Oncorhynchus gorbuscha (pink salmon): 124011396
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Entry
124011396 CDS
T07892
Name
(RefSeq) vascular endothelial growth factor receptor 3-like isoform X1
KO
K05097
FMS-like tyrosine kinase 4 [EC:
2.7.10.1
]
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo04010
MAPK signaling pathway
ogo04020
Calcium signaling pathway
ogo04510
Focal adhesion
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
124011396
04020 Calcium signaling pathway
124011396
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
124011396
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
ogo01001
]
124011396
Enzymes [BR:
ogo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
124011396
Protein kinases [BR:
ogo01001
]
Receptor tyrosine kinases (RTK)
VEGFR family [OT]
124011396
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Ig_3
I-set
Pkinase
ig
Ig_2
VEGFR1-3_N_Ig-like
Ig_VEGFR-1-like_5th
V-set
VEGFR-2_TMD
VEGFR-1-like_Ig-like
C2-set_2
Ig_6
C1-set
Herpes_gE
Haspin_kinase
DUF6292
Motif
Other DBs
NCBI-GeneID:
124011396
NCBI-ProteinID:
XP_046180678
LinkDB
All DBs
Position
LG23:297037..517359
Genome browser
AA seq
1432 aa
AA seq
DB search
MKRDLTCFCRIWFGIAASSGLVIGYSMTPPTLDSPKEDLVIHADETLTITCRGQRTLSWV
WPETTLVGEELTDRQAGPWPSRAPGREAKTGSGTPVCTPGAGVVGDHPVAAERTGTPASV
PIQRRGVSILECPGEPGRPYCKTLVLTGAKGDDTGYYRCYYRDVKAVIDGTTAATLYVFV
RDLEQPFLRRNGGSNGDLETIFISRSSTHVTVPCLVTVPDLNVTLYLWETMSMPLEDEGM
VWDSKRGWSIPRQTLDSRPFLFGLYCQAGLQGRVYRSPHYVVHFTGSQLYDVKLYPEDSV
ELIMGEALTLSCNATVEFGMFVEFQWSYPGKQMNSTVGIVHKRNSLSRFTEAVSILTVQS
VNLTDTGTYTCSAITVEKKMDLATQVIVHEKPFITLDYRSSPVVEATSGQKSFKLLAKVS
AYPRPDIQWYKGDKLISRRPEFNRMRLHQHYNLEIRDVHPEDAGNYTVVLKNNAALLERR
LTIILIVNVPPQIHEKEIAAPSSPYRRGSSQTLTCTGYGRPAPNITWQWRRWSPCGLNST
HRMSRRDRKGRSDSVSDCQNWQDLDSQNTVNKIENIETSVEVVDGRQKIVSRLVIQNASV
SVMYKCTANNKVGKDQKLIYFYVTTIPEGFNVELGPSEEPLEQEEVSLSCIADNYTYEQL
TWYRLDPQALQDERGKPLELDCRSVHLYADRLDGQLTYQEQSNSWVLEMTIVSITLQDEG
NYVCEVQNRRSREKHCLRKYISVKALEAPWYRHNPTNQTVNISESLLMECDVMGTPSPHL
SWFKDNQPLHQMSGLQLQDANRTLSIQRVREEDAGLYTCTACNQRGCAHSSAAVTVLGSS
DRANVEIVILIGTGVFAVFFCALLILIFCNVKRVNPADIKTGYLSIIMDPGEVPLDEQFE
YLSYDSSQWEISVDKLRLGKVLGHGAFGKVIEASIFGISKKSSLDTVAVKMLKEGACASD
HKALMSELKILIHIGNHLNVVNLLGACTKPSAPLMVVVEYCKYGNLSNYLRAKREFFLPY
RDRSPKTQSQVRRMIEAGQVEQRARLPPSTSSSSIGSPQSQSSSKSNQKSPSPAVEKMED
LWKTPLTIEDLICYSFQVARGMEFLASRMCIHRDLAARNILLSENNVVKICDFGLARDIY
KDPDYVRKGNARLPLKWMAPESIFDKVYTSQSDVWSFGVLLWEIFSLGASPYPGVQIDED
FCKRLKDGTRMRAPETASPEIYGIMLACWQGEPRERPPFQALVDILGDLLQDDSLPDGKD
YIPLNPSQSSEDDSFSQASSRPASQEEMRLACHSLPIRYYNCVPFAGCVFVGPSKLSSCQ
PRVKTFEELPMETAWYKTHNNGDNQTDSGMVLASEEFDMIQHEHRGANSTERLVVVESSG
SSVSSRHRPAFLSQLSGQTFYNNEYGQLSEEGRVLDFFSSPDDTCCLASSNL
NT seq
4299 nt
NT seq
+upstream
nt +downstream
nt
atgaagagagatttgacgtgtttctgtcggatttggtttgggatcgctgcttcttcaggg
ttggtgattggctattctatgactccgcccacccttgacagccccaaagaagaccttgtg
atccacgcagatgaaacactgaccattacatgcaggggtcagcgtactctgtcctgggtg
tggcctgagacgaccctggtgggagaggagctgactgaccgtcaggccggaccctggccc
agcagagccccaggaagagaggccaagactgggtctggaacccctgtttgtacccccggg
gctggagttgtgggagaccaccccgtggccgcggagcggactggtacgcctgcttcggtc
cctatccagaggaggggagtcagcatcctggagtgtccaggggagcctggaaggccatat
tgcaagaccctggttctcactggagctaaaggggatgatacagggtactaccgctgttac
tacagagatgtcaaggctgtgatcgacgggaccacggctgctactctatatgtgtttgtc
agagatttggagcagcctttcctcaggagaaacggaggaagcaacggggacctggagacc
atcttcatatcaagatcctccactcacgtcacagtaccttgtctggtcactgtgcccgac
ctcaacgtcacactttatctgtgggagacaatgtctatgcccctggaggatgaggggatg
gtgtgggacagtaaaagaggctggtccatcccgagacaaaccttagactccagaccgttc
ctcttcggattgtactgccaagctggactacaggggagagtgtaccgctctccccactac
gtggttcacttcacaggaagtcagctctacgacgtcaagctgtatccagaggactcggtg
gagttgatcatgggggaggccctgacgctcagctgtaatgccacggtggagtttggcatg
tttgtcgagttccagtggtcctatcctggaaaacagatgaacagtacagtgggcatagtg
cacaagcgtaattctctctctcggttcacggaggccgtcagcatcctgaccgtccaaagt
gtcaacctcaccgacaccggcacttacacctgctctgccatcactgtggagaaaaaaatg
gatctggcaactcaagtcatagtgcacgagaaaccattcatcaccctagactacaggagc
agcccagtcgtcgaggcaacatcaggacagaagtcctttaaactgttagccaaggtgtca
gcataccccagacctgacatacagtggtataaaggtgataagttgatcagccgtcgtcca
gagttcaacaggatgcgtctccatcagcactataacttagagatcagagacgttcaccct
gaggatgctgggaactacaccgtcgtcctcaagaacaacgcggccttgctggagaggaga
ctcaccatcattctcattgtcaacgttccccctcagatccatgagaaggaaatagcggca
ccatctagcccatatcgccgtggcagcagccagaccctcacctgtacagggtacggacgt
cccgcccccaatatcacctggcagtggaggagatggagcccctgtggcctcaacagcact
caccgcatgagtcggagggatcgtaaagggcgtagcgacagcgtctcagactgtcagaac
tggcaggacctggactcacagaacaccgttaataaaatagaaaacatcgagacgtcagtc
gaagtggtggacgggaggcagaagatagtcagcagactggtgatccagaacgccagtgta
tcagtcatgtataaatgtactgctaacaacaaagtgggtaaagaccagaagctgatatac
ttctatgtgaccactatcccagaagggttcaatgtagagctgggtccgtctgaggaacct
ctggagcaggaggaggtgtcgctaagctgcatcgctgacaattacacctacgaacagctc
acctggtacagactggacccacaggcgctgcaggatgagcgtggtaaacccctggagctg
gactgtcgtagtgtccacctgtacgctgaccgcctggatggacaactgacctatcaggag
cagtctaacagctgggtcctggagatgactatagttagcatcacgctacaggatgaaggg
aactatgtctgtgaggttcagaataggaggagccgagagaaacactgtctacgcaaatac
atatcggttaaagctctagaagcaccctggtacagacacaacccgaccaatcagacagtg
aacatcagtgagtctctcctgatggagtgtgatgtaatgggaactccttcaccacacctc
tcctggttcaaagacaaccagcccctgcaccaaatgtcaggactgcagctacaggacgcc
aacaggactttgagtatccagcgagtcagagaagaggacgccggtctctacacctgcacc
gcctgtaatcagaggggctgcgcacactcctccgctgccgtcacagtgctgggttccagt
gacagggctaacgtggagatcgtgattctgattgggacaggcgtcttcgctgtgttcttc
tgtgctctactcatcctcatcttctgcaacgtcaaacgggtgaacccagcagacataaag
acaggctatctgtccatcataatggaccccggggaggttcctctggatgagcagtttgaa
tacctctcgtacgactcctcccagtgggagatatctgtggacaaactacgactagggaag
gtgttgggtcatggagcatttgggaaggtcatcgaggcctccatctttggaatcagcaag
aagagcagcctggacactgtggcagtgaagatgttgaaagagggagcgtgtgccagtgac
cacaaggctctgatgtcagagctgaagatcctgatccacattgggaaccatcttaacgtg
gtcaacctcctgggggcatgcaccaaacccagcgcccccctcatggtggtggtggagtac
tgcaagtatgggaacctgtccaactacctgagagccaagagagagttcttcctaccttac
agggaccgctcccctaagactcagagccaggtgagacgcatgatagaggcgggacaagtg
gagcagagagcccgcctcccaccttccacatcctcctcctctattggcagcccccagagt
cagtcatccagcaagtccaatcagaagagcccctctcctgctgtggaaaagatggaagac
ctatggaagactcctctcactatagaagatctgatctgctatagtttccaggtggccaga
ggaatggagttcctggcctcgcgaatgtgtatccacagggaccttgcagcgaggaacatc
ctgctgtctgagaacaacgtggtgaagatctgtgacttcggcctggcgagagacatctac
aaagaccccgactacgtcaggaaaggcaacgcccgtctgccactgaagtggatggctcca
gagagtatctttgacaaggtctacaccagccagtctgacgtctggtcctttggtgttcta
ctctgggagatcttctctctgggtgcatctccgtacccaggtgtccagatcgatgaggac
ttctgtaaacgactgaaagatggaaccaggatgagagctcctgaaacagcatctcctgag
atctatggtataatgctggcctgctggcagggcgagccccgagagagacctcccttccaa
gccctggtagatatcctgggagacctactacaggatgacagcctaccagatggtaaggac
tacatccccctgaatccatcccagagctctgaggacgacagcttctctcaggcctcatca
cgacccgcttcacaggaggagatgagactggcttgtcacagcctgcccatcaggtattat
aactgtgtgcccttcgctggctgtgtgttcgtggggccgtcgaagctgtcgtcatgccaa
cccagagtcaagacgtttgaggagctaccaatggaaacggcctggtataaaacccacaac
aacggagacaaccagacagacagtgggatggttctggcgtcggaggagtttgacatgatc
cagcacgaacacagaggagccaatagtacagagcgcctggtggtggtagagtccagcggt
agctccgttagttccagacaccgaccagccttcctctcccagctctctggccagaccttt
tacaacaacgagtatggtcagctgtcagaggagggcagggtcctggacttcttctcctcc
cctgatgatacatgctgcctcgcatcctccaacctgtga
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