Oncorhynchus gorbuscha (pink salmon): 124011565
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Entry
124011565 CDS
T07892
Name
(RefSeq) LOW QUALITY PROTEIN: transcriptional regulator ATRX-like
KO
K10779
transcriptional regulator ATRX
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
124011565
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ogo03000
]
124011565
03036 Chromosome and associated proteins [BR:
ogo03036
]
124011565
Transcription factors [BR:
ogo03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
124011565
Chromosome and associated proteins [BR:
ogo03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
124011565
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
ADD_ATRX
Helicase_C
Motif
Other DBs
NCBI-GeneID:
124011565
NCBI-ProteinID:
XP_046180978
LinkDB
All DBs
Position
LG23:798342..894849
Genome browser
AA seq
2220 aa
AA seq
DB search
MSRTSAESTDQMMEQEVDHLPITDQKEEEEPGSSAETERPSSSHTKRKPAVTAKHTGGNE
SDTSDESGQEDGASDNPSDGVLVVRPGTDNKESRGAMKLDLSRKNTDNTLEERIDCTACG
QQVNHFQRHSVFEHPMLHVLLCKSCYKYYTSDDINKDEDGMDEQCRWCAEGGNLICCDYC
HNAFCKKCILRNLGRKELSMITDKDSKWSCYICSPQPLSDIASNCSNILAQLESFWRTGC
KKERKEVKGHSKGKGHHHHGKAVVNGKEHSDGSGTLTFSYKTLKVPKELVKRTKKLIETT
TGLNNTFIHFIQQAEEEQGAGGGGSGTRHLNAFRSVLADLKKAHAALEEDLESQFTSQDQ
GMQNGDAVSNTDGHDGHDQIDNMVEDGQEAEEDKMADTEDGEELEEDGGLSEDAEMEGSP
APAPQDHSDTETDSQAKDQTAVEEEEDEEEEEEEEEGERDKDIVSVGPAVPDELFQMVES
LADSTGLTPGNNAMETTAASQSESPAADSNRKSLETHKEKAMPKVKNLIVKLTPVPVVTT
RTSRSMSKDGGKERSKDGGKERSKDGGKERSKDGGKERSKERSKDGGKQRSKDGGKDKSK
DGGKDKSKDGGKDRSKDGGKDKSKDGGKDKSKDGGKDKSKDGGKDKSKDGGKDKSKDGGK
DKSKDGGKDKSKDGGKEKSKDGGKEKSKEEVEEGGGSEEDSRRSSRTKTTPLRKSPDGKN
KMAESSPENSDSEGKSPSRLKSRAKGSSEKEHEEEEEQQQSNASPKVTADPSKQEVDSDS
DEVLDILLQTAAAEHSSDEDAQQDADGNQGNSSFKRCLFKLSKKDGEEEENDKVKTDKKL
AAKRKLKADDSDNSESDSDEDAKKKKKKKSSSASAKKTSKKKGSDGSSDSDLEMEGLSKL
ATGKRRSSRVKKEREEKENKGGDRRRSYELKRKARSRGAKQQDSSSDDDEEEGGGSGEES
GDQQKIKPDDDEEEGGGSGEESGDQQKIKPIVEETVLAGRGTFHQSSGDEGNHDASQMAD
EEDDDDEPENRIAKKMLLAQIKANYSSGAEESSDEDGEENEQKKGKGGEEQEEDDDDDDE
GGSGSDVDMKTSVGRRHRLLRHKLTLYEVESGEEKEKPASKGKKETKRTRRKVGSDDSAD
SDFKESASSSESGVSEEISEKESSSEEESESEKEGSSQKRTTRSSKKKKKKKKKEERSYA
QKKKRRRIKTQDSSSEDKSGSGEDGSAKEDGDTPKGQRKKIRKILKDDKLRMETRDALKE
EEERRRRIAEREQLREKLREVLVVEEASAVACPITTKLVLDEDEETKEPMVQVHRNLVTK
LKPHQVDGVQFMWDCCCESVKKTNKNSGSGCILAHCMGLGKTLQVVTLLHTLLLCEKLDF
STALIVCPLNTVLNWLNEFEKWLWLQGRCLCVTELATVKRPQERASALQQWQEDGGIMII
GYEMYRNLTQGRNIKSKKLKETFQKTLVDPGPDFVICDEGHILKNEVSAISKAMNSIKTR
RRVVLTGTPLQNNLIEYHCMVNFIKENLLGSVKEFRNRFVNPIQNGQAADSTDQDVRIMK
KRAHILYEMLNGCVQRRDYSALTKFLPPKHEYVVCVRVTPIQCTLYRHYLEHLTGTGNVV
EXGSGRAGTKLFQDFQMLSRIWTHPWCLQLDYISKENKVYTDEDSMESFIPLETEESSLS
MTSEDIEKQKKKKKRGKARKKDSDSDSDALEVIKEWNTSSRGGDPSSRNRAEPQEEVRPA
SSPGTRSPDWHKEFVTEADSEILEHSGKMVLLFEILRMAEEVEDKILVFSQSLISLDLIE
DFLELSGRAKEEEKPSPYKGEGKWFRNIDYYRLDGSTNALNRKKWAEEFNDTSNVRGRLF
LISTRAGSLGINLIGANRVIIFDASWNPSYDIQSIFRLYRFGQLKTCYVYRFLAQGTMEE
KIYDRQVAKQSLSFRVVDQQQIERHFTMNELTELYAFEPDLLDDPTGKKSKRTTPMLPKD
PFLAELLHSNKEQIVGYHEHDSLLDHKEEEALSEEDRKAAWAEYEAEKKGLSLRVNHGAY
GGQMDMGGANSYFPFNIAALASMSNPQLEELINQGRQKVMEATNALKFLPRESLEDTIGR
VWKENPALTESQVQAMALGRQASVEMELKHREAVYRDVLNKQQTLMMYVQKVITNRKVRE
QQMAMANQAQLMSQMNGMLGAGGMSQMELLGLYQQLGALQGHPTHPSMGGKNPGPSKGNL
NT seq
6663 nt
NT seq
+upstream
nt +downstream
nt
atgagtagaacctcagctgaatctacagaccaaatgatggagcaggaagtagatcatctt
ccgattacagaccagaaggaggaggaggagcctgggagctcagcagagactgagagaccc
tcctcttctcacaccaagaggaagcctgctgttacagccaagcacaccggagggaatgag
tctgacacctcggacgagagtggacaggaagatggcgcctctgacaacccctcagatggc
gtgttggtggtacggcctgggactgacaacaaggagagcagaggagccatgaagctggac
ctctcaaggaaaaacacagataacactttggaggagaggatagactgcaccgcctgtgga
cagcaggtcaaccacttccagcgccactcagtgtttgagcacccgatgctccatgtgctc
ctctgcaagtcgtgttataagtattacaccagcgatgacatcaataaagacgaggacggc
atggacgaacagtgcaggtggtgtgctgaaggtggcaacctgatctgctgtgactactgc
cacaacgccttctgtaagaagtgcatcctgcgtaacctggggcgcaaggagctgtctatg
atcaccgacaaggacagtaaatggtcctgctatatctgcagccctcagcctctgtcagac
atcgcctccaactgctccaacatcttggcccagctggagagcttctggcgcacgggatgc
aagaaagagaggaaggaggtgaaagggcacagtaagggtaaaggtcaccaccaccatggt
aaagctgtggtgaacggtaaggaacattcagacgggtcagggaccctcaccttctcctat
aagaccctgaaggtccccaaggagctggtgaagaggaccaagaagctgattgagacgacc
acagggctcaacaacaccttcatccatttcatccagcaggctgaggaggagcagggagca
ggaggaggtggcagcgggaccagacacctcaatgccttcaggtctgttctggctgatctg
aagaaggcccatgctgccctagaggaggacttggagtcacagttcacttcccaggaccag
gggatgcagaacggggatgctgtttccaacaccgacggccacgacggccacgatcagatt
gacaacatggttgaggatggacaggaggcagaagaggataaaatggccgacactgaggac
ggggaggagctagaggaggatgggggcttgtcagaggacgcagagatggaggggagcccc
gcccccgcgcctcaggaccactcggacacagagacagatagccaggccaaagaccagaca
gcagtggaggaggaggaggatgaagaagaagaagaggaggaggaggagggtgaacgggat
aaagacattgtgtccgtcgggccggccgtccctgacgagctcttccaaatggtagagagt
ctggcggactcgacagggttaacgcccggcaacaacgccatggaaaccaccgctgctagc
caatccgagagccccgccgccgactcaaacaggaagtcacttgaaacccataaggagaag
gccatgcccaaggtgaagaacctgattgtgaagctgacgcccgttccagtggttaccaca
cgcacctccaggtctatgagcaaggatggagggaaggagaggagtaaggatggagggaag
gagaggagtaaggatggagggaaggagaggagtaaggatggagggaaggagaggagtaag
gagaggagtaaggatggagggaagcagaggagtaaggatggaggcaaggacaagagtaag
gatggaggcaaggacaagagtaaggatggaggcaaggacaggagtaaggatggaggcaag
gacaagagtaaggatggaggcaaggacaagagtaaggatggaggcaaggacaagagtaag
gatggaggcaaggacaagagtaaggatggaggcaaggacaagagtaaggatggaggcaag
gacaagagtaaggatggaggcaaggacaagagtaaggatggaggcaaggagaagagtaag
gatggaggcaaggagaagagtaaggaggaggtggaggaaggtgggggctctgaggaggac
agccgccgctccagccgcacaaagaccacacccctcaggaagtcaccggacgggaagaac
aagatggccgaatcctctccagagaacagtgactcagagggcaagagtcccagcaggctg
aagagtagagccaaaggcagctcggagaaggaacatgaggaggaggaggagcagcagcag
agcaatgcctcccccaaggtgaccgctgacccttctaaacaagaagtggactctgactct
gacgaggttctggacatcctgctccagactgcagcggcagaacacagctcggacgaggat
gcgcagcaggacgccgatggtaaccagggcaacagtagcttcaaaaggtgcctgttcaaa
ctcagcaagaaagatggagaggaggaggagaatgacaaggtgaagactgacaagaagctg
gcggccaaacgcaaactgaaagccgacgattcagacaactcagagtccgactcagacgaa
gacgcaaagaagaagaagaaaaagaagtcctcctcagcttctgccaaaaagacatccaag
aagaagggctcggacggctcctccgactcggacctggagatggagggactcagcaaactg
gcgacggggaaacggaggagcagccgtgtgaagaaggaaagagaggagaaggagaacaag
ggcggagatcggaggcggtcgtacgaactgaaacgcaaagccagaagtagaggagccaag
cagcaagattcatcgtctgatgacgatgaggaggagggaggagggtctggagaggagagt
ggagaccagcagaagattaaacctgatgacgatgaggaggagggaggagggtctggagag
gagagtggagaccagcagaagattaaacccatcgtggaggagacggtgctagcagggagg
ggaaccttccaccagtcctcaggagatgaaggtaaccatgacgcttctcagatggccgat
gaggaggacgatgatgatgagcctgagaacagaattgccaagaagatgctgctggcccag
atcaaggctaactactcttcaggagcagaggagagctctgacgaggacggagaagagaac
gaacagaagaaggggaagggaggagaggagcaggaggaggatgacgacgatgatgatgaa
gggggctctggctctgatgtggacatgaagacgagtgtggggcgtcgccaccggctgctc
cgccacaaactgacactgtacgaagtggagtcgggagaggagaaggagaaaccagccagc
aaggggaagaaggagaccaagaggaccagacggaaagtgggtagtgatgactcagcagac
tcagactttaaggagtcagctagcagcagtgagtcaggagttagtgaggagatcagtgag
aaggagtcttcatcagaggaggagtcggagtctgagaaggaaggaagtagccaaaagagg
accacacgctcctccaagaagaagaagaagaagaagaagaaggaggagaggagctacgcc
cagaagaagaaacggcgccgcatcaagacccaggattcttcatctgaagacaagagcggg
tcaggagaggacggctcggcgaaggaggatggagacactcctaaaggacagaggaagaag
atcagaaaaatcctcaaggacgacaagctgaggatggaaacgagggatgccctgaaggag
gaggaggagaggaggagacgcatcgctgagagggagcagctcagggagaaactcagagag
gtactcgtggtggaggaggcgtccgccgtggcttgtccaatcacaaccaagctggtgctg
gatgaagacgaggagaccaaggagcccatggtgcaggttcaccgcaatctggtcactaag
ctcaaaccacaccaggtcgacggggtccagttcatgtgggactgctgttgtgagtcggtg
aagaaaaccaacaagaactctggttctggatgtatcctggctcactgtatgggcctggga
aaaacactgcaggtggtaaccctcctccacacactactgctgtgtgaaaagttagacttc
tccacggctctgatcgtctgtcctctcaacaccgttctcaactggctcaatgagtttgag
aagtggctgtggcttcaaggacgctgtttgtgtgtgacggagctggccacggtgaagcgt
cctcaggagagagcgtctgctctgcagcagtggcaggaggatggaggaatcatgatcatt
ggctatgagatgtaccgtaacctcactcagggtagaaacatcaagagcaagaaactcaaa
gagaccttccagaagaccctggttgacccaggcccagattttgtgatctgtgatgagggc
cacatcttgaagaacgaggtgtcggccatctctaaagccatgaattccatcaagacccga
cggagagtggtgctcaccggcactccactgcagaacaacctcatagagtaccactgcatg
gtgaacttcatcaaggagaacctgctggggtcagtgaaggagttcaggaaccgcttcgtc
aaccccatccagaacgggcaggcagcggactccacagaccaggatgtacgcatcatgaag
aagagggcccacatcctctacgagatgctcaatggatgtgttcagagaagagactactct
gccctgaccaagttcctgcctcctaaacatgagtacgttgtgtgcgtcagagtcacgccc
atccagtgtactctataccgacactacctggagcacttaacaggtactgggaacgtggtg
gagnnggggtcgggtcgtgccggcaccaaactcttccaggacttccagatgctcagcaga
atctggacccatccctggtgcctgcagctggactacatcagcaaggaaaacaaggtatac
acagatgaggacagcatggagagtttcatcccattggagaccgaggaatcttctttaagc
atgacctctgaggacattgagaaacagaaaaagaagaagaagcgggggaaggccaggaag
aaggacagtgactcagacagtgacgctctcgaggtgattaaggagtggaacaccagctcc
cgagggggagacccctccagccgcaaccgggcggagccacaggaggaagtgcgtccggcc
tccagccctggcaccaggagtcctgactggcacaaggagtttgttacggaggctgactct
gagatcctggagcattctgggaaaatggtgctgctgtttgagattctccgcatggccgag
gaggtggaggacaaaattctggtgttcagtcagtctctcatctctctggacctgattgaa
gacttcctggagctgtctggccgagccaaagaggaggagaaaccttctccctacaaaggt
gaggggaaatggttccggaacatagactactaccgcttggacggctccaccaacgccctg
aaccggaagaagtgggcagaggagttcaatgacaccagcaacgtcagaggtcggttgttc
ctgatctcgaccagggctggttctctgggcatcaacctgatcggagctaacagggtcatc
atcttcgacgcgtcctggaacccgtcgtacgacatccaaagtatcttcaggctctaccgc
ttcggacagctcaagacctgctacgtctaccgattcctggctcagggtactatggaagag
aagatctatgaccgccaggtggctaaacagtctctatccttcagagtggtggatcaacag
cagatagagagacatttcaccatgaatgagctgacggagctctacgcctttgaacctgac
cttctggatgatcccactggcaagaagagcaagaggaccacgcctatgctgccaaaggac
cccttcctagctgagctgctccacagcaataaggagcagattgtgggctatcatgaacat
gactccctgctggatcacaaagaagaggaggctctcagcgaggaggaccgcaaagcagcc
tgggccgagtatgaggcagagaagaagggtctgtctctgcgtgtgaaccatggagcgtac
ggaggacagatggacatgggaggagctaacagctacttccccttcaacattgccgcactg
gcctctatgtccaaccctcagctggaggagttgatcaaccagggccgtcagaaggtgatg
gaggccaccaacgctctcaagttcctccccagagaatctctagaggacaccatcgggaga
gtgtggaaggagaacccagccctcacggagtcccaggtccaggccatggctctggggaga
caggccagtgtagagatggagctcaaacacagagaagctgtctacagagacgtcctcaat
aagcaacagactctaatgatgtacgttcagaaggtgatcaccaacaggaaggtgagagag
cagcagatggccatggccaaccaggcccagctgatgagccagatgaacggcatgctggga
gctggcgggatgagccagatggaactcttggggttgtaccaacagctgggggcgctacag
ggtcatcccacccacccctccatgggcggcaagaaccccggtccctccaagggcaacctg
taa
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