KEGG   Oncorhynchus gorbuscha (pink salmon): 124011542
Entry
124011542         CDS       T07892                                 
Name
(RefSeq) protocadherin beta-16-like
  KO
K16494  protocadherin beta
Organism
ogo  Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:ogo00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:ogo04515]
    124011542
Cell adhesion molecules [BR:ogo04515]
 Cadherins
  Protocadherins
   124011542
SSDB
Motif
Pfam: Cadherin Cadherin_2 Cadherin_C_2 7TM_GPCR_Sri Peptidase_S55
Other DBs
NCBI-GeneID: 124011542
NCBI-ProteinID: XP_046180958
LinkDB
Position
LG23:complement(30702497..30705115)
AA seq 810 aa
MGDWCTTGRRGGWRVLFYILCLSALDSVTGQARYSIPEEQSEGSIVGNIGRDLGLEVKRL
VSGKARIIPKGARQYVDLNRDKGLLVVKERIDREELCGQTTPCSFSFELIIENPIQLYRV
TVEVGDINDNTPSFPKDEINLEISENAVSGARFSLESAVDPDVGVNSIQNYSLRPTDNFK
LEVHSQADGGKYIEMVLQTPLDREELETLSLMLIATDGGEPQRTGTVRIHITVLDANDNA
PVCGQPVYKTDVKESSPKGTLITTVSADDADQGVNGEVTFSIAHVAKEAKELFELNVDTG
EIKLVGNLDFEKTKNYQLNVKARDHGGFTDTCKVVIQIIDENDNVPTIQLMSHSNSIPED
SPPGTTVAVINVEDADSDGNGVVLCYINADIPFKIESSLTDYYTIVTDSTLDRETVSEYN
VTITVSDEGTPPLSSNKNITVKVSDVNDNPPKFDQPVYSKSIQENNSPGFSIFSVRASDA
DWGQNARVSYFLYDKQVNGVTASSFVSVNSENGAIHAVRSFDYEQIKSFQFNVTARDGGS
PPLSSVVAVRILVQDQNDNAPQVLYPVQTSSSLVAEMVPRSADVGYLVTKVVAVDVDSGQ
NAWLSYKLQKATDRALFEVGLQNGEIRTIRQVNDKDAAKQRLTVVVEDNGQPSRSATVNV
NVAVADSFPEVLSEFTDFTHDKEYNDNLTFYLVLALAVVSFLFITCLVVIISVKIYRWRQ
SRVLYHSSLPVIPYYPPRYADTLGTGTLQHVYNYEVCRTTDSRKSDCTFVRPCSKNVVIM
DPSSTGTMQRMQSEQNILDEPDSPLEVSLL
NT seq 2433 nt   +upstreamnt  +downstreamnt
atgggtgattggtgtacgacaggacgcagaggcgggtggcgagtactgttttacattctt
tgtctgagtgccctagattctgtaactgggcaggcacgatattccataccagaggagcag
tcagaggggtcgatcgttggaaacattggtagagatttgggtttggaggtgaagagactc
gtgtccggtaaagctcgcattataccaaaaggagcacgacaatatgtagatctgaaccga
gacaaagggctcctcgttgttaaagagagaatcgaccgagaggagctctgtggacagact
acgccttgtagcttcagctttgagcttatcatagaaaaccccattcagttatatcgagtt
acagtagaggtcggtgacattaacgataacaccccgtcctttccaaaggatgaaatcaat
ttggaaatcagcgaaaatgccgtctccggggcgcgcttttctctggagagcgccgttgac
cctgacgttggtgttaacagtatacagaattattctctaagaccgacagataatttcaaa
ttagaggtacacagccaagccgatggtggtaaatatattgagatggttttgcaaaccccc
ctagacagagaggaactggagactctgtctctgatgcttattgctactgacggaggcgag
cctcagaggactggaactgtccgcatccatattaccgtgctggatgccaatgataatgcg
ccagtatgtggtcaacccgtttataaaacagacgttaaggagagctccccaaaagggact
ttgataaccaccgttagcgcagacgatgcagaccaaggggtgaatggagaggtcactttc
tccatcgctcatgttgctaaagaggcgaaggagctgtttgagcttaatgtggatacaggg
gaaatcaaattggtaggaaacctggattttgaaaagacaaaaaactatcaattaaacgtg
aaagcgagggaccacggagggtttacggatacttgtaaagttgtcattcaaattattgat
gagaacgataatgtccccacaatacaactcatgtcacattctaactcgattcccgaggac
tctccccctggtaccactgtagctgttattaatgttgaggacgcagactcagacggcaac
ggtgtcgttctttgctatattaacgcagatattccgttcaaaatagagtcatcgttaacc
gattattatacaatagtcactgatagcacattggatagagaaaccgtgtctgagtacaac
gtcaccattacagtttcagatgaagggactccgcctctctccagcaataagaacataact
gttaaagtatcagatgtgaatgataacccacccaagtttgatcaacctgtatatagtaag
tctattcaggaaaacaattcgccagggttttctatattctcagtgagagcgagtgatgct
gactggggtcaaaatgcccgcgtctcctactttctctatgataaacaagttaacggggtg
actgcttcctcgttcgtctcagtaaattcagaaaatggcgccatccatgctgttaggtca
ttcgattatgaacaaatcaagtcgtttcaattcaacgtcactgcccgtgatggagggtct
ccacctctcagttcagtggtcgctgttagaatattagtccaggaccagaatgacaacgcg
cctcaggttctgtatccagtccagactagcagctctctggtggctgaaatggtgcctcgt
tcagcagatgtgggatatcttgtcactaaagtggtggctgttgatgtggactctggacag
aatgcctggctctcgtataaactgcagaaagcgacagacagggcgctgtttgaagtgggt
ttacagaatggagaaataagaactatacgccaagtcaatgataaagatgctgcgaaacaa
aggctcactgttgtagtggaggacaacgggcagccctctcgttcagctacagtcaatgtt
aacgtggcggtggcggacagcttccctgaagtgctctcggagttcactgactttacgcac
gacaaggagtacaatgacaacctgactttttacttagtcttggctttggctgtagtctca
tttctgttcatcacatgtttagtggttattatatcagtgaaaatatacagatggagacag
tctcgcgtcctctatcattccagtctcccggttattccgtattatccaccgcgttacgca
gacaccttggggacaggaactctacagcacgtgtacaattacgaggtgtgcaggacgact
gactccagaaagagtgactgtacgttcgtcagaccctgtagtaagaacgtagtgataatg
gaccccagttctacagggacgatgcagcggatgcagagtgaacagaacatcctggatgaa
ccagactctccactagaggtgagtttgttgtag

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