Oncorhynchus gorbuscha (pink salmon): 124011410
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Entry
124011410 CDS
T07892
Name
(RefSeq) CLIP-associating protein 1-like isoform X1
KO
K16578
CLIP-associating protein 1/2
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ogo03036
]
124011410
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ogo04812
]
124011410
Chromosome and associated proteins [BR:
ogo03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
124011410
Cytoskeleton proteins [BR:
ogo04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
CLIP-associating proteins
124011410
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLASP_N
CEP104-like_TOG
HEAT_EF3_N
XMAP215_CLASP_TOG
HEAT
HEAT_EZ
TOR1L1_N
Sec7-like_HUS
Cnd1
Adaptin_N
HEAT_DAAF5
Dopey_N
MMS19_C
ParcG
Paxt-1_C
MMS19_N
KH_DEAH11_1st
ZapG-like
Motif
Other DBs
NCBI-GeneID:
124011410
NCBI-ProteinID:
XP_046180705
LinkDB
All DBs
Position
LG23:complement(55982247..56025477)
Genome browser
AA seq
1604 aa
AA seq
DB search
MEWNMEYCMEQVMQKDLGRRLQVGQDIIDSILDKDKSQVLEQDQTMLDRMVDGVATNWVN
SSNFKVALLGMDILSALVTRLQERFRTQIGTVLPSLIDRLGDSKDQVRDQDQALLQKIMD
QAANPQYVWDRMLGGFKHKNNRTRESVCICLIATLNVYGAQGLTLSKIVPHICNLLGDPT
SQVRDGAMNCLVEIYRHVGERVRMDLGKKGLPQSRLNVIFSKFDEVQRSGNMILSPVSDK
NFEDDDSVDGGRSSSSKGPSSGKKTVSMGSFRRPSSASSTKSTGRDGPSAAAAGAVDEED
FIRAFEEVPAMQLFSNREMEDAMTKIREVLADDKRDWEHRVTALKKMRSLLLAGAVEFDG
FSQQLRLTEAAFKMSSKDLRSQVVREACITLGHLSYILGNRFDHCAESIMPTLLTLVSNS
AKVMATSGIAVIRLIIRHTHYPRLIPIVTGSCQSKSVAVRRRSFEFLDLLLQEWQTSSLE
RNVAVLTETIKKGVHDADSEARSVARKCYWTFHGHFSREAEQLFQALESSYQKALQSHMK
SSDSILSLPASDRSSSSSQESLNRPQSAKSSMGNTATRTKAASSRGPTTPGSLQRSRSDV
DVNAAATACAKTRMTPVPSSPAPFSAASALPPGSYASLGRVRTRRTSSGSGVGASPSVTD
SRGRSRAKMVSVSQPGSRSGSPGRLLSHTYGRIPRATGATTPADRRPKVPRSHGCSRDTS
PDRSGLARSRIPRPSMSQGCSRDTSRESSRDTSPARGFSPLASRRVSRSTSALHSAESVG
HSERLGLAHQARISASVNAMRILNTGTEVEAAVADALLLGDARNNKRRPVRRRYESPGIY
SDDDANSDASSACSERSYGSRNGGAPHYMRQTEDVAEVLNHCASSNWSERKEGLLGLQNL
LVSQRILSRVELKRLCEIFTRMFADPHSKRVFSMFLETLVDFITLHREDLQDWLFVLLTQ
LLKKMGADLLGSVQAKVQKALDVTRDSFPFDQQFNILMRFIVDQTQTPNLKVKVAILRYI
ECLARQMDPADFVNSSETRLAVSRIITWTTEPKSSDVRKSFHHSWAGEELSGRPSTTVAS
LPGEGNVEERCKQAAQVVLIALFELNTPEFTMLLGALPKTFQDGATKLLHSHLRNSSNTG
VASPSSTMGRTPPPPRHPSSRSSPLTSPTNCSRGGALSPSRLWGWSADGLSKYPPPFPSP
LSSTPAAPSLKTLRSAYSPSMLEYDTENLNTDQIYSSLRGVTEAIQNFSFRSQEDLMEPS
RGKREDTPGVGTASHITGADVVEGPGGRTALDNKTSLLNTPSPRSFSGPRGRDYNPYNYT
DTISAYDKAALKETVYEDDVEQLRDGRQECGGENKMLHTKNSSPAEQLELAGELLKELSN
PSERPEERRGALVELLKIAREDSLAVWEEHFKTMLLLLLETLSDQDHTIRALALRVLKEI
LRNQPARFKNYAELTIMKTLEAHKDSHKEVVRAAEESASTLAGSIHPEQCIKVLCPIVQT
ADYPINLASIKMQTKVIERITKESLHQLLPDIIPGLLQGYDNTESSVRKASVFCLVAVYS
VIGEELKPYLAQLTGSKMKLLNLYIKRAQTSTSNSSSSSDISSY
NT seq
4815 nt
NT seq
+upstream
nt +downstream
nt
atggagtggaatatggagtactgtatggagcaggttatgcagaaggacctgggtaggaga
ctacaggtgggccaggacatcatagactccatcctggacaaggacaagtcccaggtcctg
gagcaggaccagaccatgctggacagaatggtggatggtgtcgctaccaactgggtcaac
tccagcaatttcaaggtggctttgttgggaatggacatactctcagctttagtaacaaga
ctacaggaacggtttaggacacagattggaactgttttgccgagtttgatagatcgacta
ggcgactcaaaggaccaagtcagagatcaggaccaagctcttctacaaaagatcatggat
caagctgccaacccacagtatgtatgggaccgaatgttaggaggattcaaacacaagaac
aacaggacccgggagagtgtctgcatttgccttatcgccacgttaaatgtatatggagct
caaggattgaccctcagcaaaattgtcccccacatatgtaatcttttaggagaccctaca
agccaggtgcgagacggggccatgaactgtcttgttgaaatctaccgacacgtcggggag
cgggtgcggatggacctggggaaaaagggactgccacagtcacggttgaatgtcattttc
agtaaatttgatgaagttcaaagatcggggaacatgatcctgtcccctgtctcagataag
aactttgaagatgatgattcagtggacggggggcggtcctcctcttctaagggcccgtcg
tcagggaagaagacagtgagcatggggtcgttccgtaggcccagctctgcttccagcacc
aaatcaacagggagagatggtcctagtgcggctgctgcaggggctgtggatgaggaggac
ttcatccgtgccttcgaggaagtgcccgctatgcaacttttctctaacagggaaatggag
gacgccatgaccaagatcagagaggtgctggctgacgacaaacgagactgggagcacaga
gtcactgcgttgaagaagatgcgttctctgctcctggcgggggcggtggagtttgacggt
ttctcccagcagctgcgtctcacggaggcagccttcaagatgtcctctaaagacctgcgc
tctcaggtggtcagagaggcctgtatcactctgggccacctgtcctacatcctggggaac
aggtttgatcattgtgctgagtccatcatgcccactctcctaaccctggtctctaactcg
gccaaggtcatggccacatccggaatcgctgtcatacgactcatcatcagacatacacac
taccctcgtctcattcctatcgtgactggcagctgccagtccaaatctgtggccgtgaga
aggcgcagttttgagttcttggacctcttgctacaggagtggcagaccagctctctagag
aggaatgtagctgttctgacagagaccatcaagaaaggagtccatgatgcagactccgag
gccagatcagtggccaggaagtgctactggacgttccacggccacttcagccgggaggcg
gagcagctgttccaggctctagagtcgtcctatcagaaggctctccagtcccacatgaag
agttctgatagcatcttgtccctccctgcctcagaccgctcctcctcctcctcacaggag
agcctcaaccgccctcagtctgccaagagctccatgggaaacaccgcgaccaggacgaaa
gcggcttcctccagaggtcccaccaccccgggctctctacagcgttcccgtagcgacgtg
gacgtgaacgctgccgccaccgcttgtgccaagaccaggatgactcccgtgccctcctcg
ccggcccccttcagcgctgcctccgctctgccacccggctcctacgcctctcttggccgt
gtgcgtaccaggagaacgagttcggggagcggcgtgggggcgagtccctctgtcacagac
agtagggggagaagtcgagccaaaatggtgtcagtgtctcaacctggcagtcggtctggc
tcccctggtcgtctcctgagccacacatacggcaggatccccagggcaactggagcgaca
acgccagcagacaggaggcctaaagtcccccgcagtcatggctgcagccgagacaccagt
ccagacagatcaggcctggcgaggagtcgtatcccccggcccagcatgagtcagggctgc
agcagggacacctctagggagagcagccgggacaccagccccgctcggggattctctcct
ctggcgtccagacgtgtctcccgctccaccagtgctctccactcggctgagtctgtgggc
cactcagagcgtctaggtctggcccaccaggcccgtatctcggcctctgtcaacgccatg
aggatcctcaacaccgggaccgaggtggaggcagctgtagccgacgccctgttactagga
gacgccaggaacaacaagcggcggccagtcaggcggcggtacgagtccccgggcatctac
tcagacgacgacgctaacagcgacgccagcagcgcctgctctgagcgctcgtatggctcg
cggaacggcggcgcgccccactacatgagacagacggaggacgtggccgaggtgctgaac
cactgtgccagttccaactggtctgagaggaaggaggggctgctgggactacagaacctg
ctcgttagccagagaattctcagtcgtgtggagctgaagcggttgtgtgagatcttcact
aggatgtttgctgacccacacagtaagcgagtgttcagcatgtttctggagaccctggta
gacttcatcaccctgcacagagaggacctgcaggactggctgtttgtcctgctcacccag
ctgctgaagaagatgggagctgacctcctgggttctgtacaggccaaggtccagaaggct
ctggacgtcaccagggactcgttcccgttcgaccagcagtttaacatcctgatgcgtttc
atcgtggaccagacccagacccccaacctgaaggtcaaggtggccatcctgaggtacatt
gagtgcctggcccgtcaaatggaccccgcagactttgtcaactccagcgagacgcgcctg
gccgtctcccgcatcatcacctggaccacggaaccaaagagctccgacgtccggaagagc
ttccaccatagctgggcaggtgaggagttgtcaggcaggcccagcaccaccgtagcctct
ctacctggagaggggaacgtggaggagaggtgcaagcaggcggcccaggtggttctgatc
gccttgtttgagctgaacaccccagagttcaccatgctgctgggggccctgcccaagacc
ttccaggacggagccactaaactgctgcatagccacctgcggaactccagcaacaccgga
gtggcttctcccagtagcaccatgggacggactcctcccccgcctcgccaccccagcagt
cgcagcagccccctcacctctcccaccaactgctcccgtgggggcgcgctctctcccagt
cggctatggggttggagtgccgatggcctgtcaaagtacccccctcccttcccttctcct
ctctcctccacccctgctgccccctccctgaagaccctacgaagtgcttactctcccagc
atgttggagtacgacacagagaacctgaacaccgatcagatttatagctccctgcgaggc
gtcactgaggccatccagaacttcagcttccgcagtcaggaggacctcatggagccgagc
agaggcaagagagaggacacgccgggtgttggaacagcatcacacatcactggtgccgac
gtggtggaggggcccgggggtcgcacggccctggacaacaagacctccctactcaacacc
ccctccccgcgttccttctccgggccccggggccgcgactacaacccctacaactacaca
gacactatcagcgcctacgacaaggctgccctgaaagagacggtgtacgaggacgacgtg
gagcagcttcgagatggccgccaagagtgtggtggagaaaacaagatgctgcacaccaag
aacagttcccctgcggagcagctggaactggcgggtgagctgctgaaggagctgtctaac
cccagtgagaggccagaggagaggagaggagccctggtggagctgctgaagatagcccgg
gaggacagcctggcagtgtgggaggaacacttcaaaaccatgctgctcctgctgctggag
accctgtcagaccaagatcacaccatccgggccctggcactacgagtgctgaaggaaatc
ttacgtaaccagccagcccgcttcaagaactatgcagagctcaccatcatgaagactctg
gaggcacacaaagactcccacaaagaggttgtgcgggcagcagaggagtcagcctccacc
ctggccggctccatccacccagagcagtgtatcaaggtgctgtgtcccatcgttcagaca
gctgactaccccatcaacctggcttccatcaagatgcagaccaaggtgatcgaacgcatc
accaaggagtccctgcaccagctgctgcctgacatcataccaggactactgcaggggtat
gacaacacagagagcagtgtgaggaaggccagtgtgttctgtctggttgctgtctactct
gtcatcggtgaagagctgaagccctacctggcccagctaacaggaagcaagatgaagctg
ctgaacttgtacataaagagagcccagacgtccaccagcaacagcagcagctcttcagac
atctcctcatactaa
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integrated database retrieval system
