Oncorhynchus gorbuscha (pink salmon): 124012026
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Entry
124012026 CDS
T07892
Name
(RefSeq) F-box only protein 41-like
KO
K10316
F-box protein 41
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ogo04121
]
124012026
Ubiquitin system [BR:
ogo04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
124012026
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Gene cluster
GFIT
Motif
Pfam:
zf-C2H2_FBX41
F-box-like
F-box
FAZ1_C
zf-C2H2
Borrelia_P83
Peptidase_C50
zf-C2H2_4
zf-C2H2_6
Motif
Other DBs
NCBI-GeneID:
124012026
NCBI-ProteinID:
XP_046181328
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Position
LG24:16164702..16255758
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AA seq
860 aa
AA seq
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MASLDLPYRCPRCGEHKRFRSLSSLRAHLEYNHTYETLYVLSKSNSVCDAAALLPLVADG
DLLLAPSVPGINRSNNINDPFDGLQLRPSAFRDFKERRFPCRELPCPDDLGGLSTNSNAA
ARYIPNVEFPLGEIFVKKAMSAAGDPRGSHGNQSTAVAVAANVAASAVEAAYEEGLARLK
ARAFERLELDERLEKLSEEVEQKIAVRVGRLQAELERKSGELERAKHESERLGQEKQDLE
DKASELSRQVDVSVEMLANLKQDLVSKEEELTHKQQEVTQIDQFLQETAAREANAKVRLQ
QFIEELLDRADRAEKQLQIISSCGTTPNGSMGRCSLPGSNKGSNNGRQRNSSVSGTSRGM
YQVSDRRSSPSTGASGRVKSFSQGSGGGYDSGDSVEMHPMEECPEGQYYHVQCRLGEGGG
QCYERAGVSRSWGLRKQAIQNWQRRPYRNSTEEGEEGEEGDVSDVGSRTTESEVEMWEQQ
ERRATMAETQQSGAPRSSGYRLGTGRSEGVHRHNKPCRHDRSLSRSNNEVISPEILKMRA
ALFCIFTYLDTKTLLRAAEVCRDWRFVGRHPAVWTRVLLENARISSKFLSTLSQWCTQTH
SLILQNLKPRQRGKKEVKEEYLKSTRGCLEEGLESLLKATGGNLLILKVSHCPNLLTDRS
LWLASCYCRALQAVTYRSATDPVGQEVIWALGAGCRDIISLQVAPLHPCQQPARFSNRCL
QTIGRCWPHLRALGVGGAGCGIQGLASLARNCMRLQVLELDHVSEVNQEVAAEVCREGLK
GLEMLVLTSTPVTPKALLHFNSVCRNLKSMVVQIGVEDYFEDPSSPEARKLFDEMVNKLQ
GLKKRPGFSKILHVKADILC
NT seq
2583 nt
NT seq
+upstream
nt +downstream
nt
atggcttctctggacctgccctaccgctgtcctcgttgcggggagcacaagcgcttccgg
tcgctgtcctccctccgcgctcatctggagtacaaccatacctacgagacgctctacgtg
ctctccaagtccaacagcgtgtgcgacgcagcagccctactccccctggtggccgacgga
gaccttctcctcgctccttctgtccccggcattaaccgcagcaacaacattaacgacccc
ttcgacggtcttcaactccggccttctgccttcagggacttcaaggagcgccgcttcccg
tgccgcgagcttccctgcccggacgacctcggcggtttatccacaaattccaacgccgcg
gctcgctacatccccaatgtagagttccccctgggggagatctttgtgaagaaagccatg
agcgcagccggggacccccgcggttcccacggcaaccaaagcacggccgtggcagtggcg
gcgaatgtggctgcgagcgcggtggaggcagcctatgaggagggcttggccaggctgaag
gcgagagcctttgagcgtctggagctggacgagaggctggagaaactctcagaggaggtg
gagcagaagatagctgtacgcgtgggccggctgcaggcggagctggagaggaagagcggc
gagctggagcgggccaagcatgagagcgagcggctgggccaggagaaacaggacctggag
gacaaggcgtcggagctctcccgccaggtggacgtttcggtagagatgctggccaacctc
aagcaggacctggtcagcaaggaggaggagcttacacacaaacaacaggaggtaacccag
atagaccagttcctccaggagacggcggcgcgcgaggccaacgccaaggtgcgcctgcag
cagttcatcgaggagctcttggaccgtgccgaccgcgccgagaaacagctgcagatcatc
agcagctgcgggaccacgcccaacggcagcatgggacgctgcagcctgcccggctccaac
aagggctccaacaatggacgccagaggaactccagcgtctcggggacgtccaggggcatg
taccaggtctctgaccgacgatcctctcccagcaccggagcgtcgggccgggtcaagtcc
ttctcccagggctcgggcgggggctacgacagcggcgacagcgtggagatgcaccccatg
gaagagtgccccgagggccagtactaccacgtccagtgtcggctgggggaagggggcgga
cagtgctacgagagggccggggtgtcccggagctgggggctccgcaagcaggccatccag
aactggcagcggagaccctaccggaacagcacggaggagggggaggagggcgaggagggc
gacgtgtcggacgtgggctctaggactaccgagtcggaggtggagatgtgggagcagcag
gagaggagggccaccatggccgagacgcagcagtctggagcgccgagatcatctggatac
cgcctaggcacagggaggtcggagggggtccaccgccacaacaagccgtgtcgccacgac
aggagcctgtcccggtccaacaacgaggtgatcagcccggagatactgaagatgagggcg
gctctgttctgcatcttcacctacctggacaccaagaccctgttgagggccgcggaggtc
tgcagggactggaggtttgtgggccgccaccctgccgtgtggacccgggtgctgctggag
aacgcccgcatctcctccaagttcctgagtacactgtcccagtggtgcacccagacccat
tccctcatcctccagaacctgaaaccacgacagaggggcaagaaggaggtcaaggaggag
tacctcaagagcacacggggttgtctggaagagggtctggagtccttgctgaaggctaca
ggagggaacctattgatcctcaaggtgtctcattgtcccaacctgctaactgaccgctcc
ctgtggctcgccagctgctactgccgagccctgcaggccgtcacatacaggagtgccaca
gaccctgtaggacaggaggtgatctgggctctaggagccggctgtagagacatcatctcc
ctccaggtggcaccactacatccatgccaacaaccggctcgcttcagcaaccgatgcctg
cagaccattggccgatgctggccgcacctcagagccctgggcgtgggcggggcaggatgt
ggcattcagggactagcctcgttggcgaggaactgcatgcgtttgcaggtgttggagctg
gaccatgtgagtgaggtcaaccaggaagtggcagctgaggtgtgcagggagggtctgaag
ggcctggagatgctggtcctcacctccaccccggtcacccctaaggccctgcttcacttc
aacagtgtgtgtcgtaacctgaagtccatggtggtgcagatcggggtggaggactacttc
gaggaccccagcagccctgaggctcggaagctgtttgacgagatggtgaacaagctgcag
ggcttgaagaagagaccgggcttctccaaaattctgcacgtgaaggcggacatcctctgc
taa
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