Oncorhynchus gorbuscha (pink salmon): 124010682
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Entry
124010682 CDS
T07892
Name
(RefSeq) LIM and calponin homology domains-containing protein 1-like
KO
K24422
LIM and calponin homology domains-containing protein 1
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ogo04990
]
124010682
Domain-containing proteins not elsewhere classified [BR:
ogo04990
]
LIM domain-containing proteins
Other lim domain-containing proteins
124010682
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4757
CH
LIM
Motif
Other DBs
NCBI-GeneID:
124010682
NCBI-ProteinID:
XP_046179297
LinkDB
All DBs
Position
LG23:47690270..47858450
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AA seq
1438 aa
AA seq
DB search
MASPAADIGQPHQRHLLSESASEPAFLEAQKWIEAVTGRCSGDKDFRGGLENGILLCELL
SAIKPGLVKKINRLPTPIAGLDNLSVFLRGCEELGLKGSQLFDPGDLQDTSTRPKTRVAD
CSRKLTNVLITIYWLGRAANSCISYNGPTLDLKEFEGLLSQMRKEAEETESPQRSIRDSG
YIDSWDSERSDSLSPPRHGREDSFDSLDSLGSRSRQTPSPDVLVTRGIGSDGRGSDSESD
VGPHGGRKLPDVRKDDMLARRTSVSEPRVMVPFNQYLPNKSNASGYMPTPLRRKRGDREG
REEDGGRGGSGGGRKSWSTATSPIGSNRPFSPTELPNLEVPPVVAAIESPSPNFQAQPLP
KPQNQSEEEHRNEEEEKEEEMEGRKEEEGKLSPACTWRQEWEEREEEYERHPFNPPQHSQ
TPTLTHGETAIHLTGTAEQSTPARSCSKELYRLSSLTTSPMTTSIVVTSPPSAGDSPETT
RKFPHPPLMDREEAGPKKVGLAISLATDTGRNNDMWARHALTSPKQSSTTGPSQFLPVPT
ARLTTTLMVACQGRMGKSEVEGREGDKPAVARRPSWLDDDLQPIFSHRADSVSDDPESVS
MIDVRCEEDASLPHHSQVRHELMHNQYNMMKEEEDHWQDDLARWKSRRRSVSQDLIKKEE
ERKMMEKLMTGEGGAISQRRKSIKTYREIVQEKERRENELREAYQSARTSEEAALVLHRY
AQRFTISEAVLERLQLPKLLDRSVSEDPTTATSTRLPLTPSFRSPNSTSPEEDPNGPLKY
LRQQSLPAPKFTATVEAQVVGFPQGQSHRPQIQSRTPERSPSIQAASPKSIPLLTPKPYI
QSKGTQMLAGPKPGKVDGLLQVNGDMGNDEVTTPERDGRTSPVRFYPSTATPTASSDASD
TPPCVATPPPTHSPSPRASPLTAMTTLAQGGTSTAVPPSSVTGDAGPPSRPTSLPSELQS
TESIVEAGGRSAAGPLGEEPNTAAAAVQPSPATDSQRATKEQREVCTNATATRPNATVPC
PVQSEHATQQAQPMTAQVSEPSLELSQSAEEVAALADPGPVRNKPPREAPTTELANSASY
PPETGNPRLGLRWEFFAPPEGESRSVVKCRRTPLAGMEMVSSPVVIQAKRGDRWAWDPDE
ERKRQERWQQEQERMLQEKYQREQEKLKQEWERAQREVEEEERRYHEEERRILEETVAPL
TPLSCNLPSPIRGHAPTPMDPQDTIVRSLADWERKQELLERQGGSTESVEWKRQDNDRSS
DISTASRDESLKTAVSSISQNSSQTDKLTPSLRNGQRAPPAMALPQPPSKKQHPEVLLDC
AKPSQQTPSRDRRCGSIETMGPSPLKSPTCPSDMPPSPNRSVSGKKLCSSCGHPLGKGAA
MIIETLSLYFHIQCFKCGVCKGQLGDTTTGTDVRIRNGLLNCHQCYIRSRSAGQPTTL
NT seq
4317 nt
NT seq
+upstream
nt +downstream
nt
atggcaagtcccgctgcagatataggacaaccacaccagcgacatctcctctccgaatcg
gcctccgagcccgcgtttctagaagcgcagaaatggattgaggcggtcacaggcagatgc
tccggtgacaaggacttcaggggaggcctggagaacgggatcctgctgtgcgagttgctg
agcgccatcaaacctggcttggtgaagaaaatcaacagattacccactcccatcgctggc
ctggacaacctgagtgtgttcctgcgtggctgtgaggagctgggactgaagggctctcag
ctgtttgaccccggggacttgcaggacacatcgacacgccccaaaaccagggttgccgac
tgcagcaggaagctgacaaatgttctgattaccatatactggctgggccgggctgccaac
agctgcatttcctacaacgggcccacacttgacctgaaggagttcgaaggcctgctgtca
cagatgcgaaaggaggcggaggaaacggagagcccccaacgcagcatacgggacagcggc
tacattgacagctgggactcggagcgcagcgactcgctctccccgcctcgccacggccga
gaggactccttcgacagcctggactcgctcgggtcacgctccagacagacgccctcgccg
gacgtactggtcacccgcggcatcggcagtgatggccgcggcagtgactcagagtccgac
gtcggaccccacgggggcaggaagctgccggacgtgcgcaaggatgacatgctggcacgg
cggacctcggtgagcgagcccagagtgatggtgcccttcaaccagtacctgcccaacaag
agcaatgccagtggctacatgcccacaccgctgcgccggaagaggggcgaccgtgagggt
cgggaggaggacggtggccgaggcgggagcgggggcggccgcaagagctggagtaccgcc
acctcgcccataggaagcaatagacccttcagtccgactgaactccccaacctagaagta
cccccagttgtagccgctatagagtccccatcccccaacttccaagcccaaccccttccc
aaaccacagaatcagtcagaagaagaacacaggaacgaggaagaagagaaggaggaagaa
atggaggggaggaaagaggaggaagggaagctgtctccggcatgcacatggaggcaggag
tgggaggagagggaggaggaatatgaacgtcaccccttcaacccccctcaacactcacag
acccccacactcacccacggggagacggctatacacctgactgggactgctgagcaaagt
acccccgcccgctcatgctccaaggaactataccgcctgtcgtccctgacaaccagcccc
atgacgacctccatcgtcgtgacgagcccccccagcgccggggacagcccggaaacaacc
aggaagttccctcaccctccccttatggatagggaggaggcaggtccaaagaaggtaggg
ttggctatatccctggcgacagacaccgggaggaacaacgacatgtgggctcgccacgcc
cttacctcgcctaaacagagcagcactaccggtccaagccagttcctgcccgttcctaca
gccaggttaaccaccacactgatggtcgcctgccagggtcgcatgggcaagtcggaggtt
gaaggtcgcgaaggcgacaaaccggcggtggcgagacgtccatcttggcttgacgatgac
ctccagccaatattcagtcacagagctgatagtgtatcagatgacccagagagtgtgagt
atgattgatgtgcgctgtgaggaggacgccagcttgccacaccacagccaggtgcgccac
gagctcatgcacaaccagtacaacatgatgaaggaggaagaggaccactggcaggacgac
ctagcccggtggaagagtcgcaggagaagcgtctcccaggacctgatcaagaaggaggag
gagaggaagatgatggagaagctgatgacgggcgagggaggggccatttctcagaggagg
aagagtatcaagacctaccgggagatcgtgcaggagaaggaacgtcgtgagaacgagctc
cgcgaggcctaccagtcggcccgcacctctgaggaggcagcgttggtcctccaccgctac
gcccagcgcttcaccatcagtgaagccgtgctggagcgcctgcaactgcccaagctgctg
gacaggagcgtctctgaagatcccaccactgccaccagcacacgtctccccctcaccccc
agcttccgttctcccaactcaacctccccggaagaagatccaaatggtcctctgaagtac
ctgaggcagcagtcgctcccggcgcccaagtttaccgctaccgtcgaggcccaagtggtg
gggttcccccagggtcagtctcatcgcccccagattcagtcacgcacgcctgaacgaagc
ccctctatccaggctgcctcgcctaaatctattcctttgctgacgcccaagccttacatc
caatccaagggcacgcagatgctggcgggacccaagccaggcaaggtggacggcttgctg
caagtgaacggcgacatgggaaacgatgaggtcaccactccagagagagacggaagaacc
tcccctgtacggttctacccttccactgccacgcctacagcctcctctgacgcttccgac
acacccccatgtgtggccactcccccacccacacatagcccctcccccagggcgagccca
ttaacagccatgacaactttggcacagggtggcacaagcaccgcagtgccaccttcttca
gtgacaggagatgccggcccacctagccggcccacctcactgccctcggagctgcagagc
acagagagcattgtggaggcgggcggcaggtctgctgcaggcccacttggtgaggagcct
aacacggcagcggctgcagtacagccctctccagctacagactcacaacgcgctaccaag
gaacaaagagaagtgtgtacgaatgccacagcgaccagaccgaatgccacagtcccctgt
cctgttcagtcagagcacgcaacacagcaagctcagccaatgactgcacaggtcagtgag
cccagcctggaattgtctcagagtgcagaggaagttgctgccttggctgatccaggacct
gtcagaaacaaaccaccacgtgaggctcccacaacagagctggctaacagtgccagttat
ccgccagaaaccggcaaccctaggttaggcctacgttgggagttcttcgccccaccagag
ggggagagccgaagtgtggtaaagtgccgtaggactcctttggctggcatggaaatggtg
tcatccccggtagtgattcaggctaagcggggtgaccgctgggcttgggacccagatgag
gaacgaaagcgtcaggaaagatggcagcaagagcaggagcgcatgcttcaggagaagtac
cagcgtgagcaggagaagctgaaacaggagtgggagagagcgcaaagagaagtggaagag
gaggagagacggtaccatgaggaggagcgcaggatactagaagagactgtggcccccctg
acccccctctcctgcaacttgccctcacccatccggggtcacgcccccacaccaatggac
ccccaggacaccatcgtccggtcgctggccgactgggaacgcaagcaggagctgctggag
aggcagggggggagcacagagagtgtggaatggaaacgacaagacaacgacaggagtagt
gacatcagcacagcgtccagagatgagagcctgaaaacagcagttagctcgatcagccag
aacagcagtcagacagacaagctgactccgagtctgaggaatggccaaagagcacctccc
gccatggccctgccccagccccccagcaagaaacaacatccagaggtcttactagactgc
gccaaacccagccaacagacgccctctcgggacaggaggtgtgggtctattgagaccatg
gggcccagtccgttaaagtcacccacatgcccatccgacatgcctccatctccaaacagg
tcagtgagcggtaagaagctgtgctccagttgcggccaccctctgggcaaaggggcggcc
atgatcattgagaccctcagcctttacttccacatccagtgctttaagtgtggggtctgt
aaagggcagctgggtgacaccaccacggggacagacgtgaggattcggaacggcctcctc
aactgccaccagtgctacatccgctcccgctcagccggccagccaaccacattgtga
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