Oncorhynchus gorbuscha (pink salmon): 124011160
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Entry
124011160 CDS
T07892
Name
(RefSeq) toll-like receptor 13
KO
K18808
toll-like receptor 13
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
ogo04054
]
124011160
Pattern recognition receptors [BR:
ogo04054
]
Membrane-bound pattern recognition receptors
Toll-like receptors
124011160
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
TIR
LRR_5
LRR_9
TIR_2
LRR_NXF1-5
LRR_EndoS
DHU1_N
Motif
Other DBs
NCBI-GeneID:
124011160
NCBI-ProteinID:
XP_046180190
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All DBs
Position
LG23:complement(60672382..60676266)
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AA seq
972 aa
AA seq
DB search
MTLKITMPGEQSGSTFSQLRLFLCFLMYCWVLADPVCGYFLKNCTIRGNLSDSSNMKVLC
EKRNLEVIPKDIPRKVSVLDVAMNNISKIGKFDFKGLSNLKILNMSRNQISSVDDGSLRH
LEALQELGLAHNRLTTLSDHLFQGLANLSLLHLDNNVIATISSSSFQTLSSLKTVNLTNN
NLYNMKEVQPIVQLPHLQELYIGSNRFTSFQSQEISNTSIELRLLDLSRNPLGIFRITAD
VLPYLEVLDIAYCGQIGHMEWDVLNRSFLSNVNRLNLSGIEMSFERMGMVLQTVNSSLVH
LRLNDLVKGSKLKVKALTDIACHIPTLSVLRLEYNNIGNLSEEFLQSCKHMTEVDISNTG
LTQLSEFSFRSMEQLSTLKLGHNRLSSVPKATRNLPTLKILDLSFNIINKLGCSDFSNLK
GLTQLFLFHNQIPNLPGCVFQYLKELSILKLGSNKILTLNEAFMNGLHKLETLNLAGNKL
SSIRKGEFKSLTSLKTLLLYDNQIASMEDGAFEGLVNLTELNLGSNKITQIDIRNTVLMG
LPSLRTLDISCNYITYVNDGKLDPPPFSHLTSLENLQIHSQRHKGLCHLPINFLEGLKYL
LAFKAGNLNIKDLHPNTFIHTPRLWYLDVSKNEFTSLTPKLFHPTPRLNRMYLSKAQLQS
LDFLIGANLSRVTFLQVSKNDITVVNETVLQSLPALTYLDMQDNPFTCGCSDAWFVQWME
NDNQTQVVGAGELTCNYPADLKDTKLLDVELQFCTVDLGLYCYISTTCLVLLTLVASFAY
HFLKWQVIYGYYLFLAFLYDTKQRNKRMSHGCQYDAFISYNAHDEPWVLRELLPELEGEQ
GWKLCLHHRDFQPGKPIIDNIMDGIYGSRKTICVISHRYLESEWCSREIQVASFRLFDEQ
KDVLILVFLEEIPTHQLSPYHRMRKLVKKRTYLSWPRAGEQTGVFWRQLRLALESKDGSA
GENPILSGVEAL
NT seq
2919 nt
NT seq
+upstream
nt +downstream
nt
atgacactcaagataaccatgccaggagaacaaagtggttctacattctctcagctgaga
ctctttctttgtttcctgatgtattgctgggttcttgctgatccagtatgtgggtacttc
ctgaaaaactgcacaatccggggtaatctcagtgactcctctaacatgaaagtactctgt
gaaaagaggaacctagaagtcataccaaaagacattccacggaaagtaagcgttttagat
gtggccatgaataacatttccaaaattggaaagtttgattttaaaggcctatcaaacctc
aaaattctaaacatgtcaagaaaccagatctcttcagtggatgatgggtctctcagacac
ctagaggctcttcaggagctgggtctggctcataacagactcacaaccctgtcagaccat
ttgtttcagggcctagccaacctctccctgctacatctggacaacaacgtcattgcaacc
atcagctcctcatcatttcagactctctccagtttgaagacagtgaatttaaccaataac
aacctttataatatgaaggaagttcagcccatcgtacaattaccacacttacaggagttg
tacattgggagcaacagattcacctctttccagtcacaggaaatatcaaacacttctata
gagctgaggctgttggatttatcccggaatccattgggaatcttcaggatcacggcagat
gttcttccttaccttgaggtgttagacatcgcctactgtggccaaattggacacatggaa
tgggatgtgctgaacaggtcttttctgagcaacgtcaatcgtctcaacttgagcggcatt
gagatgtctttcgagaggatgggtatggtactgcagactgtcaactcctcattagtccat
ctgagattgaatgaccttgtcaaaggctcaaagctcaaggtcaaggctctcactgatatt
gcctgccatatacctacactcagcgtgctccgactagaatataacaacataggtaatctc
tctgaggaatttctccagtcatgtaaacacatgacagaagtggacatatcaaatactggt
cttactcagctgtctgaattttcattcagatcaatggagcaattaagtactttgaaactg
ggccacaacaggctttcttccgtaccaaaggccacaagaaacctacctacactgaagatc
ctggatctcagcttcaatatcatcaataaattgggctgctcagatttctccaatcttaaa
ggactcacacaactctttcttttccataatcaaatccccaaccttccaggatgtgttttc
cagtatttgaaagaattaagcatccttaaactgggatcaaacaaaatcctgaccttgaat
gaagccttcatgaatggtttgcacaaacttgagactttgaatttggcaggcaataaactg
agctctataagaaaaggagagtttaaaagcttaacatcactcaagactttacttttatat
gacaatcagattgccagtatggaagatggagcctttgagggattggtcaaccttacagaa
cttaacctgggctcaaataagatcactcaaatagacataagaaatacagtgctcatgggg
cttccaagcttaagaactcttgatatatcctgtaattacatcacttatgtaaatgatggt
aaattagaccctccacccttctctcatctgacatctctggagaacctgcagatccatagt
cagcgtcacaagggactgtgtcatctaccaatcaacttccttgaaggtctgaaatattta
ttggcattcaaggcagggaatctcaatattaaggacctgcacccaaacacatttattcac
acaccacggttgtggtaccttgatgtcagtaagaatgagttcacatccctcacgccaaag
ctgtttcacccaaccccaaggctcaacagaatgtacctgtccaaagcccaacttcagtcc
ttagatttcctcataggagcaaacctcagtagagtcactttcttgcaggtgagcaagaac
gacataacagtagtcaatgagacagtgttgcaatctctccctgccttgacatacctggac
atgcaagataatcctttcacctgtggctgcagtgatgcttggtttgtccagtggatggag
aacgacaaccaaacacaagttgttggtgcaggagaattgacctgcaactatcctgccgat
ctaaaggacaccaagctgttggatgttgagcttcagttctgtacagtggatttaggactt
tactgctacatctctaccacttgtctggtcctcctcaccctggtagcatcttttgcctac
cacttcctgaaatggcaggtcatttacggctattatcttttcctggctttcctctatgac
accaagcaaaggaataaacgcatgtctcatggctgtcagtacgatgccttcatttcctac
aacgcccacgatgagccctgggtcctgagggagcttctgccagagctggagggagagcag
ggttggaagctgtgtctccaccaccgggacttccagccaggcaaacccatcatagacaac
attatggacggcatctacgggagccgcaagaccatctgtgtcatcagccaccgctacctg
gagagtgagtggtgctcccgggagatccaggtggccagcttccggctctttgatgagcag
aaggacgtcctgattctggtgttcttggaggagatccctacccaccagctgtcaccctac
caccggatgaggaagctcgtgaagaaacgcacatacctgagctggcccagagctggggag
caaaccggggtcttctggcggcaactacggttggctttagagagcaaggatggctctgct
ggggaaaatcccatcctctctggggtggaggctctgtaa
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