Oncorhynchus gorbuscha (pink salmon): 124011359
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Entry
124011359 CDS
T07892
Name
(RefSeq) homeobox protein CDX-1-like isoform X1
KO
K09312
homeobox protein CDX1/4
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ogo03000
]
124011359
Transcription factors [BR:
ogo03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: HOXL
124011359
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Caudal_act
Homeodomain
Homeobox_KN
DUF7255
DUF7645
Motif
Other DBs
NCBI-GeneID:
124011359
NCBI-ProteinID:
XP_046180612
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Position
LG23:34774983..34778574
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AA seq
274 aa
AA seq
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MYVGYLLDKEGSMYHQGPVRRSGINIPPQNFVPTPQYSDFTGYHHVPNMDTHTQSSGAWG
APYVAPREDWGAYSLGPPNTIPTPMNNSSPGQVSYCSPEYNPMHAPGSAVLQPPTDNISV
AQLSPDRERRNSSYQWMNKTVQSSSTGEKGKTRTKEKYRVVYTDHQRLELEKEFHFNRYI
TIRRKSELAGNLGLSERQVKIWFQNRRAKERKLIKKKMGSDGSGGSVHSDPGSVSPLPVP
GSLSPSDIHGSLYPPPGMNNLPSIRNIQQVTVTQ
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
atgtatgtgggatacctcttggataaagaaggcagcatgtatcaccaaggacctgtaaga
cgatcgggcatcaacatcccaccacagaactttgttcccacgccacaatattccgacttt
actggataccaccatgtgccaaacatggatactcatacacagtcttcgggggcttgggga
gctccttatgtcgcaccgagggaggactggggcgcctatagtctggggcctcctaacact
attcctacgcccatgaacaactcctcgccgggacaagtttcctattgctcacctgaatac
aatcccatgcacgcgccagggtcagcagtattgcaaccacctacagataatatttctgtt
gctcaactttccccggatagagaaaggcgcaattcttcttaccagtggatgaacaaaacg
gtacaatcatcatctacgggtgagaaaggcaaaacaagaacgaaggagaaatacagagtg
gtttacaccgatcaccagagactggagctggagaaggagttccattttaatcgttacatc
actatccgaagaaagtccgaacttgcggggaatcttggcctttcagaacgacaggtgaag
atctggtttcaaaatcgcagagccaaggagaggaaattaatcaaaaagaaaatggggtct
gatggcagtgggggatcagtgcacagtgacccgggttcagtgagtcctctgcccgtacca
ggctcactcagtccgtcggatattcacggctctctctacccaccccccggaatgaacaac
ttgccatctattaggaacatacagcaagttactgtcactcagtag
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