Oncorhynchus gorbuscha (pink salmon): 124011721
Help
Entry
124011721 CDS
T07892
Symbol
rfc2
Name
(RefSeq) replication factor C subunit 2 isoform X1
KO
K10755
replication factor C subunit 2/4
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo03030
DNA replication
ogo03410
Base excision repair
ogo03420
Nucleotide excision repair
ogo03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
124011721 (rfc2)
03410 Base excision repair
124011721 (rfc2)
03420 Nucleotide excision repair
124011721 (rfc2)
03430 Mismatch repair
124011721 (rfc2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ogo03032
]
124011721 (rfc2)
03036 Chromosome and associated proteins [BR:
ogo03036
]
124011721 (rfc2)
03400 DNA repair and recombination proteins [BR:
ogo03400
]
124011721 (rfc2)
DNA replication proteins [BR:
ogo03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
124011721 (rfc2)
DNA Replication Termination Factors
ELG1-RFC complex
124011721 (rfc2)
Chromosome and associated proteins [BR:
ogo03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
124011721 (rfc2)
DNA repair and recombination proteins [BR:
ogo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
124011721 (rfc2)
Check point factors
HRAD17(Rad24)-RFC complex
124011721 (rfc2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
AAA_22
AAA_14
AAA_16
Mg_chelatase
Viral_helicase1
AAA_24
AAA_11
RCF1-5-like_lid
Rad17
RuvB_N
AAA_19
MipZ
nSTAND3
AAA_18
AAA_assoc_2
ABC_tran
AAA_5
AAA_28
AAA_23
AAA_25
AAA_30
MeaB
NTPase_1
SLFN-g3_helicase
DNAX_ATPase_lid
RNA_helicase
FtsK_SpoIIIE
Motif
Other DBs
NCBI-GeneID:
124011721
NCBI-ProteinID:
XP_046181187
LinkDB
All DBs
Position
LG02:84813835..84820342
Genome browser
AA seq
353 aa
AA seq
DB search
MDVAMNEVDSEQIQTEVQLKKDESPAKLSSSGYELPWVEKYRPLKLNEIVGNEETVSRLE
VFAREGNVPNIIIAGPPGTGKTTSILCLARALLGPAMKDAVLELNASNDRGIDVVRNKIK
MFAQQKVTLPKGRHKIIILDEADSMTDGAQQALRRTMEIYSKTTRFALACNASDKIIEPI
QSRCAVLRYTKLRDEQIMMRLLEVVERENLVTSNDGLEAIIFTAQGDMRQALNNLQSTNS
GFGYINSENVFKVCDEPHPLLVKSMLEHCVNANIDEAYKIIEQLWALGYSPEDIIGNIFR
VCKTFQMPEYLKLEFIKEIGYTHMKVAEGVNSLLQMAGLLGRLCSKTATPDTS
NT seq
1062 nt
NT seq
+upstream
nt +downstream
nt
atggacgtggcgatgaatgaggtagattctgagcaaattcaaacagaagttcaactgaag
aaagatgagtcccctgcgaagttgtctagtagtggatatgagctgccatgggttgaaaaa
tacagacccttgaagttgaatgaaatagtaggcaacgaggagactgttagcagattggag
gtgtttgccagagagggaaatgtgccgaacatcattattgcaggtccccccggtacagga
aagaccaccagtattctgtgtttggcgcgagctcttctgggcccagccatgaaagatgct
gtcctggaactgaacgcctccaatgacagaggcatcgatgtagttcgaaacaagatcaag
atgtttgcccagcagaaagtcaccctccctaaagggagacacaagatcatcatcctggat
gaggctgacagtatgacagacggagcccagcaggccttgaggaggaccatggagatatac
tctaaaaccacacgcttcgctctggcatgcaacgcctccgacaagatcattgagcccatc
cagtcacgttgtgcagtcctgcgctacaccaagctgagggacgagcagatcatgatgcgt
ctgctggaggtggtggagagggagaacctggtcaccagcaacgacggcttggaggccatc
atcttcaccgctcagggagacatgagacaggcgctgaataacctacagtccacaaactct
gggtttggctacattaacagtgagaatgtgttcaaggtgtgtgatgagccacatcccctg
ttggtgaaaagcatgctcgaacactgtgtcaatgcaaacattgatgaggcttacaagatt
attgagcagctgtgggccctgggttactctcctgaggacatcatcggtaacatcttcaga
gtgtgtaagaccttccagatgccggagtatcttaagctggagttcataaaggagataggc
tacacccacatgaaggtggcagagggcgtgaactccctgctgcagatggcaggcctcctg
ggtcgactgtgcagcaagacggccaccccggataccagctaa
DBGET
integrated database retrieval system
