Oncorhynchus gorbuscha (pink salmon): 124011196
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Entry
124011196 CDS
T07892
Name
(RefSeq) E3 ubiquitin-protein ligase synoviolin-like
KO
K10601
E3 ubiquitin-protein ligase synoviolin [EC:
2.3.2.27
]
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo04120
Ubiquitin mediated proteolysis
ogo04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
124011196
04120 Ubiquitin mediated proteolysis
124011196
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ogo04121
]
124011196
Enzymes [BR:
ogo01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
124011196
Ubiquitin system [BR:
ogo04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
124011196
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_SYVN1_N
zf-RING_2
zf-C3HC4
zf-rbx1
zf-C3HC4_2
zf-RING_UBOX
zf-RING_16
zf-C3HC4_3
zf-RING_11
zf-RING_5
zf-ANAPC11
zf-RING-like
zf_RING_Vps8_fungal
FAR1_N
zf-RING_Vps41
zinc_ribbon_16
FANCL_C
Motif
Other DBs
NCBI-GeneID:
124011196
NCBI-ProteinID:
XP_046180264
LinkDB
All DBs
Position
LG23:complement(8392386..8405063)
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AA seq
625 aa
AA seq
DB search
MVRAALVTATSLALTGAVIAHAYFLKHQFYPTVVYLTKSSPSMAVLYIQAFVLVFLLGKF
MRKVFFGQLRAAEMEHLIERSWYAVTETCLAFTVFRDDFSPRFVGLFTLLLFIKCFHWLA
EDRVDFMERSPNISWVFHFRVFSLMLLLGVLDFLFVNHACHSIITRGASVQLVFGFEYAI
LMTMVFTTFIKYTLHTVDLQSDNPWDNKAVYMLYTELFTGFIKVLLYMAFMTIMIKVHTF
PLFAIRPMYLAMRQFKKAVTDAIMSRRAIRNMNTLYPDATPEDLLASDNVCIICREEMVA
GAKKLPCNHIFHASCLRSWFQRQQTCPTCRMDVLRASNPNQPPAPAPAQPPAPAAPVNAP
VPGPPGNVGPGMMPHFPPGLFPFWGPFPGAAPPAGAAGAPGATETPGATEAAQTQGAGTT
GASTVGAAPAPGGPMPGFPFHSFPPPPFPSAPWLTMPPPPPPFVSSMPPPPPALSTMSEA
ELRELEQQGRRGLEARLQCLHNIHTLLDAAMLNIDQYLTTVATLIPPQSETSSAAGEASG
SSPPSTSAETQENDSQSSTAAEPEAVNGATGFSQPDSTTLGDSEDQRDEEEGDGEEVGED
GEPNPSELRRRRLRKLETTPPPPDH
NT seq
1878 nt
NT seq
+upstream
nt +downstream
nt
atggtgcgtgcagcgctggtgactgccaccagtctggctctgactggcgctgtgattgcc
catgcctactttctcaaacaccagttctaccccactgtggtctacctcaccaagagtagc
cccagtatggcagtgttgtacatccaggcgtttgtgttggtgttcctgttgggaaagttc
atgcgtaaagtcttcttcgggcagctgagagctgcagagatggagcatctgatagagcga
tcctggtatgctgtcacagagacgtgtctggcctttaccgtgttcagggatgacttctct
ccccgcttcgtaggcctcttcaccctgctgctcttcatcaagtgcttccactggctggct
gaggacagggtggactttatggagagaagtcctaatatatcctgggtcttccacttcagg
gtgttctctctgatgttgttgctgggagtcctggacttcctgtttgtcaaccatgcctgt
cacagtatcatcacacgaggggcctctgtccagctggtctttggatttgagtatgccatc
ctgatgaccatggtgttcaccaccttcatcaagtacaccctccacactgtcgacctccag
agtgacaacccctgggacaacaaagcagtctacatgctctacaccgagctcttcactggt
ttcatcaaggtcctcctgtacatggcgttcatgaccatcatgataaaggtgcacaccttc
cccctattcgccatccggcccatgtacctggctatgaggcagttcaagaaagctgttacg
gatgcaataatgtcacggcgagctatccgcaacatgaatacactttacccagatgccact
cctgaagatctgctggcttcagacaatgtatgtatcatctgtcgtgaagagatggtggct
ggagccaagaaacttccctgcaaccatatcttccacgcaagttgccttcgctcctggttc
cagagacagcagacgtgtcctacatgtcgtatggatgtcctccgggcctctaaccccaac
cagcctcccgccccagcgcctgcccagcctcctgccccggcagcacctgtcaacgcccct
gtccctggtccacctgggaacgttggccctggaatgatgccccacttccccccagggctg
tttcctttctgggggcccttccctggagcggccccccctgctggtgctgctggcgcccca
ggggccacagagaccccaggggccacagaggcagctcagactcagggagctggcaccact
ggggccagtacagtcggtgctgctcctgctccaggaggccctatgcctgggttccccttc
cactccttcccacccccaccgttcccctcagctccgtggctgactatgccaccaccccct
ccaccgtttgtgtcatccatgccccctcctcccccggccctgtccaccatgtcagaggct
gagctgagggagctggagcagcagggccgtagaggcctggaggccagactgcagtgtctc
cacaacatccacactctactggacgctgccatgctcaacatcgaccaatacctcactacc
gtcgccacactcattcctcctcagtcagaaaccagcagcgcggctggagaggccagcgga
tcatctcctccctccactagtgcagaaacccaggagaacgactctcagagcagtacagcc
gctgaacctgaagctgtgaatggggccacaggtttctcccagccagactctaccacgttg
ggcgacagtgaagaccagcgggatgaagaggaaggagatggagaggaagtcggggaagac
ggagagcccaacccttcagagctgaggcgccgtcgtctccgcaaactcgagaccacaccc
cctcctcctgaccactaa
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