Oncorhynchus gorbuscha (pink salmon): 124011346
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Entry
124011346 CDS
T07892
Name
(RefSeq) SLIT and NTRK-like protein 1
KO
K25832
SLIT and NTRK-like protein 1
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
124011346
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
LRR_LRWD1
LRR_14
LRRNT
Motif
Other DBs
NCBI-GeneID:
124011346
NCBI-ProteinID:
XP_046180584
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Position
LG23:complement(58278326..58282956)
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AA seq
699 aa
AA seq
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MLLWIVLLKAALCVAIGNVTRDICKEQICSCNEIEGDLHIDCEKRSFTNLHHLTGPSSQF
YHLLLHGNSLSRLFPNEFANFYNAVSLHLENNGLHDIVPGAFLGLQLVKRLHINNNKIRS
FRKSTFLGLDDLEYLQADFNLLRDIDPAVFRDLNKLEVLILNDNLISALPINVFQHVPIT
HLDLRGNRIKTVPYEGVLEQIPGIAEVLLEDNPWDCNCDLVSLKEWLENIPQNALIGRVI
CEAPTPLQGNDLNETSEMDLCPSIKSGADESLVAPPTQEETSVPGPVPTPYKASGDPGSP
TPGNGKKGRSKSHWQLKTKPTSMTGVNGEREQLQIVQNASCPVPCSCKLIGSRQGLGVNC
EGKKIESLANLKPKPLTAHELNMRDNNIHAIKKNHLNGYSSLNLLDLGGNNIKLIDNSTF
QNLTELRWLYMDKNYLDTLIADMFIGLQNLEYLSLEYNDIQLILAGTFSPLPNLRVLFLN
NNLLKALPVDAFLGVSLSKISLHNNYFTYLPVAGVLDQLNSIIQIDLHGNPWDCSCNIVP
FKQWTEKLGADVIVSDLKCESPEEFWKRDFRHVRNDLMCPKLYDKIYPTSLSKNSTFTAD
TGTRSNSYVEPNRVSISVLVPGLLLVFVTSAFTVVGMLVFILRNRKRSKRRDGNSSASEI
NSLQTVCDSSYWHSGPYHADGGAQRGFDCSAHFSPTNDA
NT seq
2100 nt
NT seq
+upstream
nt +downstream
nt
atgctgctttggattgtcttgctgaaggcggctctttgtgtggccattggaaatgttaca
agggacatttgtaaggagcagatatgctcctgcaatgagattgaaggcgatttgcacatt
gactgcgaaaaaaggagctttactaatttgcaccatttgactggtcccagttcccagttt
tatcacttgctattgcatgggaattctttatccaggcttttccccaatgagtttgctaac
ttttacaatgccgtaagcttgcatttggaaaacaacggtttgcatgacattgtccctggt
gcttttctgggactgcagctcgtgaaaaggctacacataaataataacaagatacggtca
tttaggaagagcacctttcttggtttagatgacttggaatatcttcaggctgattttaat
ctattgagagacattgacccggccgtgttcagggacttaaataaacttgaagtgttaatt
ctaaatgataacctcatcagtgcactacctataaatgtgtttcaacacgttcccatcacc
catctcgacctgcgagggaaccgaatcaaaacggtgccttatgagggagttctcgaacaa
ataccgggcattgcggaggttttattggaggataacccctgggactgcaactgtgacctg
gtttccctgaaggaatggctggagaatataccgcagaacgcgcttatcggccgggtgatc
tgcgaggctccaacgccactgcaagggaacgacttgaacgagacatcggagatggatctg
tgtccttcaataaaaagtggtgctgacgagagtttagttgcacctcctacccaagaggag
acctctgtacctgggcccgttccaacgccttataaagctagtggtgatcctgggtcccca
actccagggaatgggaaaaagggacgctctaaatcgcactggcagttgaaaacgaagccc
acatctatgacaggtgtgaatggggagagagagcagctgcagattgtgcagaacgcatca
tgccctgtgccatgcagctgcaagctcattggatcccggcaggggttaggggttaactgc
gagggcaagaagatagagagcttggctaacctaaaacccaaacccctcactgcgcacgaa
ttaaacatgagagataacaacatccacgctataaaaaagaaccatctcaatggctattca
agtctgaatctccttgatttgggtggaaacaacatcaaattgatagacaacagcactttt
caaaacctcaccgaattaagatggttgtacatggataagaattacctggatacgctcatt
gcggacatgttcattggacttcaaaatctggaatatctaagtttggaatataatgacata
cagctgatactggcaggcacattcagccctctgcctaatctgcgtgtgcttttcctcaac
aataacttgctgaaagcgctacctgtggatgctttccttggagtgtctttatcaaagatt
agcttgcataataattatttcacatatctccctgtcgcaggggtcttggatcaactcaat
tcgatcatacaaattgatttgcatgggaacccttgggattgctcgtgtaatattgtccct
ttcaaacagtggacggagaaactgggggcagatgtgatcgttagtgatctcaagtgtgag
tccccagaagagttctggaaaagggatttccgtcacgtccgaaatgatctgatgtgtccc
aagctgtatgacaaaatctaccccacctctctctccaaaaacagcactttcaccgcagac
acgggtacgcgctcgaactcctatgtggagccgaacagggtatccatctctgtactagtc
cctgggctactactggtatttgtcacgtctgcgttcactgttgtaggcatgcttgtcttc
atcttgcggaatcgcaagagatcaaagcggagggatggtaattcctctgcgtcagagatt
aattccttgcagacagtgtgcgactcgtcttattggcatagcgggccttaccatgcagac
gggggcgcgcaaagagggtttgactgtagcgcccatttctctccaacaaatgatgcgtaa
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