Oncorhynchus gorbuscha (pink salmon): 124011155
Help
Entry
124011155 CDS
T07892
Name
(RefSeq) LOW QUALITY PROTEIN: obscurin-like protein 1
KO
K19574
obscurin-like protein 1
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ogo03036
]
124011155
Chromosome and associated proteins [BR:
ogo03036
]
Eukaryotic type
Centrosome formation proteins
3M complex
124011155
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
I-set
Ig_3
ig
Ig_2
V-set
Ig_MYOM1
VEGFR1-3_N_Ig-like
Ig_4
Ig_6
C2-set_2
Ig_SEMA-3_4_7A
VEGFR-1-like_Ig-like
Transglut_i_TM
Motif
Other DBs
NCBI-GeneID:
124011155
NCBI-ProteinID:
XP_046180184
LinkDB
All DBs
Position
LG23:66041786..66075130
Genome browser
AA seq
2203 aa
AA seq
DB search
MDIFGGAPRVLGYSRPVAAQCGTDAVLQCKIGGDPRPEVVWEKKNVQILSEGRYRLSEEG
QAYFLHITGVGLEDAGQYICKASNSVGETCAPATLKVERNSQERQGAQKQTEVNGVQQTR
LENGEPTAVEKENGEESERDKKKQRYEGEPLLSDDRPHFLIKPLSLRVDRGEDAAFSCKL
SGNPLPQVVWEKDGKNLSDIFESAHFNVSSQDGGWFQLKIFRTRMPDGGVYTCRAHNNQG
GALAGAVLLVELVPERQESGASTSNGHSNGQTSPRGMRHRMGRHGLSRQPDEPNLNSANV
KKFAVSEGKHAKFRCFVTGKPKPEIIWKKDGAPLEAGRRHLLFEDREGYYTLKVMYCKHQ
DTGLYVCAASNALGHTLSSVYLTVKAPAVRFRRSLQDVEVRERGMAVLECEVPNEGIPTA
WYLEDQRLQAGGKYGIEQNGARRRLTIRDVGADDDGVYLCEMPDGGKSIAELAVKGTIVK
KLPRKLDVLEGENAVFCVEVEEENMDVHWFKDGLKLRESHQTILKSFGKTHMLVFVNVCH
GDTGVVTFVVGRSKTSSRLRVKAARHSPPICPVGVEMDVDRPNSVLLSWEPAPTSQTTTR
SVYVLERQEVGSQEWLRCATSDTATSAEVMGDSVPCEGDYHFRVCCINKYGRSGHVEFPK
VVHLVPGPKIRTPLQGCEVTEGEDALFSINLSVMVTGTWFLNSTQLQDSQHYSIQQAKTQ
HSLVIHSTKVEDHEAEVTFIANGVRDSAVLKVQAAVVKFSPMSESDSNKRVETGDPVVLY
CEVSHPSASVGWFKDGVELQVTDSLNIQSEGNMRRIVIRSAEFTDSGVYTCETMGDVINF
NVEVEGPPVQFSEVPEEELQKSAMELDPVVLTCEVSREDANATWYKNGVEVQASDNMTIQ
TEGTMRRLIIRCAETSDAGTYSCQSGDNSLSFTVNIKEPPVMIVEPKEDVVMEGHISEQV
VLQCELSRSSGEVHWFKDGLQVLETENVQLTSEGPYRRLTVLCGSAEDSGEYVCDTDGDS
VFFQVTITELPVRIVSPTESELELTSLTSERLELSCEISQPDAQVRWYRDGLEVEESASL
ILESRGAHRTLVIPATTVEDTGEYVCDTEDDSVTWLVTISEPPVKLARSETMSDVKDCFS
GEPIVLEIEVSRFNAEVIWMKDGGEVEESSDVTITEDGLIRRLTICTPVPGDSGKYTCLA
SDDLIDFQVKVSEPPVKIVNRSEVKTEVKSLPSDDIELECELSRANAVAKWYKDGRRLNE
DERFYEEEEGAFRSLVILNAELEDCGDYFLDAGDDNITFHVTVQEPPVTILGNSEDTDYQ
EMVAGDDLILACEVSRANAPVQWYCNDRQLTSDDRTYMESYGTLRKLILSDILPSDSGKY
MCDAIDDKMVTMVKIQDSPVTFVDKQAVNIITGYEAESVTLMGVVSKENAPVRWLKDWTP
VIGDRFHTGVDGANRFLTIDPLRRSDSGEYTVDANTDEMHFSLLVKEMRVKFAKPLHDTV
AHADGMVTIRCEVCKPKADVQWLKDGVEIVPSRRFTIRADGVERSLTIHRLTRDDTGEYA
CESKDDRTAARLRVEMPRVVEFLTELHNTMVLEGEDATFKCVVSPEDVQLVWGMDGELVV
MGDRFQATQNGLCHTLVIKSCQILDSSKITVEAEGNVSKATLKVQEAQVTFTKKMEAVMA
EEYGEATMETEVSLDTGEVQWMRQGVVIQPGPRHTLGQSGRKRSLTICNLNLSDRGTYRC
ETLHDRTQVKLNVEPRKIAIRKGLVETDTFERETASFEVELSHTGVEGVWQKDGIRVKPS
NHWRVSCNGLVHGLTLSNLTLEDTGTIVFSAEGVRTSARLTVKETPVTLMKKLVDMRLEQ
GSPATLECELSRQNVEVRWLKNGTELKPGKTQYRIYSMGRKRFCQLLQCSLSDAGTYTCD
LGDVNTSCNLEVYEPEVEVLHGLEDLYVQEDQNAVFMCEVSMEDVTGEWYKDGHKIRPTS
TIKIRTEGTKHFLLMCNVKAEDSGEIRFVTKQTESTAYLEVEEAPVSIVKPLRDRTALEK
HRVILDCTVSTPRCDLTWYRGKAELVSSDRLEIHSDGCYHKLTIHEATVEDEGTYSIEVG
EHTSTAQLLVEAQSLVIETELQDVVVTAPDQACFQCEVSVAISRPPVWTLNGETIQSSPD
VRLENHGTIHKLNLKQTRPDMSGTVTFAMGKAKSSAKLNVMWK
NT seq
6612 nt
NT seq
+upstream
nt +downstream
nt
atggacatattcggtggtgccccccgtgtactgggctactcacgccccgtggcggcacag
tgtggcacggacgccgtcctgcaatgcaagatcggcggcgaccctcgtcccgaggtggtc
tgggagaagaagaatgtacagatcctgtcagagggacgctacaggctgtcggaggagggc
caggcctacttcctacacatcactggggtcgggctggaggacgctggccagtatatctgc
aaggccagtaacagcgtgggtgagacgtgcgcccctgccacactgaaggtggagaggaac
agtcaggagcggcaaggagcgcagaaacagacagaggtcaatggggtgcagcaaaccagg
ctggagaatggagaaccaacagcggtagagaaggaaaatggagaggagagtgagcgggac
aaaaagaagcagcgctatgaaggggagcccctgctgtcagacgacagacctcacttcctc
atcaagcccctctccctgagggtggaccggggcgaggacgcagccttctcctgtaagctg
tcgggcaaccctctgccccaggtggtgtgggagaaggacgggaagaatctgagcgacatc
ttcgagagcgcccacttcaacgtcagcagccaggacggaggctggttccagctgaagatc
ttccggacgaggatgcccgacgggggtgtctacacctgcagagcccataataatcaagga
ggggcgctggcgggcgcagtgctgcttgtggagctcgtcccggaacggcaggagagcggg
gcgtccacgtcaaatgggcacagcaacgggcagacatcacctcgtggtatgaggcacagg
atgggaagacacggtttgtcgagacagccggatgagcccaatctgaactctgccaatgtg
aagaaatttgcggtgtcggaggggaaacatgctaagttccgctgcttcgtgacagggaaa
cctaagcctgagatcatctggaagaaggacggagcgcccctagaggctgggaggcgtcac
cttctgtttgaggacagagagggttactacacgctcaaagtgatgtactgtaaacatcag
gacacagggctgtacgtgtgtgctgcgtccaacgctctgggacacactctcagctctgtt
tacctgactgtcaaagctccagcggtgcggttcaggcggtctctgcaagacgtggaggtg
agagagagaggcatggccgtgttggagtgtgaggtacctaatgagggcatccccactgcc
tggtacctggaggaccagagactacaggcagggggtaaatacggcatagagcagaacgga
gcccggcgcaggctcactatccgagatgtaggagcagacgacgatggggtctatctctgt
gagatgcctgatggagggaagagtatcgctgagctggccgtcaaaggcacaattgttaaa
aaacttcctcgaaaactagacgtgttagagggggagaatgctgtgttctgtgtggaggta
gaggaggagaacatggatgtccactggttcaaagatggcctgaagctacgcgagagccac
cagactatcctcaagtcctttggtaaaacccacatgctggtgttcgtcaacgtctgccac
ggggacactggggtcgtgaccttcgttgtgggaagatccaagacctcgtcccggctcaga
gtcaaagctgccagacacagccctcccatctgtccagtgggggtggagatggatgtggac
aggcccaacagcgtgctcctctcctgggagccggcccccaccagccagaccaccacccgc
tccgtctatgtcctggagagacaggaagtgggatcacaggagtggctgaggtgtgcgacc
tccgacacggcgacctccgcagaggtcatgggcgacagcgtgccgtgcgagggcgattac
cacttccgtgtctgctgcatcaataagtatggccgtagtggacacgtggagttccctaaa
gtcgtccatcttgtgccaggtcccaagatcaggacccctctccagggctgtgaggtgacg
gagggggaggacgccctgttctccatcaatctgtcagtgatggtgacgggcacctggttc
ctgaacagcacccagctacaggatagccaacactactctatccaacaggccaagacacag
cactccctggtaatccacagcaccaaggtggaagaccacgaggcagaggtcaccttcatc
gccaacggagtcagagactcagcggttctcaaggttcaagctgcggtggtaaagttcagc
ccaatgtcagagtcagacagtaacaagagggtggagactggtgaccctgtggttctgtac
tgtgaggtgtcccacccctcagccagcgtgggctggttcaaggatggggtggagctacag
gtgacagacagcctcaacatccaatcagaaggcaacatgaggaggatcgttatccgatcg
gctgagttcaccgactctggcgtgtacacatgcgagacgatgggtgatgtcatcaatttc
aacgtggaggttgaaggtccccctgtgcagttcagtgaggtccctgaggaggagctccag
aagtctgctatggagctggatcctgtggtgctcacctgtgaggtttccagagaggacgcc
aacgctacctggtacaagaatggggttgaggtccaggccagtgataacatgaccatacaa
acagagggcaccatgaggagactgatcatccgttgtgctgagacctcagacgcaggaacc
tacagctgtcagtcaggagacaacagcctctcattcactgtcaacatcaaagagcctcca
gtgatgatcgtggagcccaaggaggacgtggttatggagggtcatatctctgagcaggtg
gtcctgcagtgtgagctgtcccgctccagcggtgaggtccactggtttaaggacggcctt
caggtcctggagacggagaacgtccagctgacgtccgagggaccgtacaggaggctgacc
gtcctctgcggctcggcagaagattccggagagtacgtctgcgacacggatggagactct
gtgttcttccaggtcaccatcacagagcttccggtgcgaatcgtctcccctactgagtct
gagctggagctgaccagcctgacctctgagaggctggagctcagctgcgagatctcccag
cctgatgcccaggtacgctggtaccgagatgggctggaggtggaggagagcgcctctctc
atcctggagtccaggggagcccacaggacactggtcatccccgcgaccactgtggaggac
acaggagagtatgtgtgtgacacagaggatgactcagtcacatggctggtcactatttca
gagcctcctgtgaagctggcccgctctgaaacaatgtctgacgtaaaggactgtttctct
ggagaacccatcgtcctggagatcgaggtgtcacggttcaacgctgaggtgatctggatg
aaggatggaggagaggtggaggagagcagtgatgtcaccatcactgaggatggactcatc
cgccgcctcaccatctgcacgcccgtcccgggcgactctgggaaatacacctgtcttgcc
tcagatgacctcatcgacttccaggtcaaggtgtcagagcccccagtgaagatcgtgaat
aggtcagaagtcaagacagaggtcaagtccctaccctctgatgacattgagttggagtgt
gaactctccagggccaatgccgtcgctaagtggtacaaagatggccgccggttaaacgaa
gacgagaggttctatgaggaggaagaaggggcgttccgctccctggtgatcctaaatgct
gagctggaagattgcggagactacttccttgatgccggagatgacaacatcaccttccat
gtcactgtgcaagagcctccagtgaccatcctggggaactctgaggatacagactaccag
gagatggttgccggggatgacctgatcctggcctgtgaggtgtcccgggccaatgcccct
gtccagtggtactgtaacgacagacagctgactagcgatgaccggacctacatggagagc
tacggcacgctgaggaaactcatcctctctgacatcctgccctctgactctgggaagtac
atgtgtgatgctatcgatgacaagatggtcaccatggtgaagatccaagactcccccgtc
accttcgtagacaaacaagcagtgaacatcatcacgggttacgaggcagaaagtgtgacg
ctgatgggggtcgtgtctaaggagaacgctccggttcgctggctcaaggactggacaccc
gtcataggggaccgcttccacacgggggtcgacggcgccaaccggttcctcaccattgac
ccgctgagaagatcggacagcggagagtacacagtagacgccaacacagacgagatgcat
ttcagtctgctagtcaaagagatgagggtgaagtttgccaagccgctccacgacactgtg
gcccatgcggacggcatggtgaccatacgctgtgaggtgtgtaagcccaaggcggacgtc
cagtggttgaaggacggtgtggagatcgtccccagcaggaggttcaccatccgggccgac
ggcgtggaacgcagcctgaccatccacaggctgaccagggacgacacgggggagtacgcc
tgcgagtccaaggacgaccgcaccgccgccaggctcagagtcgagatgccccgcgtggta
gagttcttgacagagctccacaacaccatggtgttagagggagaggacgccaccttcaag
tgcgtggtgtcgccagaggacgtgcagctggtgtgggggatggacggcgagctcgtcgtc
atgggtgaccgtttccaggcaacgcagaacggcctgtgtcacaccctggtgatcaagagc
tgtcagatcctggactcctctaagatcacagtggaggctgaggggaacgtgtctaaggcc
accctcaaagtacaggaagctcaggtgaccttcactaagaagatggaggcggtgatggcc
gaggagtacggagaggctaccatggaaacagaggtcagtctggacacgggcgaggtccag
tggatgaggcagggtgtggtcatccagccaggaccccgacacaccctgggccagagcgga
cgcaaacgcagcctgaccatctgcaacctcaacctctctgaccgcggaacctaccgctgt
gaaaccctgcacgaccgcacgcaggtcaaactcaacgtggagccccgtaagatcgccatc
cgtaagggtctggtggagacagacacatttgagcgggagacggcctccttcgaggtggag
ctgtctcacactggcgtggagggcgtctggcagaaggacggtatccgggtcaaacccagc
aaccactggcgggtgagctgcaacgggctggtccacggactcaccctgtccaaccttacc
ctggaggacacgggcaccatcgtcttctctgcggagggagtccggacctctgccaggctc
actgtcaaggagactccagtgactctcatgaagaagctggtagacatgagactggagcag
ggctctcctgccacattggagtgtgagctgtccaggcagaacgtggaggtcaggtggctg
aagaatgggacagagctgaagccagggaagacccagtaccgtatttactccatggggagg
aagaggttctgtcagctgctgcagtgtagcctctctgatgcaggcacctacacctgtgac
ctaggagatgtcaatacgtcctgtaacctggaggtctatgagcctgaagtggaggtgcta
cacgggctggaggacctgtatgtccaggaggaccagaatgctgtgttcatgtgtgaggtg
tccatggaggacgtgaccggggagtggtacaaggatggacacaagatacgacccactagc
accatcaagatacgcacagaggggaccaaacacttccttctcatgtgcaacgttaaagct
gaggattctggggagatccgctttgtgaccaaacagacagaatcaacagcctacctagag
gtggaagaggcccccgtgtctatcgtgaagcctctgagagaccgcacggctctggagaag
caccgcgtgattctggactgcaccgtgtccacgccgcgctgtgacctcacatggtacaga
ggcaaggcagagctggtgtcttctgataggctagagatccacagtgacggctgctaccat
aaactgaccatccacgaggcgactgtagaggacgagggtacctatagtatagaggttggg
gagcacacctccacagcccaactcctggtggaagcccagtccctggtgatagagacagag
ctgcaggatgtggtggtgacggctcctgaccaggcctgtttccagtgtgaggtgtccgtg
gccatcagcaggcccccagtctggactctgaatggagagaccatccagtccagccctgat
gtccgcttagagaaccacggaaccatccacaaactgaacctgaaacagaccagaccagac
atgagtgggacggttaccttcgccatgggaaaggccaagagcagcgccaaactgaacgtg
atgtggaagtag
DBGET
integrated database retrieval system
