Oncorhynchus gorbuscha (pink salmon): 124011476
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Entry
124011476 CDS
T07892
Name
(RefSeq) transcription factor COE1-A-like isoform X1
KO
K09103
early B-cell factor
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ogo03000
]
124011476
Transcription factors [BR:
ogo03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
124011476
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GFIT
Motif
Pfam:
COE1_DBD
COE1_HLH
TIG
HLH
Motif
Other DBs
NCBI-GeneID:
124011476
NCBI-ProteinID:
XP_046180861
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All DBs
Position
LG23:complement(15071911..15199953)
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AA seq
599 aa
AA seq
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MFGIQENIQRSGSIMKEEPMVAGMNAVRSWMQGAGLLDVSTAAQSGVALARAHFEKQPPS
NLRKSNFFHFVLALYDRQGQPVEIERTSFVGFVEKEKETPGEKTNNGIQYRLQLLYSNGI
RTEQDFYVRLIDSMTKQAIIYEGQDKNPEMCRVLLTHEIMCSRCCDKKSCGNRNETPSDP
VIIDRFFLKFFLKCNQNCLKNAGNPRDMRRFQVVVSTTVSVDGHVLSVSDNMFVHNNSKH
GRRARRQDPSEGTPSYLEHATPSIKAISPSEGWTTGGATVIIIGENFFDGLQVIFGTMLV
WSELITAHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGTPGRFIYTALNEPTIDYGFQRLQ
KVIPRHPGDQERLPKEVILKRAADLVEALYGMPHNNQEMILKRAADMAEALYTTLPRSHN
QLTGMGSGSVHAGMMGVNSFPGSEVTQIANQGYSRSSSSASPHGYVPSTTPQQTSYSSVS
TSMNGYTNSGMTTLGTSPNFLNGSATNSPYAIVPSSPTMASTTNLSSNCSSSSGIFSFSP
ANMVSAAVKQKSAFAPVVRPQTSPPLTCTSAIANGLQDQSFVDSSKYSSSSSLQGLAFS
NT seq
1800 nt
NT seq
+upstream
nt +downstream
nt
atgtttgggatccaggagaacatccagaggagcggaagtattatgaaagaagagcccatg
gtggccgggatgaacgctgttcggagctggatgcagggcgccgggctgctggacgtcagc
acagccgcccagagcggcgtggctctggcccgggcacatttcgagaagcaaccgccctcc
aacctccgcaagtccaacttcttccactttgtgctggctctgtacgacagacaaggccag
ccggtggagatcgagagaaccagcttcgttggatttgttgaaaaggaaaaagaaacgcca
ggggaaaaaaccaacaatgggatacagtacaggttacagctcctatacagcaatggtatc
aggacagaacaggacttttacgtgcgcctcatcgattccatgaccaaacaggcgatcatc
tatgagggacaggataagaaccctgagatgtgccgggttctactgactcacgagattatg
tgcagtcggtgttgtgataagaagagctgtggcaacagaaacgagacgccctctgacccc
gtcatcattgacaggttcttcctcaagttcttcctgaaatgcaaccagaactgtctgaaa
aatgcagggaacccacgagacatgagacgctttcaggtggtggtgtctaccacggtgagt
gtggacggacatgtcctctctgtgtctgacaacatgtttgtccacaacaactctaaacac
ggtcgccgggccaggagacaagacccttcagaaggaacaccctcgtacctggagcatgcc
accccttctatcaaggccatcagccccagtgagggctggactacaggcggggcgacagtc
attatcattggagaaaacttctttgatggacttcaggtcatatttggtaccatgctggtc
tggagtgagctcatcacagcccacgccatccgggtgcagactcccccaagacacatccct
ggggttgtagaggtcactctgtcatacaagtctaaacagttctgcaagggcacacctgga
cgcttcatatacacagcgttgaatgagcccactatagattacggcttccagaggctgcag
aaggtcatccccagacatccaggagaccaggagagactacctaaggaagtcattctaaag
agagcggcagacttggtagaagcgctgtacgggatgccacacaacaaccaggagatgatt
ctgaagcgggcagcagacatggcagaggcgttgtacacaacgttgccacgcagccacaac
cagctgactgggatgggcagcggctccgtccacgccggcatgatgggcgtcaactccttc
cccgggtcagaggtcacacagatagccaatcagggttacagtaggagtagcagcagtgca
tctcctcatggttatgtccccagcaccactccacagcagaccagctacagctctgtttcc
actagcatgaacggctacactaattctggaatgaccacactaggcacctcacccaacttc
ctcaacgggtcagccaccaactcaccctatgctatcgttccctccagtcccaccatggcc
tccaccaccaatctttcatccaactgcagtagttcttcaggcatcttctccttctctccg
gccaacatggtgtctgctgcggtcaaacagaagagtgccttcgcccccgttgtacggccg
cagacctcccctccactcacctgcaccagcgctattgctaacggactgcaagatcagtct
tttgtggactctagcaagtactcctcctccagctctcttcagggtctggccttctcctga
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