtg
gccagacctgcgggggtcacaggcgttggccagataacggacgtcagcgaactgaagaaa
ctgattgcagagcttgaaaaggagcttgcagagctggagaagtgtggtgaggagctggaa
gatgagattgagatgaagagagaagcgtatgtggaggagatctttgagctggagtgtcgt
cttgaggagatgcgggggcagcagcatgagctgcaggtccagatgacggaacaatgtgat
gactacgaggagctgctgggtcagaagatggcccgggaaatcgagatcgctgcctacagg
ggtttggtggaagaggaggatgagaggctttgctacctgtga

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