Oncorhynchus gorbuscha (pink salmon): 124011043
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Entry
124011043 CDS
T07892
Name
(RefSeq) runt-related transcription factor 1-like isoform X1
KO
K08367
runt-related transcription factor 1
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
124011043
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ogo03000
]
124011043
Transcription factors [BR:
ogo03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
Runt
124011043
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Gene cluster
GFIT
Motif
Pfam:
Runt
RunxI
Motif
Other DBs
NCBI-GeneID:
124011043
NCBI-ProteinID:
XP_046179946
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All DBs
Position
LG23:65442086..65515039
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AA seq
493 aa
AA seq
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MWHRLWWAWLSGRQTDRRRARAGPCQTQHRWLVFNDPAPGRRFSPPSTTLLSGKMSEGLP
LGAQESSSAALVGKLRIADRGMVEVLSEHPGELVRTDSPNFICSVLPTHWRCNKTLPIAF
KVVALGDIPDGTLVTVMAGNDENYSAELRNATAALKNQVARFNDLRFVGRSGRGKSFTLT
ITVFTNPPQVATYQRAIKITVDGPREPRRHRQKLEDVKTGALAFSERLSELEQLRRSSMR
VTPPHHHHHHAPTPNPRPALNPAQFSNPTHHTQIPDSRQMQTSPSWSYEQSYPYLGQITT
PTVHSTTPISPSRSSLSDLSSRLSGPDLTAFSDPRMSLDRPFSSLTSLPDSRYPDPRMHY
PTGAFTYTPNPVSNGAIGLTMATTPAGRYHTYLPPPYPTNAPQGQSGPFQAGSSPYHLYY
STAAGSYQFSMMAGGGGERSPPRIFPPCTNASTGSSLLHPSLPNQSEGVGVEAEGSHSSS
PTNMVPEAVWRPY
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atgtggcatcgattgtggtgggcttggctgagtggcagacagacagaccgacggagagcg
cgcgccgggccctgtcagactcagcatcgctggctggtttttaacgacccagcacctggt
cggcgcttctcccccccttccaccaccctgttgtcaggtaagatgagtgagggtctgccc
ctgggtgcccaggagagcagtagcgccgccctggtgggaaagttgcgtattgcagaccga
ggcatggtggaggtgctgtcagaacacccaggagaactggtgaggacagacagccccaac
ttcatctgttctgtcctacccacacactggaggtgcaacaagacgctgcccatcgcattc
aaggtggttgcccttggtgatatccctgacggtaccttggtcacggtgatggcggggaac
gatgagaactactcagcagagctccgcaatgccacggccgccctcaagaaccaggtggct
cgcttcaacgacctgcgcttcgtaggccgcagcggacgagggaagagtttcactctgacc
atcacggtgttcaccaaccctccccaggtggccacctaccagagagctatcaagatcacc
gtggacgggcccagagaaccacgccgccacagacagaagctggaggatgtgaagacggga
gcattggccttctccgagcgtctgagtgagctggagcagctaaggcggagctccatgagg
gtcacgccccctcaccatcatcaccaccacgcccccactcccaatccccggcccgccctg
aacccggcccagttcagcaaccccacacaccacacacagataccagactctaggcagatg
cagacatctccgtcgtggtcctatgagcagtcctacccctacctgggtcagataaccacg
cccaccgtccactcaactacgcccatatcacccagccgctcctccctcagtgacctgtcc
agccgcctctcaggccctgacctcacagccttcagcgacccccgtatgtccctggatcgc
ccgttctcctccctgacctcgctccctgacagccgctaccctgacccgcgcatgcactac
cctactggggccttcacatacacccctaaccctgtatccaacggcgccattggactgact
atggcgaccacccctgctgggcgttaccacacctatctccccccgccctaccccacaaac
gccccccagggccaaagtggaccgttccaggccggttcctctccctatcacctgtattat
agcacggccgctgggtcctaccaattctccatgatggcggggggaggcggggagcggtct
cctccgaggatattccctccctgcaccaacgcatccacaggctcctccctcctgcacccg
tctctgccaaatcagagcgaaggggtgggggtggaagcggagggaagtcacagtagctcc
cctaccaatatggtacccgaggctgtatggcggccatattga
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