Oncorhynchus gorbuscha (pink salmon): 124011542
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Entry
124011542 CDS
T07892
Name
(RefSeq) protocadherin beta-16-like
KO
K16494
protocadherin beta
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ogo04515
]
124011542
Cell adhesion molecules [BR:
ogo04515
]
Cadherins
Protocadherins
124011542
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
7TM_GPCR_Sri
Peptidase_S55
Motif
Other DBs
NCBI-GeneID:
124011542
NCBI-ProteinID:
XP_046180958
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Position
LG23:complement(30702497..30705115)
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AA seq
810 aa
AA seq
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MGDWCTTGRRGGWRVLFYILCLSALDSVTGQARYSIPEEQSEGSIVGNIGRDLGLEVKRL
VSGKARIIPKGARQYVDLNRDKGLLVVKERIDREELCGQTTPCSFSFELIIENPIQLYRV
TVEVGDINDNTPSFPKDEINLEISENAVSGARFSLESAVDPDVGVNSIQNYSLRPTDNFK
LEVHSQADGGKYIEMVLQTPLDREELETLSLMLIATDGGEPQRTGTVRIHITVLDANDNA
PVCGQPVYKTDVKESSPKGTLITTVSADDADQGVNGEVTFSIAHVAKEAKELFELNVDTG
EIKLVGNLDFEKTKNYQLNVKARDHGGFTDTCKVVIQIIDENDNVPTIQLMSHSNSIPED
SPPGTTVAVINVEDADSDGNGVVLCYINADIPFKIESSLTDYYTIVTDSTLDRETVSEYN
VTITVSDEGTPPLSSNKNITVKVSDVNDNPPKFDQPVYSKSIQENNSPGFSIFSVRASDA
DWGQNARVSYFLYDKQVNGVTASSFVSVNSENGAIHAVRSFDYEQIKSFQFNVTARDGGS
PPLSSVVAVRILVQDQNDNAPQVLYPVQTSSSLVAEMVPRSADVGYLVTKVVAVDVDSGQ
NAWLSYKLQKATDRALFEVGLQNGEIRTIRQVNDKDAAKQRLTVVVEDNGQPSRSATVNV
NVAVADSFPEVLSEFTDFTHDKEYNDNLTFYLVLALAVVSFLFITCLVVIISVKIYRWRQ
SRVLYHSSLPVIPYYPPRYADTLGTGTLQHVYNYEVCRTTDSRKSDCTFVRPCSKNVVIM
DPSSTGTMQRMQSEQNILDEPDSPLEVSLL
NT seq
2433 nt
NT seq
+upstream
nt +downstream
nt
atgggtgattggtgtacgacaggacgcagaggcgggtggcgagtactgttttacattctt
tgtctgagtgccctagattctgtaactgggcaggcacgatattccataccagaggagcag
tcagaggggtcgatcgttggaaacattggtagagatttgggtttggaggtgaagagactc
gtgtccggtaaagctcgcattataccaaaaggagcacgacaatatgtagatctgaaccga
gacaaagggctcctcgttgttaaagagagaatcgaccgagaggagctctgtggacagact
acgccttgtagcttcagctttgagcttatcatagaaaaccccattcagttatatcgagtt
acagtagaggtcggtgacattaacgataacaccccgtcctttccaaaggatgaaatcaat
ttggaaatcagcgaaaatgccgtctccggggcgcgcttttctctggagagcgccgttgac
cctgacgttggtgttaacagtatacagaattattctctaagaccgacagataatttcaaa
ttagaggtacacagccaagccgatggtggtaaatatattgagatggttttgcaaaccccc
ctagacagagaggaactggagactctgtctctgatgcttattgctactgacggaggcgag
cctcagaggactggaactgtccgcatccatattaccgtgctggatgccaatgataatgcg
ccagtatgtggtcaacccgtttataaaacagacgttaaggagagctccccaaaagggact
ttgataaccaccgttagcgcagacgatgcagaccaaggggtgaatggagaggtcactttc
tccatcgctcatgttgctaaagaggcgaaggagctgtttgagcttaatgtggatacaggg
gaaatcaaattggtaggaaacctggattttgaaaagacaaaaaactatcaattaaacgtg
aaagcgagggaccacggagggtttacggatacttgtaaagttgtcattcaaattattgat
gagaacgataatgtccccacaatacaactcatgtcacattctaactcgattcccgaggac
tctccccctggtaccactgtagctgttattaatgttgaggacgcagactcagacggcaac
ggtgtcgttctttgctatattaacgcagatattccgttcaaaatagagtcatcgttaacc
gattattatacaatagtcactgatagcacattggatagagaaaccgtgtctgagtacaac
gtcaccattacagtttcagatgaagggactccgcctctctccagcaataagaacataact
gttaaagtatcagatgtgaatgataacccacccaagtttgatcaacctgtatatagtaag
tctattcaggaaaacaattcgccagggttttctatattctcagtgagagcgagtgatgct
gactggggtcaaaatgcccgcgtctcctactttctctatgataaacaagttaacggggtg
actgcttcctcgttcgtctcagtaaattcagaaaatggcgccatccatgctgttaggtca
ttcgattatgaacaaatcaagtcgtttcaattcaacgtcactgcccgtgatggagggtct
ccacctctcagttcagtggtcgctgttagaatattagtccaggaccagaatgacaacgcg
cctcaggttctgtatccagtccagactagcagctctctggtggctgaaatggtgcctcgt
tcagcagatgtgggatatcttgtcactaaagtggtggctgttgatgtggactctggacag
aatgcctggctctcgtataaactgcagaaagcgacagacagggcgctgtttgaagtgggt
ttacagaatggagaaataagaactatacgccaagtcaatgataaagatgctgcgaaacaa
aggctcactgttgtagtggaggacaacgggcagccctctcgttcagctacagtcaatgtt
aacgtggcggtggcggacagcttccctgaagtgctctcggagttcactgactttacgcac
gacaaggagtacaatgacaacctgactttttacttagtcttggctttggctgtagtctca
tttctgttcatcacatgtttagtggttattatatcagtgaaaatatacagatggagacag
tctcgcgtcctctatcattccagtctcccggttattccgtattatccaccgcgttacgca
gacaccttggggacaggaactctacagcacgtgtacaattacgaggtgtgcaggacgact
gactccagaaagagtgactgtacgttcgtcagaccctgtagtaagaacgtagtgataatg
gaccccagttctacagggacgatgcagcggatgcagagtgaacagaacatcctggatgaa
ccagactctccactagaggtgagtttgttgtag
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