Oncorhynchus gorbuscha (pink salmon): 124011002
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Entry
124011002 CDS
T07892
Name
(RefSeq) SLIT and NTRK-like protein 6
KO
K25837
SLIT and NTRK-like protein 6
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
124011002
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
LRR_14
LRR_LRWD1
LRR_9
LapA_dom
FtsL
TMEM154
Motif
Other DBs
NCBI-GeneID:
124011002
NCBI-ProteinID:
XP_046179846
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Position
LG23:complement(58499735..58510126)
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AA seq
874 aa
AA seq
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MPRILTSPHGSTSLSQASFGLATVFLTLHKGYNGQKMLPCILFLCSFVTAACFQAIQPSK
AFLAESCDSLCSCEEKDGILYLNCEERNISKISQIKVPSALPFHLNLYKNDLVELQAEDL
EDLKNAVSLHLGANSIQELEPGVFSALGSLKKLHINSNFLVMLKEDTFHGLVNLEFLQAD
TNFIRVVEPGAFSKLIRLKVLILNDNAIEFLPSNIFRFVPLTHLDLRGNQLQTLPYVGFL
EHIGRIMELLLEDNDWMCDCEILHLKIWMENMRAQSAIGEVVCSSPHHLRGTILAKIKRD
VLCPSHADINLEEPSKSLDMVVTPSSKVAENPKLEAAKDNAKVPTPAYVPASPCVEHCSC
HNHPVAGFLMHCQDRGIQRISDIGILEQTPTKLVLTGNMIQRLLKYDFVTYDGLELLNLA
NNRIDYIDNETFLSLSNLKKLYLNGNRIETLSATMFIGLHNLEYLYLEYNIIKEIVPGAF
NPLSNLKLLSLNNNLLTSLPLHIFRNVPLTKLNLRKNLLMHLPVSNVLDQLDSLEQIYLE
DNPWDCSCDLVSLKQWVEKLRKDTVIGSILCHTPRKVAKAELRALRNELLCPGLVTYSLP
TGEDESVTTTVATDGARSGFFSSITDSVPLSVLILSLLVIFLMVIFCSAGIVVFLVHRRR
RRVKKKQAEEQPRESSSPIHLQYSMYGQKTTHHTLAQRTGSTVYDERSHSPIVQICRNPT
YCTQHKEYETDLNVLDEPKHICRSIMETENTSPLTGSNLKFRAVTSDCPTEFVTLGDASS
LYKNILERERVRELQQLGITEYLRKNMSQLQPTVEVSVPGSGHHEELKLMETIMLSRPRK
VMVEQTKNEYFELKANLHTEPDYLEVLEHQTAFN
NT seq
2625 nt
NT seq
+upstream
nt +downstream
nt
atgcctcgcatccttacgtctccacatggatcaacctctctatcccaagcatcctttgga
ttagccacagtctttctcactctgcacaaaggatacaacggacagaaaatgctaccctgc
atccttttcctttgctcatttgtcactgctgcgtgtttccaagccatccagccctccaag
gcatttctggctgaatcctgtgactcattgtgttcttgtgaagaaaaggatggcatcctg
tatcttaactgtgaggagagaaatatcagcaagatctcccaaatcaaagtgccatcagct
ctacctttccacctcaatctgtacaaaaatgacttggtggagttgcaggcagaagacttg
gaagatttaaagaatgccgtttcacttcatctcggggctaatagcatacaagagcttgaa
cctggcgtctttagtgcactgggctccttgaagaagctccacatcaacagtaatttcctg
gtcatgttgaaggaagacacttttcacggcttggtaaatttggagtttctccaggcggac
acaaacttcatccgcgtggttgagccgggggcattcagcaaactcatccgcctcaaagtt
ctgatcctcaacgacaacgccatcgagtttcttcccagcaatattttccggtttgttcca
ctcacccacttggacctgcgggggaaccagttacagaccctgccttacgttggcttcctg
gagcacattgggcggatcatggagcttcttctggaggacaacgactggatgtgcgattgt
gagatccttcacctgaagatctggatggagaacatgcgggcccagtcggccattggggag
gtggtctgcagcagcccccatcacctcaggggcaccatcctggccaaaatcaaacgggat
gttctctgcccgtctcacgccgatatcaacttagaggagccttccaagtcactggacatg
gtggtgactccgtcttccaaagtggcagagaatccgaagttggaggccgccaaggacaac
gcaaaggttccgacacctgcttatgttccagcgagtccttgtgtggagcactgttcttgt
cacaatcacccggtggctgggtttttaatgcattgtcaggacagaggaattcaacggatt
tcagatattggaatacttgagcaaacccccaccaagctggtgcttacaggaaatatgatt
cagagactgttgaaatatgactttgtcacatatgacggtttggagttattgaatttagcc
aacaatcgaatcgattacattgacaatgaaacttttctcagcttaagcaatttgaaaaaa
ctttatctcaacggcaacagaattgaaaccctttccgcgaccatgttcattggactccac
aaccttgaatacctatatttggaatataacattatcaaagaaattgttccaggagcgttt
aatcctttgtctaatctcaaactcttgtctttgaataacaatctgctgactagtctccca
ttgcatatatttcgcaatgtgcccctcaccaaactgaacctgagaaaaaatctgctcatg
cacctgcctgttagcaacgtgctggaccagcttgactctttagagcagatttatttagag
gacaacccctgggactgcagctgtgacttagtcagtctcaaacagtgggttgagaagctg
aggaaggacacagtcataggttccattttgtgtcacacaccgagaaaagtggcgaaggct
gagctgagagccctcagaaatgagttgctgtgccccggcctagtgacctactccttgccc
acgggcgaggacgagagcgtgacaaccacagtggcgactgacggcgctaggagcggtttc
ttcagctccatcacagactcagttccactctccgttctgatccttagcttgctcgtcatc
ttcctcatggtcatcttctgttccgcggggatcgtggttttcctcgtgcacagacggcga
aggagggtgaagaagaaacaggcggaggagcagccgcgggagagcagcagccccatccac
ctgcaatacagcatgtacggccagaaaaccacccaccacacactggcgcagaggaccgga
agcaccgtatacgacgagcgctcacacagccccatcgtccagatctgccgcaaccccacc
tactgcactcagcataaagaatatgagaccgacctcaatgtactagacgaaccaaagcac
atctgtcgtagcatcatggagacagagaatacctcccctctcacaggctctaatttgaag
ttcagagctgtgacgtcagactgcccaactgagttcgtaacactcggcgatgcgagctcc
ctctataaaaacatactagagagggagagggttagggagctgcagcagctcggaattact
gaatacctcaggaaaaacatgtcccagctgcaaccaacggtagaagtgtcggtcccagga
tcaggacaccacgaggaactgaaattaatggagactattatgttgtcgagaccgcggaag
gtcatggtggaacaaactaaaaatgagtactttgaactcaaagctaacctacacaccgag
ccagattatttggaggttctggagcatcaaactgcatttaactga
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