KEGG   Oncorhynchus gorbuscha (pink salmon): 124010974
Entry
124010974         CDS       T07892                                 
Name
(RefSeq) lysine-specific demethylase 3B-like isoform X1
  KO
K15601  [histone H3]-dimethyl-L-lysine9 demethylase [EC:1.14.11.65]
Organism
ogo  Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:ogo00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:ogo03036]
    124010974
Enzymes [BR:ogo01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.65  [histone H3]-dimethyl-L-lysine9 demethylase
     124010974
Chromosome and associated proteins [BR:ogo03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    124010974
SSDB
Motif
Pfam: PWWP_KDM3B Tudor_KDM3B JmjC DUF7030 Cupin_2 C1_2
Other DBs
NCBI-GeneID: 124010974
NCBI-ProteinID: XP_046179785
LinkDB
Position
LG23:27743967..27763940
AA seq 1841 aa
MGDSLELIGKRLLLLLSDGRSAAGPEAEQSTWTRDWLRGTVRAVSVIGLASPGVEVSGGE
ATTTTAAAGLTVFVEFEDCAWRRRSWVQVYGEEVRAVLVESAIVWANCSQPKQNHPAAGV
TSGTAWPALAFRCLVDRVGLGSLVPVEFFGSRTLDFLPDGNSLQRFETAKDVRHSLLLEQ
PSLQAAVSSWHSDFELQEILRKGSYTVQGRKVQVYQCEFEEHWALGLVSRHDPKSHIMEI
TMDQGEETQVVDPRVIHVMLAEDHFDEKGKNARRRKESDGGKGESGRRRRTASEGEEDMT
LKRFKGSGEGAADGQNGSGSTKASEEGMVTWGAELAGGGRRVNSSSSEVTQVYASPNSTS
TQMDQSNTLPRYTKENGRALSTQDRQGSADSTTTVTPTPPPLKQAPSPFSNTSFPSLGQM
PSLVPGALAPKPSPAGPTLEREEPSQSTNPKMAALVSPGPVTISSPYQASAPSVALSASL
GFSPKPPVWKGTINQSEGSKTPILAAAGFRLPQSKPAGASVFGEVSSKTSASSNTPSASQ
DSSRPFGFAFGGTKNNKAQTKQQDQNLFFQCMTGQKTGQNPGGPNQNQTPGQSHSKDTNY
FTAVSESLSKKPPSLFKPSVLAPASAGLFSSATASLKEQSKVPETQSAGNGVLNNNFAGD
KLSPSFSSGSGGMRCSGLVMGAMDTPALGGANNRSGTNGVVVGGFGTKTDSHQNLFLQGS
KEPSNPFLAYGEKLSHSPFSGKPAPLEPETLGPSSASESKSNLFTMVELPKGILSSPFVS
LAAAAASSSSSPAPGFTQRPQSVTSSKPMESSSTGDQGSSAEGGSLDDRPSSTSGFPMFG
SAVAGGSGENVPMPFDQGQAQKFALEERGQASKRDSDSSDNSDLSDLSETEEGLERGHAP
GGLVGPVKEGAMLLQKGKGPGVAKSRPRNKPFKVGQSVLKDVTKVRRLKQSGESFLQDGS
CINVAPHLHKCRECRMERYRKYREQEPDDDDPNVACRFFHFRRLAFTRKGILRVEGFLSP
QQSDAMAMGLWLPSPSVQEGLDLDTSKYILANVGDQFCQLVMSEKEAMMMVEPHQKVAWK
RAVRGVREMCDVCETTVFNIHWVCRKCGFGVCLDCYRQRRNRPMEEVDEGPDDEVFSWLK
CVKGQRHEPQNLMPTQIIPGTALYNIGDMVHSARGKWGIKANCPCTSRHHRPLVRPSAPN
GISQQSAVSSSTGSSGSGPITGGGGPAGSTTPMPEGAEMTVVKTEPTSTTTSEGGVDTNG
ANHTSATPNPAQTPTPKDPRPSTGEGNSTALHWLADLATQKAKVEDTKDSGSMRSVMGRD
TRSPFGLDSFSALSKPSSSSSSPKLFNSLLLGSSNSQPKPEGSSLRDLLNSGPGRLPQGP
GDSGVTFPSVFSTSVAGDKLKGSLPNFLDHIIASVVETKKAEGRRLGEGGSELGGVGRRD
GVMGLSVLDPHTSHSWLCDGRLLCLQDPSNTNNWKIFRECWKQGQPVLVSGIHKRLKGAL
WRPEAFSEEFGDQDVDLVNCRNCAIISDVKVRDFWDGFQIISKRLKGSDGQPMVLKLKDW
PPGEDFRDMMPTRFDDLMDNLPLPEYTKRDGRLNLASRLPNFFVRPDLGPKMYNAYGLME
TEDRSVGTTNLHLDVSDAVNVMVYVGIPEGEGDHVKEMDIAGCKEVMTTIEEGDVDEMTK
RRVYEAKEKPGALWHIYSAKDAEKIRELLRKVGEEQGQENPPDHDPIHDQSWYLDGVLRR
RLYEEYGVQGWAIVQFLGDAVFIPAGAPHQVHNLYSCIKVAEDFVSPEHVKHCFRLTQEF
RHLSTTHSNHEDKLQVKNIIYHAVKDAVGTLRAHEPKLARS
NT seq 5526 nt   +upstreamnt  +downstreamnt
atgggggactctcttgaactgattgggaagcgacttctactgctcctcagcgatggaagg
tccgcagccggacccgaagcggagcagtccacttggactcgcgactggctccgggggacc
gtccgggctgtcagcgtcataggtttggccagcccaggggtagaggtgagcggaggagag
gcgacaacaacaacagcagctgcggggctgacggtgtttgtggagtttgaggactgtgcg
tggcgcaggcgctcctgggtacaggtgtatggggaggaggtgagagctgtactggtagag
agtgccattgtctgggctaactgcagtcagcccaaacagaaccaccctgcagctggagta
acctctgggacagcctggccagctctggcattccggtgtctagtggaccgtgtgggtctt
ggttccctggtcccagtggagttctttgggagcagaaccctggacttcctccctgacggg
aattcactccagagatttgagacagcgaaagacgtgaggcactctctcctactggagcag
ccttctctgcaggctgcagtttccagctggcacagtgactttgagctgcaggagatcctc
aggaagggctcctacaccgtccagggccggaaggttcaggtgtaccagtgtgagtttgag
gagcactgggccctgggcttggtctctcggcacgaccccaaatcacacatcatggagatc
accatggaccagggagaggagactcaggtggtggatccccgggtaatacatgtgatgctg
gctgaagatcactttgatgagaaagggaagaatgctcgacggaggaaggagagcgacgga
gggaagggcgagagcggccgtagacggaggacagcctctgagggcgaggaggacatgacc
ctgaagcgctttaagggttcgggagagggagccgcagacggacaaaacgggagcggctcc
accaaggcctctgaagaggggatggtgacatggggagcagagttagcaggaggaggacgc
agagtgaacagcagttcctctgaagtcacacaggtttatgcctccccgaacagcacttcc
acccagatggaccaatcaaacactctgcctcgctacaccaaggagaacggacgtgccctc
tccacacaagacagacaggggtctgctgactccaccaccacagtcacccccactccaccc
cccctcaaacaagccccctcccccttctccaacacttccttcccctctctgggccagatg
cccagcctggtccctggagctttggccccaaagccctccccagcaggacccaccctagag
agagaagagccatcccagtctaccaaccccaagatggctgccctagtctccccaggcccg
gtgaccatctcatccccatatcaagccagtgcccccagcgtggctctctctgcctccctt
ggcttcagccccaaaccccctgtctggaaaggaacaatcaaccagtcggagggctctaag
actcccatcctggctgcggctgggttccggcttccccagtccaagcctgctggggcttcc
gtgttcggagaggtgagctccaagaccagcgcttcctccaacacaccatcagcctcccag
gactcctcaagacccttcggatttgcctttggaggcaccaagaacaacaaggcccaaacg
aagcagcaagaccagaacttattcttccagtgtatgacgggtcagaagactggccagaac
cctggtggtcctaaccagaaccagactccaggtcagagccattctaaggacaccaactac
ttcacagcagtgtccgagagcttgagtaagaagcctcctagcctgttcaagccctctgtt
ctggccccggcatcagctggcctgtttagctcagctacagcttctctcaaagagcagtcc
aaagtgcctgagacccaatcggcaggcaacggagtgctcaacaataattttgcaggggac
aaactctcaccttccttcagcagtggctctggggggatgaggtgttctggtctggtcatg
ggggcgatggacaccccagctctgggtggtgctaataacaggagtggcactaacggtgtc
gtggtgggcggcttcggcaccaagacagacagccaccagaacctgttcctccagggctcc
aaggagccctccaaccccttcctggcctatggggagaagctctcccacagtcccttcagt
ggcaaaccagcccctctggagcctgagaccctgggcccgtcttcagcttcggagagcaaa
tccaacctgttcaccatggtcgagctgcccaagggcattctgtcttcccccttcgtctcc
ctcgcagctgccgctgcctccagttcttcctccccagcccctggcttcacccagaggccc
cagtcagtcacctcctccaagcccatggagagttcctccacaggagatcagggctcctca
gctgagggtggttctctggatgaccgacccagctccacctcaggcttccccatgtttggg
agtgcagtcgctggagggagtggtgagaatgtacccatgccttttgaccagggccaggcc
caaaagtttgccctggaggagcgaggtcaggcatctaaacgtgactctgactccagcgac
aacagtgacctgtcggacctaagtgagacagaggagggtctggagaggggccatgcacct
gggggcctcgtggggcccgtcaaggagggggccatgctgctgcagaagggtaaagggccc
ggggtggccaagagccgcccacgcaacaagcccttcaaagtgggccagtcagtgctgaag
gacgtgactaaggtgcgtcgtctgaagcagtcaggagagtcattcctgcaggacggatcc
tgtatcaacgtggcgccccacctccacaagtgtcgcgagtgtcgcatggagcgctacagg
aagtaccgggagcaggagcctgacgacgacgaccccaacgtggcctgccgcttcttccac
ttccgcaggctggcattcacacgtaagggcattctgcgtgtggagggcttcctgagcccc
cagcagagcgatgccatggccatgggactgtggcttccctcgccgtccgtacaggagggc
ctggacctggacacctccaagtacatcctggccaacgtgggagaccagttctgtcagctc
gtcatgtctgagaaggaggccatgatgatggttgagccacaccagaaagtggcgtggaag
cgtgcggtgcgcggtgtcagggagatgtgcgacgtatgtgagaccaccgtcttcaacatc
cactgggtctgcaggaagtgtggctttggggtgtgcctggactgctaccggcaacgcagg
aaccgccctatggaggaggtggatgagggacctgatgacgaggtgttctcctggttgaag
tgtgtaaagggccagagacacgagcctcagaacctcatgcccacacagatcatacctgga
actgctctctataacataggggatatggtgcactcagccaggggcaaatggggcatcaag
gcaaactgcccctgcaccagccggcaccacaggcccctagtgcgccctagcgcccccaat
ggcatctcacagcagtctgctgtctcttccagcacggggagcagtggtagtggaccaatc
acaggtggcgggggtccagcgggttcaaccactcctatgccagagggggcggagatgaca
gtggtcaaaacagagcctacttccaccacaacgtcagaagggggagttgatactaatggg
gccaaccataccagcgccaccccaaatcctgcccagacccccacccccaaagaccctcgc
ccctccactggtgagggaaactccaccgccttgcactggttggcagaccttgccactcag
aaagccaaggtggaggacacaaaagattctgggtcgatgcgctctgtgatgggccgggac
acacgctctccctttggcctggactcgttcagcgccctgtccaagccttcgtcttcctcc
tccagtcctaaactgttcaacagcctgctgctgggctccagcaacagccagcccaaacca
gagggctccagcctccgagacctgctcaactctggacccgggaggctccctcagggcccc
ggagattctggagtaaccttcccatctgtcttctccacctcagtggctggggacaagttg
aagggcagcctgcctaacttcctggaccatatcatcgcctcggtggtggagaccaagaag
gcggagggccgtcgtttgggggagggcggcagtgagctaggcggggttggccgtagggac
ggagttatgggcctcagcgtgctagacccccacacctcccactcctggctctgtgacgga
cgcctgctctgcctgcaggacccctccaacaccaacaactggaagatcttcagagagtgt
tggaaacagggccagccggtgctggtgtctggtatccataagcgtctgaagggggctctg
tggcggcctgaggccttcagcgaggagtttggggaccaggatgttgacctggtcaactgt
cggaactgtgccatcatctctgacgtcaaggttcgagacttctgggacggcttccagatc
atctccaagcgtctgaagggtagtgatggtcagcccatggttttgaagctgaaggactgg
cctcctggagaagacttcagagacatgatgcccacacggtttgatgacctaatggacaac
ctccccctcccagagtacactaagagagacggccgtctgaacctggcctcccgcctgccc
aacttctttgtcaggccagacctggggcctaagatgtataatgcttatggtctgatggag
acagaagaccggagtgttggcaccaccaacctgcacctggacgtgtctgatgccgtcaac
gttatggtgtacgtgggcatccctgagggagagggagaccacgtcaaggagatggatatc
gctggatgtaaagaggtgatgaccaccatcgaggagggtgatgtggatgagatgaccaag
aggagggtgtatgaggccaaggagaagcccggggcactctggcacatctactctgccaag
gacgccgagaagatccgagagcttctccgcaaggtgggtgaggagcagggccaggagaat
ccgccggaccatgaccctatccacgaccagagctggtacctggacggggtgctgcgcagg
aggctgtatgaggagtatggtgtgcagggctgggccatcgtacagttcctgggagacgca
gtcttcattcctgccggggctccccaccaggtccataacctgtacagctgtatcaaggtg
gcggaggactttgtgtctcctgagcatgtgaagcactgtttcagactgacccaggagttt
agacacctgtccaccacacactccaaccacgaggacaagctgcaggtgaagaacatcatc
taccatgctgtaaaggacgctgtggggacactgagggcccacgaacccaagctagcacgc
tcttag

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