Oncorhynchus gorbuscha (pink salmon): 124010754
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Entry
124010754 CDS
T07892
Name
(RefSeq) zinc finger CCHC domain-containing protein 7-like
KO
K12597
protein AIR1/2
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
124010754
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ogo03019
]
124010754
03016 Transfer RNA biogenesis [BR:
ogo03016
]
124010754
Messenger RNA biogenesis [BR:
ogo03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
TRAMP complex
124010754
Transfer RNA biogenesis [BR:
ogo03016
]
Eukaryotic type
tRNA degradation factors
TRAMP complex
124010754
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCHC
Motif
Other DBs
NCBI-GeneID:
124010754
NCBI-ProteinID:
XP_046179354
LinkDB
All DBs
Position
LG23:complement(37453165..37459405)
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AA seq
497 aa
AA seq
DB search
MMMGHQNDEEVGGNEDNRFYIEASSSSEGELGFSQYKQSSSPRAPQATGGHSPLVLAFPL
SSGRALRDVLPLDSSPSPNSRLSLHSEQVLDLEYDDEVLEEWMILGGEEQEGDGDIQLNL
GYWSSSSESHSGTEDEELNAKYALKHNWAIIEKDKPRPYRYFSSDRSLTCHNCNKTGHLA
KGCTTPRRRPTCVLCGLQGHVQRACPGRHCHSCGLPSHGYQPCPEPPFWNQHCHRCGMAG
HLSDACPDTWRQFHVTTQQEVPLRPHVDHTHKHCRHTAHCYNCSRRGHLGHECTQRRMIS
GTFASLPYVCHYDNKQDIVKLNTRIHRKARELRVEGFMPLLEHQRTYVTPGGSSEEEPPS
PAPGRRRSLEGRRKTWPERRRERREVKKLRREAQARRAVGTTKWGSDEIVYTRDHLKNPH
REPIPPPLKKRRREERRESKSEERNRKGRSKESSRKNREAERWKKRGGLKRGYLYPRDDL
GPMNDYLLSPQNRVRIL
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
atgatgatgggccaccagaatgatgaggaagtgggtggtaatgaagacaacagattctac
atcgaggcctccagtagctcagaaggtgagctggggtttagtcagtacaaacagtccagc
tcaccgagagctccccaggccactggaggacactctccactagttctggccttccctctc
tcgtctggccgggctctacgggacgtgttgccactggacagcagcccaagcccgaactcc
aggctaagcctccactcagagcaggtcctggacctggagtatgatgatgaagtcctagag
gagtggatgatcctgggaggagaggagcaggagggagatggggacattcagctcaacctg
gggtactggagcagcagctcagagtcacattctggaacagaggatgaagaactgaatgca
aaatatgctctcaaacacaactgggccataatagagaaggacaagccacgcccataccgc
tatttcagctctgaccggagtctcacctgtcacaactgcaacaagactggacacctggcc
aagggctgtaccaccccgaggaggcgacccacctgtgtgttgtgtgggctccagggccat
gtccagagggcctgtccaggccggcactgccacagctgtgggctcccctcacatgggtac
cagccctgccctgaaccccctttctggaaccagcactgccaccgctgtgggatggctggc
cacctatcagatgcttgtccggatacatggagacaattccacgtcacaactcagcaggag
gttcccctcaggccacacgttgaccacacccacaaacactgcagacacaccgctcactgc
tacaactgctccaggagaggacacctcggccatgagtgtactcagaggaggatgatcagt
gggacgtttgcctcgctcccctacgtctgtcactacgacaacaagcaggacatcgtcaaa
ctgaacaccaggatacacagaaaagccagagagctaagggtggagggcttcatgcctctg
ttagagcaccagaggacctacgtgacaccagggggcagtagtgaagaggagccaccctcc
ccagctccagggaggaggagaagcctggagggcaggaggaagacgtggccggagagacgc
agggagagacgggaggtgaagaagctgaggagagaggcccaagccaggagggcggttggg
acgaccaaatggggctcagacgagattgtttacaccagggaccaccttaagaacccccac
agagaacccatacctccccctctgaagaagagacgccgtgaggaaaggagggagagcaag
agtgaggagaggaataggaagggcagaagtaaagagagcagtaggaagaatagagaagca
gagaggtggaagaagagaggagggctgaagcgtgggtacctgtacccccgtgatgacttg
ggacccatgaatgattacctcctctccccccaaaatagggtgcgaattttataa
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