Oncorhynchus gorbuscha (pink salmon): 124010936
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Entry
124010936 CDS
T07892
Symbol
uvssa
Name
(RefSeq) UV-stimulated scaffold protein A
KO
K23720
UV-stimulated scaffold protein A
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
124010936 (uvssa)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ogo03400
]
124010936 (uvssa)
DNA repair and recombination proteins [BR:
ogo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Other TCR factor
124010936 (uvssa)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UVSSA_N
DUF2043
INTS1_R4
LBD_receptor
DUF1195
Motif
Other DBs
NCBI-GeneID:
124010936
NCBI-ProteinID:
XP_046179721
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All DBs
Position
LG23:complement(21968813..21994232)
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AA seq
733 aa
AA seq
DB search
MDHAQRDKLSELVEELTTSGEPQLNPNKLKEVKKICKVSNDYIEHFYHLTMTQLAQEHAE
IRLSAFQMVSELFTRSHHFRVLLVDNFQEFLDLTVETDSDEPLPPPKEVARKLKTIAIKT
VQEWQATYGEAYKKLALGYHFLKQVKKVDFHDVQARTLAERKREEERQKRLERIYKDKVE
KATKEMEDASEEIEECLTEINNCIKLLLPAEFDLSDLDTSTPANNSTVSVSSVPNEKAST
SSDLEEQPCCSKDLELQREPKNPETSTATKTNEEKEEEDPSDEDSNIEDVLVEDAFIRNT
GLISHKYSLDLNLSTDLKLKETEENEAVVNTMKDLHKLLSTKHLPVVQYWVQVFTKAGVP
EPLLRRAIDLKSSLERALQKHEDLHIDYKARHRRVMKAPEGSDDDDDDFEEVPEKEGFEP
HIPDHLREEYGLEPSPSTSVACKKPVQPPVKCPAKGASHTLSRPRKRATDEEQDPTCAAA
TLRLFKQRLLPQPPSTSSAAEGHVDPTYQTSEDRDKAPVIPFGLDLYYWGEEQPTAGKII
KNSSQHQFWVPNEVEEEVENKELAAQMKSRYITFAGRFQPVKHRCKTPMPNGGLCERQDR
VKCPFHGPIIPRDELGKPTNPEDAVRLEKEEWKRREDQPDWRDPELMRDIELATGEDLGS
SKTFGKGKKGKGKGKKKKYPNLSDLKKGVNTSRSRLEKKVFNPSSMRRVTDVMNKMDKLK
HAKFANQFNYALN
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atggaccacgcacaacgagataagttgtcagagctcgtggaagagttgaccacatctggg
gaaccacaactaaatccaaataaactgaaggaagtgaaaaagatatgcaaagtttccaac
gactacattgaacacttctaccacctgaccatgacgcagctggcccaggagcatgccgag
atccgcctgtcagccttccagatggtcagtgaactcttcacccgctcacaccacttcagg
gtcctgctggtggataacttccaggagtttctggacctgacagtggagacggactcagat
gagcctcttccaccacccaaagaggtggcccgaaagctgaagaccattgccatcaaaact
gtgcaagaatggcaggccacttatggagaagcctataagaaactggccttgggctaccac
tttctcaagcaggttaaaaaggtggactttcatgatgttcaggccagaacactagctgag
aggaaacgagaggaggagagacagaaaagactggagaggatttataaagacaaagttgaa
aaggccaccaaggaaatggaagatgcctcagaagagattgaagagtgtcttacagagata
aacaactgcataaagttgcttctgcctgcagagtttgacctcagtgacctagatacctca
actccagccaataattcaaccgtttctgtctcttctgtgcctaatgagaaggctagtacc
tccagtgacctagaagaacagccctgttgtagtaaagacctggagctccagagggaaccc
aagaatccagagacaagtacagcaacgaaaaccaatgaggagaaggaggaagaggatcct
agtgatgaagacagcaatatagaggatgttctggtagaagatgcattcatacgcaacaca
ggactcatatctcacaaatacagcctggacctgaacctctccacagatttaaagctaaag
gagacagaggaaaatgaagcagtggtgaacaccatgaaggacctgcacaaactgctcagc
acgaaacacctgcctgtcgtccagtactgggttcaggttttcaccaaagcgggtgtgcca
gaaccgctcctccgacgtgccatagacttgaagtcgtcgctggagagagctctgcagaaa
catgaagacttgcacattgactacaaggccaggcatcgcagagtgatgaaagcgccggag
ggcagcgatgacgacgatgatgacttcgaggaggttccggagaaggagggttttgaaccc
cacattccagaccatctacgggaggagtacggtttagagccgtccccctctacctctgtg
gcctgtaagaagccggtgcagcctccagtgaagtgtcctgcaaaaggagcctctcacacc
ctctccagacccaggaagagagccactgacgaggagcaggaccccacctgtgcagccgcc
acactccgcctcttcaagcagcgcctcctaccccagccacctagcaccagctctgcagca
gaaggtcatgtggaccccacataccagactagtgaggacagggacaaagctccagtcatc
cccttcggtttggacctctactactggggagaggagcaacccactgcaggcaaaatcatc
aagaatagctcccagcaccagttctgggttcccaacgaggtagaggaagaggtggagaat
aaggagctggctgcccagatgaagtccaggtacatcacgttcgctggccgcttccagccc
gtcaagcacaggtgcaaaacccccatgcccaacggaggcctctgtgaacgccaggaccga
gtcaagtgtcctttccatgggccgatcatcccacgagacgagctgggaaaacccaccaac
cctgaggacgctgtgcggctggagaaagaggaatggaaacgtagagaggaccagcctgac
tggcgggaccctgagctgatgagggacatagagcttgccactggggaggacctggggtcc
tccaaaacctttgggaagggcaagaaaggcaaggggaagggcaagaagaagaagtacccc
aacctcagtgatctgaagaagggtgttaacacttcacgctccagactagagaagaaggtt
ttcaacccgagctccatgaggcgagtgacagacgtcatgaataaaatggacaaattgaaa
cacgcaaagtttgcaaaccaatttaattatgcactgaattaa
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