KEGG   Oncorhynchus gorbuscha (pink salmon): 124011679
Entry
124011679         CDS       T07892                                 
Name
(RefSeq) cullin-4B-like isoform X1
  KO
K10609  cullin 4
Organism
ogo  Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo03420  Nucleotide excision repair
ogo04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:ogo00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    124011679
  09124 Replication and repair
   03420 Nucleotide excision repair
    124011679
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:ogo04121]
    124011679
   03400 DNA repair and recombination proteins [BR:ogo03400]
    124011679
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ogo04147]
    124011679
Ubiquitin system [BR:ogo04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Cullin
     124011679
DNA repair and recombination proteins [BR:ogo03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      124011679
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      124011679
Exosome [BR:ogo04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   124011679
SSDB
Motif
Pfam: Cullin Cullin_Nedd8 SecA_SW DUF3292 PG_binding_4
Other DBs
NCBI-GeneID: 124011679
NCBI-ProteinID: XP_046181115
LinkDB
Position
LG23:complement(46581517..46598215)
AA seq 857 aa
MAHLFRLETTGLPSPNPPPPTQEARPAASDVNNDSSSITNSKKRKINRSEREDIDSISSS
PKTHNSSSSSTSQQIQKKLRFEDSVDFIGLDVKMAEESSSASCSSNKTKTVFLAGVVGHH
ANGLTKTAGSTTFSSSKPGAAKKLVIKNFKEKPKLPENYTHETWQKLKEAVEAIQNSTSI
KYNLEELYQAVENLCSHKISARLYKQLRVVCEDHIKAQIDQFREDVLDSTLFLKKIDNCW
QDHCRQMIMIRSIFLFLDRTYVLQNSMLPSIWDMGLELFRFYIISDMKVQSKTIYGILLL
IERERSGETIDRSLLRSLLSMLSDLQIYQDSFEQRFLEETNRLYAAEGQRLMQEREVPEY
LHHVNKRLEEEADRVITYLDQSTQKPLIATVEKQLLGEHLTSTLQKGLNHLLDENRIQDL
CLLYQLFSRVRGGVLVLLQHWIEYIKAFGSTIVINPEKDKTMVQELLDFKDKVDHIIDIC
FIKNEKFVNAMKEAFETFINKRPNKPAELIAKHVDSKLRAGNKEATDEELEKMLDKIMII
FRFIYGKDVFEAFYKKDLAKRLLVGKSASVDAEKSMLSKLKHECGAAFTSKLEGMFKDME
LSKDIMVQFKQCQNIPGNIELTVNILTMGYWPTYIPMEVHLPAEMVRLQEIFKTFYLGKH
SGRKLQWQSTLGHCVLKAEFKEGKKELQVSLFQTLVLLMFNEGEEFTLEEIKLATGIEDG
ELRRTLQSLACGKARVIHKVPKSKDVEDGDKFSCNDDFKHKLFRIKINQIQMKETVEEQA
STTERVYQDRQYQIDAAIVRIMKMRKTLSHNLLVSEVYNQLKFPVKPADLKKRIESLIDR
DYMERDKENPNQYNYVA
NT seq 2574 nt   +upstreamnt  +downstreamnt
atggctcatttgttccgattagaaacgacaggtttaccttcccctaatcccccaccgcca
acccaagaggctagaccagcagcttcagatgtaaataacgacagcagtagtatcacgaat
tcgaagaagaggaaaataaaccgttctgagagggaagacattgattcaatatcgtcatct
cctaaaacccacaattcctcttcgtcctctacttcgcaacaaatccagaagaagttgagg
ttcgaagattccgtagacttcataggactggatgtgaaaatggctgaggagtcgtcatct
gcatcgtgttcttcaaacaaaaccaaaacagtttttttggctggggttgttgggcatcat
gcaaacgggctgacgaaaactgcaggctccactaccttctccagcagcaaacctggagct
gcaaagaaactagtcatcaagaactttaaagaaaagcccaaattgcctgagaactacaca
cacgagacttggcaaaaactaaaggaggcggtcgaggccattcaaaacagcacttcaatc
aagtacaatcttgaggaactctaccaggctgtcgagaacctctgctcccataagatatct
gccaggctctacaaacagctacgggtggtttgtgaagaccacatcaaggcacaaatcgat
caattcagagaggatgtactggacagtaccctcttcctgaagaaaatagacaactgttgg
caagatcactgcagacaaatgatcatgattagaagtatatttttgttcttggaccgcacc
tatgttttacaaaactcaatgctcccatcaatctgggacatgggcctagagttgtttagg
ttttacataatcagcgacatgaaggtccagagcaagaccatctacggcatcctgctgctc
atcgagagggagcgcagcggcgagaccatcgaccgcagcctgctccggagcctactgagc
atgctctctgacctgcagatttatcaggactcctttgagcagcgctttctggaggagact
aatcggctgtatgctgctgagggacagcgactgatgcaggagagagaggtcccagagtat
ctccatcacgtcaacaaacgcttagaggaggaagcggacagagtcatcacgtatctagac
cagagcacacaaaaacctctcattgccactgtggagaagcaactactgggtgaacatctc
acttcaactctgcagaaaggcttgaatcacctgctagatgagaacagaatccaggacttg
tgtcttctctatcagcttttcagtcgtgtgagagggggcgtactggttctcctacagcat
tggatcgagtacatcaaggcctttggaagtacgattgtcattaaccctgagaaggacaag
accatggtacaggagctcctggacttcaaggacaaggtggaccacatcattgacatctgc
ttcataaagaacgagaagtttgtcaatgccatgaaggaggcttttgagaccttcatcaac
aagagaccaaacaaacctgctgagctcatagcaaaacacgtggattcaaagcttagggcg
ggtaacaaggaggcgaccgacgaggagctggagaagatgttggacaagatcatgatcatc
ttccgattcatttatggcaaagatgtttttgaggccttctacaagaaagatctggccaag
aggttgctggtgggaaagagtgcctccgtggatgccgagaagtccatgctgtcgaaactg
aaacatgaatgtggagcagcattcaccagcaagctggaaggcatgttcaaggacatggag
ctttccaaggacatcatggtgcagttcaaacagtgtcaaaacatccctggtaacattgag
ctgacggtgaacatcctcaccatgggatactggcccacctacatcccaatggaggtccat
ctgcccgcagagatggtgcgactgcaggagattttcaagacgttttacctgggcaagcac
agcggcaggaagctacagtggcagtcgacgttaggccattgcgttttaaaagctgaattt
aaagagggcaaaaaagagcttcaggtttccctgtttcagacgctagtgctgctcatgttc
aacgaaggagaggaattcaccttggaggagatcaagctagctacaggaatagaggatggc
gagctgcgacggaccctgcagtcgttggcgtgtggcaaggcacgggtcatccacaaagtc
cccaagagcaaagacgtggaggacggagacaagttctcctgcaacgatgacttcaaacac
aaactcttcaggatcaagatcaaccagatccagatgaaagaaacggtggaagagcaagcc
agcaccacggaacgagtctaccaggaccggcagtatcagatcgacgccgccatcgtccgg
atcatgaagatgaggaaaactctgagccataatctcttggtgtcggaagtgtacaaccaa
ctcaaattccccgtaaagcctgctgacctaaagaagagaatagagtctctgattgacaga
gattacatggagcgcgacaaggagaaccccaaccaatacaactatgtggcttaa

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