Oncorhynchus gorbuscha (pink salmon): 124011105
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Entry
124011105 CDS
T07892
Symbol
fmr1
Name
(RefSeq) synaptic functional regulator FMR1 isoform X1
KO
K15516
fragile X mental retardation protein
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ogo03019
]
124011105 (fmr1)
Messenger RNA biogenesis [BR:
ogo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
124011105 (fmr1)
Factors involved in mRNA localization
Other mRNA localization factors
124011105 (fmr1)
mRNA cycle factors
Stress granule specific factors
124011105 (fmr1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FXMRP1_C_core
KH_9
Tudor_FRX1
FXMR_C2
KH_1
Agenet
KH-I_KHDC4-BBP
DUF150_C
DUF7636
Motif
Other DBs
NCBI-GeneID:
124011105
NCBI-ProteinID:
XP_046180079
LinkDB
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Position
LG23:23587511..23594941
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AA seq
581 aa
AA seq
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MDELAVEVRGTSGAFYKGYLKDVNESSVTVSFENNWQPERQIPFHDVRFPPPTGFQKEIN
ESDEVEVCAVYSRANDKEPCGWWLATVRMVKGEFYVIEYTACDATLNEIVTLERLRPVNP
NKPATKNSFLKINLDVPEDLRQMCLKDSHKDFKKALGAFNVTYDSDKKQLVILSVNEVTT
KRVQMLSDMHFRSLRTKLSLMQRNEEASRQLESSRQLASRFHEQFVVRDDLMGLAIGTHG
ANIQQARKVPGVTTIDLDEETCTFHIYGEDQEAVRKARSFLEFSEDVIKVPRNLVGKVIG
KNGKLIQEVVDKSGVVRVRIEAENNKKPPPLDEGMVPFVFVGTKESISNAKVLLDYHLNY
LKEVDQLRMERLQIDEQLRQIGGGGPRGGPGPGRPDKTIVDNGGLGMMGMGSQRGGKPFV
RGGGRGRRGGPSLASGTNSEASNASETESDHKDELSDWSLAPTEDLTGGFPKRPDTRKRG
GPRGRGGRGRGGGFKVAEDIQWTESRSRNTRDPKLRSLEDSLQIRVDGNNERSVHAAARG
PAGDGANRQRPVKERPIKKDNQESPGGEATAISLAMVNGVS
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
atggacgagctagcggttgaagtcagggggacgagtggggctttttacaagggctatttg
aaggatgttaatgaaagttctgtcactgtctcctttgaaaacaattggcagccagagcgt
caaattcccttccatgatgttcgatttcctccacccacaggttttcagaaagagataaac
gagagtgatgaagttgaggtatgtgctgtttattctagggccaatgacaaagaaccatgt
ggctggtggctggcgacagttcgaatggtgaagggtgagttttatgtcatagagtatacc
gcttgtgatgccacgctaaatgaaatagttacattagagaggttacgacctgtgaatcca
aacaagccagctacaaaaaactccttcctgaaaattaatctggatgtcccagaggacttg
cggcaaatgtgtttaaaagactcgcataaagattttaagaaggctttgggagcattcaat
gtcacttatgactcagacaaaaagcagcttgttattctgtccgtgaatgaggttacaacc
aaaagggtgcagatgctgagcgacatgcatttccggagcctgcgcaccaagctgtcccta
atgcagaggaacgaggaggctagccgccaactggagagctctcggcagctggcgtccagg
ttccatgaacagtttgtggtccgggatgatctgatggggctggccattgggacccacggc
gccaacatccagcaggccaggaaagtccctggggtcaccactatagacctggatgaagag
acgtgcaccttccacatctatggagaggaccaagaggctgtccgcaaggctaggagcttc
ttggagttttctgaagatgtcatcaaagtaccaaggaatttagtggggaaagtcattggg
aaaaatggaaagctgatccaggaagtggtggataaatctggtgttgttcgtgttcggatt
gaggcagagaacaacaagaagccacctccattggacgagggcatggtgccgtttgtcttt
gtggggacaaaggagagcatctccaatgctaaagtactgttggactatcatctcaactat
ctgaaggaagtggaccagctccgtatggagcgactgcagatagatgagcagctgaggcag
attgggggagggggccccagggggggcccagggcctgggcggcctgacaagaccatcgta
gacaacggtggcctggggatgatgggcatgggctcccagagaggagggaaaccattcgtc
aggggaggaggccgtggccgacgtggtggtccctctttagcctcaggcactaactctgag
gcttccaatgcctctgagactgagtcggaccacaaggacgagctgagtgactggtctctg
gcccccactgaggacctgactgggggcttccccaaacgacctgatacacgcaagagagga
gggcctcgcgggcggggagggagaggaagagggggaggcttcaaagtagctgaagacatc
cagtggactgagtcacgctcacggaataccagagaccctaagctgaggtctctggaagat
tctttgcagatcagagtggacggtaataatgagaggagtgttcatgctgcagccagaggc
cccgcaggcgatggcgccaaccgacagagacccgtaaaagagcgacctatcaagaaggat
aaccaggaaagccctggtggtgaagccaccgccataagcctggcgatggtgaacggggtg
tcgtag
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