Oncorhynchus gorbuscha (pink salmon): 124011998
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Entry
124011998 CDS
T07892
Name
(RefSeq) retinoic acid receptor RXR-beta-A isoform X1
KO
K08525
retinoid X receptor beta
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo03320
PPAR signaling pathway
ogo04920
Adipocytokine signaling pathway
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
124011998
03320 PPAR signaling pathway
124011998
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ogo03000
]
124011998
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
ogo03310
]
124011998
Transcription factors [BR:
ogo03000
]
Eukaryotic type
Zinc finger
Cys4 hepatocyte nuclear factor 4-like
124011998
Nuclear receptors [BR:
ogo03310
]
2. Hepatocyte nuclear factor 4 like
2B. Retinoid X receptor (RXR)
124011998
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Gene cluster
GFIT
Motif
Pfam:
Hormone_recep
zf-C4
Nuc_recep-AF1
Motif
Other DBs
NCBI-GeneID:
124011998
NCBI-ProteinID:
XP_046181281
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Position
LG24:complement(30313883..30336215)
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AA seq
486 aa
AA seq
DB search
MRVATAILCHTQLTPLGMTLVIDSRSPDSSSVSSPPSGQRSPPLTPTAAAMTSLPPVTSA
VNSPISSMGSPFSVISSSLGSPCLPGTPSVGYGPISSPQINSTVSMSGLHAVSSSDDVKP
PFGLGGHSPGGPMLSQKRLCAICGDRSSGKHYGVHSCEGCKGFFKRTVRKDLSYTCRDNK
DCLVDKRQRNRCQYCRYQKCLACGMKREVVQDERQRSVQEERQRNKERESEVESTSAINE
EMPVEKILEAEMAVEQKTELHADGSSGDSSPNDPVTNICQAADKQLFTLVEWAKRVPHFS
ELALDDQVILLRAGWNELLIASFSHRSISVKDGILLATGLHVHRNSAHSAGVGAIFDRES
AHNAEVGAIFDRVLTELVSKMRDMQMDKTELGCLRAIILFNPDAKGLSSPSEVELLREKV
YASLESYCKQRYPDQQGRFAKLLLRLPALRSIGLKCLEHLFFFKLIGDTPIDTFLMEMLE
APHQLT
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atgagggttgcaactgccatactctgccatacccaattgacacccctgggcatgaccctt
gtaatagattcccgcagcccagacagctcctctgtgtcctcccctccctcgggccagcgc
tcgccacccctgacccccacagctgctgccatgacctctctgccgcccgtcacttcggcc
gtcaacagccccatcagcagcatgggctcgcccttttctgtcatcagctcctccctgggg
tcaccctgccttcccgggacaccctcggtgggctacggccccatcagcagcccccagatc
aactccacagtgtccatgtcggggctgcacgcggtcagtagctcggatgacgtgaagcct
ccgttcggactgggaggccacagcccagggggccccatgctctcccaaaagcgcctgtgt
gccatctgtggtgaccgctcctccggtaagcactacggagtgcacagctgcgagggctgc
aagggtttcttcaagcgcacggtgcgcaaggacctgagctacacctgccgggacaacaag
gactgcctggtggacaagcgccagcgcaaccgctgccagtactgccgctaccagaagtgc
ctggcctgtggcatgaagagggaagtggtccaagatgaacgacagagatccgtgcaggag
gagcgccagaggaacaaggagcgggagagcgaggtggagtcgaccagtgccatcaacgag
gagatgccagtggaaaagatcctagaggcagagatggccgtggaacagaagaccgagctg
catgccgatgggagctccggggacagctcgcccaacgacccggtcaccaacatctgccag
gctgcagacaagcagctgtttaccctggtggagtgggccaagagggtcccccacttctct
gagctggccctggacgaccaggtcatcctgctacgtgccggttggaacgagctgctgatc
gcttccttctctcaccgctccatcagtgtgaaggacggcatcctattggccaccggccta
cacgtgcacaggaacagtgcccacagtgccggcgtgggagccatcttcgacagggagagt
gcgcacaatgcagaggttggagccatatttgacagagttctcacggagctggtcagtaag
atgagagacatgcagatggacaagacggagctcggctgccttcgagccatcatcctcttc
aacccagatgccaagggcctgtccagccccagtgaagtggaattgctgagggagaaggtg
tacgcatcgctagagtcctattgtaaacagagataccccgaccagcagggcaggttcgct
aagctcctcctccggctgccagcgctgcgctccatcggcctgaagtgcctggagcacctg
tttttcttcaagctgattggcgacacccctatcgacacgttcctcatggagatgctagag
gcgccccaccagctgacctaa
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