Oncorhynchus gorbuscha (pink salmon): 124011310
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Entry
124011310 CDS
T07892
Symbol
lrwd1
Name
(RefSeq) leucine-rich repeat and WD repeat-containing protein 1
KO
K24733
leucine-rich repeat and WD repeat-containing protein 1
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ogo04990
]
124011310 (lrwd1)
Domain-containing proteins not elsewhere classified [BR:
ogo04990
]
Other domain-containing proteins
WD40 repeat (WDR) domain-containing proteins
124011310 (lrwd1)
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Gene cluster
GFIT
Motif
Pfam:
WD_LRWD1
LRR_LRWD1
Beta-prop_EML_2
WD40_CDC20-Fz
LRR_4
WD40
LRR_9
LRR_8
WD40_WDHD1_1st
Beta-prop_EML
WD40_Prp19
Beta-prop_TEP1_2nd
LRR_At5g56370
LRR_14
WD40_MABP1-WDR62_1st
LRR_EndoS
Motif
Other DBs
NCBI-GeneID:
124011310
NCBI-ProteinID:
XP_046180501
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Position
LG02:complement(83580102..83591589)
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AA seq
745 aa
AA seq
DB search
MGKITEKLLLEKCTPKNTKLEEVKTLNLSKLGLKTSDLPVPLLSRLRCLEQLDLSGNRLQ
EMPSGLVLPSLRSLDLTNNEMEDVTTLDTLTTLEDLRIEDNLYITVNDNYKLIILLPKLR
FYNGKDISNTANHVRYANSENLRKRVLALWETSFSLPDHRTAEELAIVERDFVSAVRHKV
KYGPSSLTDYTKWRVEMIAKEHLRSLTEPNEEYRDTEEPADTKKNCNFPFPAKRKRSASA
VKCDVTLNPQKIARASVQAEDSPHRSSRLQSIPHKAERPISTTHKAAQIPATPIRGQSKL
LVTPRNGLREKRHQSKEDMPLAKRTRKSATQQWSTEVNETPGKVICTKSPHSSQEPVSLQ
PLHVLQCHSKQDSPDDFSTQLWACSFQPPLDYNGDVNDATRIVATCGGESVCLIDCETGL
VMKKYKVPGEEFFSLAWSTVLMSRKGNVCMRSCSILAAGGKRGLVKLLHPRANMAYGEFR
ASRKALSILCFSPRQGNLLFTGSYDKNILLWDIGGVDSDYNFKVTQLLVLETTSTPLHFC
LPPATPDTHLIAACEKGLHSYNIQLNKDSKKRSEEMEITFPVYDKDHDYHTIDGLGFLTN
DVVASKSHMQGSIYLWSWNDTRAQRLNKKKKKKKVCAVILVELQWSSTDIPYLSLNTCPS
KGYVVCGDERGRLWTYHVTDLKANFRSGKAIPATEILAWPLPVRNGQGPVEGPPINSVAM
DPELRYLVALSDKNMAVVWIRTESS
NT seq
2238 nt
NT seq
+upstream
nt +downstream
nt
atggggaaaataacagagaaactactgctggagaaatgcactccaaaaaacaccaaactg
gaagaagtaaagacactaaatctctccaagctcggtctgaagaccagtgacctgcctgtc
cccctgctttctcgccttcgctgtctggaacagttggacctgtctgggaacagacttcag
gagatgccctctgggctagtcctgccctccctacgctctctggacctgaccaacaatgag
atggaagatgtcaccactctggacacactgaccaccctagaggatctgaggattgaggac
aacctctacatcactgtcaatgacaactacaagctgataatcctcctgcccaagttgagg
ttttacaatgggaaggatatcagcaatacagccaaccacgtacgctatgccaacagtgag
aacctcaggaagagggtgttagcgctgtgggagaccagcttttcactccctgaccaccga
acagcagaggaactagccattgtggagagggattttgtcagtgcggtgcgtcataaggtg
aaatatggacccagctctctgaccgactacacaaaatggagggtggagatgatagctaaa
gagcaccttcgctctttgaccgagccaaatgaagagtacagagatacagaggagcctgct
gatacaaagaagaactgcaattttcctttcccagccaagaggaagcgttccgcctcggct
gtcaaatgcgacgtaaccctaaaccctcagaaaatagccagagcgagtgttcaagccgag
gacagcccacacaggtcaagccgtctgcaaagcatccctcataaggcagagcggcccatc
agcaccacgcataaggcagcacagatcccagccacccccattaggggccagtccaaactc
ctggtgacccccaggaacggcctgagagagaagcgacatcagtccaaagaagacatgcca
ctggccaaacggactcgcaagtctgccacgcaacagtggtccacagaggtcaacgagaca
cctgggaaagtaatctgcaccaagtctccgcattcatcacaggagccagtgagtctgcag
cctcttcacgtcctgcagtgtcacagtaaacaggacagccctgatgactttagcacccag
ctgtgggcctgttccttccagcccccgctagactacaatggagatgtgaatgatgcgact
cgtattgtggcaacgtgtggaggagagtctgtgtgcctgatcgactgtgagacgggactg
gttatgaagaagtataaggtccctggtgaggagttcttctctctggcatggtcaactgtg
ctgatgtcacggaagggcaacgtttgcatgcggtcctgcagtatcttggcggcagggggg
aagcgaggcttggtgaaactgcttcaccccagagccaacatggcgtacggagagttcaga
gccagccgcaaagccctctccatcctctgcttcagtccccgccagggcaacttgctcttc
actgggtcgtacgataaaaatatattattgtgggacattggcggagtggacagcgactac
aatttcaaagtcactcagctgttggtgttggagaccacctccacacccctgcacttctgc
ctaccccctgccaccccagacacacacctcatcgctgcctgtgagaaggggctgcacagc
tacaacatccagctcaacaaagactccaagaaaaggtctgaggagatggagatcacattc
cctgtgtatgacaaggaccatgactaccacaccattgatggcttgggattcctcacaaac
gatgtcgtcgcctctaagagccacatgcagggctcgatctacctgtggagctggaacgac
acgcgagcccagcggctcaataagaagaagaagaagaagaaggtatgtgctgtgatcctg
gtggagctgcagtggtccagcacggacatcccctacctgtccctcaacacctgccccagt
aaaggctatgtggtgtgtggtgacgaaagagggagactgtggacgtaccatgtaacagac
ctcaaggccaactttaggagtggcaaagcaattcctgccacagagatcctggcatggccg
ttacctgtgaggaatggacagggcccagtggaaggtccccctatcaacagtgtggccatg
gaccctgagctcagatacctggtggccctcagtgacaagaacatggcagtggtgtggata
agaacagagtcttcctga
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