Oncorhynchus gorbuscha (pink salmon): 124012066
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Entry
124012066 CDS
T07892
Symbol
vars2
Name
(RefSeq) valine--tRNA ligase, mitochondrial isoform X1
KO
K01873
valyl-tRNA synthetase [EC:
6.1.1.9
]
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
124012066 (vars2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ogo01007
]
124012066 (vars2)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ogo03016
]
124012066 (vars2)
Enzymes [BR:
ogo01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.9 valine---tRNA ligase
124012066 (vars2)
Amino acid related enzymes [BR:
ogo01007
]
Aminoacyl-tRNA synthetase
Class I (U)
124012066 (vars2)
Transfer RNA biogenesis [BR:
ogo03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
124012066 (vars2)
Prokaryotic type
124012066 (vars2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
tRNA-synt_1g
tRNA-synt_1_2
tRNA-synt_1e
bHLH_ILI
Val_tRNA-synt_C
GMIP-like_FCH
Motif
Other DBs
NCBI-GeneID:
124012066
NCBI-ProteinID:
XP_046181397
LinkDB
All DBs
Position
LG24:58148545..58177639
Genome browser
AA seq
1093 aa
AA seq
DB search
MWRSACGLSVRAAERAIHRKCSSRLYAHNVEKPPPQSTPRTQAEKERRRRDKEEAILRSQ
HNNVEDQGMKWSEKERIAYSVSTPPGEKKDTTLPFPSSYSPEYVETSWYSWWEKEGFFTP
EINDRLPHAVNRSFSMCIPPPNVTGTLHLGHALTVAIEDALVRWRRMQGYKVVWVPGCDH
AGIATQTVVERRLFRERGKRRQDLSREEFLKEVWTWKKEKGEEIYHQLRILGASLDWSRS
CFTMDPGFSSAVTEAFVRLCDSGLIYRSEGLVNWSCALESAISDIEVDSKQLSGRTLLSV
PGYQNRVEFGTMVTFSYPIDGQDGEVAVSTTRPETMLGDVAIAVHPEDPRYQAVHGKQCR
HPFADRLLPIITDTMVDMELGTGAVKVTPAHDHTDFLLSQRHSLPRLTVIGGDGTMTPLC
GQWLEGVKRFDAREQVIDALTEKMLFRGKRDHAMSLPVCSRSGDVIEPLLKKQWFVRCGE
MAQRAIQAVDEGQLEIIPHFYTKTWSSWLSNISDWCISRQLWWGHQIPAYRVTLSDSTDT
QEELWVWGRSEEEARERAAGKYGVTADAITLTQDPDVLDTWFSSGLFPFAMLGWPQQTSD
LRQFYPNTILETGSDLIFFWVARMVMLGTELTGQLPFKQVLLHSLVRDKHGRKMSKSLGN
VIDPLDVISGISLERLQEKVEEGNLDPRESMVAMEAQRKDFPKGIPECGTDALRFALCSY
KAQGEDISLSVSQVLSCRHFCNKMWQTVRFTLGVLEDRGAELGTVEQTSPLNSMDQWVCS
RLYSTVLQCEQGFERYELHSVTAALHSFWLHSLCDIYLECIKPVLSQDSGGGALGLIDTV
HTGRGSQREKQVVRAVLYHCVSVSLALLSPFMPFLTEELWQRLYLLRGEGGDSAGASLCL
QPYPQSSQLAHWHFPQEEADFTLVQEVVRVARSLRAQCGMTKEKPDMWAVCSPSQAQILV
HFGPAVRTLGRITKLHLHCPQGAGSLSFPSAPLPPKGSAVGVVDHSCQLHLNVQGGVNVS
KLSLQLSQRREKLLSKLEQSLSRTRVPNYFQKVPERVRIETENKISALEQELRNIEEQLS
ALQGPPKHNSGQK
NT seq
3282 nt
NT seq
+upstream
nt +downstream
nt
atgtggaggtccgcctgtggcctctctgtgagggcagcagagagggcaatacacagaaaa
tgttcaagtaggctctatgctcacaatgtggaaaaacctcctcctcaatctactccccgg
acccaggcggagaaagagaggcggaggagagataaggaggaggccatactgagaagtcaa
cacaacaatgttgaagatcaaggaatgaaatggagtgagaaagagaggatagcgtacagt
gtttcaacacctcctggggagaagaaagacaccaccctgcccttcccttcgtcctacagc
ccggagtatgtggagaccagttggtactcgtggtgggagaaagaaggcttcttcacccca
gagatcaatgacagactgccacatgctgtgaatcgctccttctcaatgtgtatccctccg
cctaatgtgactggcacgctgcacctcggccatgcactcacagtggccatagaggatgca
ttggtccgctggaggaggatgcagggctacaaagttgtctgggtaccaggctgtgaccat
gcaggcatcgctacgcagacggtggtggagaggaggttgtttagggaacgaggcaagcga
agacaggacctcagcagggaggagtttctaaaggaggtgtggacgtggaagaaagagaag
ggagaggagatctatcaccagctgaggatacttggtgcgtctctggactggagcagatcc
tgcttcaccatggatccaggcttcagcagtgctgtgaccgaggcctttgtaaggctgtgt
gactctggtctgatctatcgctctgaggggctggtcaactggagctgtgctttggagtcg
gccatctctgatatagaggttgactccaagcagctgtctggcagaaccctgttgtctgtc
cctggctaccagaacagggtggagtttgggaccatggtcacctttagctaccctatagac
ggccaggatggagaggtggcagtgtcgaccactcgtcctgagaccatgttgggtgatgtg
gccatcgctgtgcatcccgaggaccctcgatatcaggcagttcatggtaaacagtgcaga
cacccattcgctgaccgactcttacccatcatcactgacactatggtggacatggagctg
ggtacaggtgctgtaaaagttactccagctcacgaccacactgacttcctgctttcccag
cggcactctcttcctcgcctcactgtgattggaggagacggcacaatgacccctctctgt
ggtcaatggctggagggagtgaagcgttttgatgccagagaacaagtgatcgatgcactg
acagagaagatgctcttcagagggaaaagggatcatgccatgtctttacctgtctgcagt
cgttctggggatgtcattgaacctttgttgaagaagcagtggtttgtgcgttgtggagag
atggcccagagagccatacaggcagtagatgagggacagttagagatcattcctcacttc
tacaccaaaacatggagtagctggctctccaacatcagtgattggtgcatatccaggcag
ctttggtggggtcatcagattccagcctatcgagtgactctctcagattccactgacact
caggaggagctctgggtctggggcaggagtgaggaggaggccagagagcgggctgctggg
aaatatggagtgactgctgacgccattacactgactcaggaccctgatgtattggacacc
tggttctcctcagggctcttcccatttgccatgttgggctggccacagcagacaagtgac
ctgaggcaattctaccccaacactatcctggaaacaggaagtgacctcatcttcttctgg
gtggccaggatggtgatgcttggcacagaactgactgggcagctacccttcaaacaggtg
ctcctccactctctggtgagggataagcatggcaggaagatgagtaaatctctgggaaat
gtcatcgaccctttagatgttatctctggcatctctctggagaggctccaagagaaagtg
gaggagggcaaccttgacccccgtgagagcatggtcgccatggaagcgcagaggaaagac
ttccctaaggggatcccagagtgtggtactgacgcactccgcttcgcactctgctcttac
aaggcccagggtgaggacatcagtctgtccgtgtcccaggtgctgagctgtagacacttc
tgtaacaagatgtggcagacagtgagattcacgctgggtgtcctggaggaccgtggggct
gaactgggaacagtggaacagacctctcctctgaacagtatggaccagtgggtttgttct
cggctctatagcacggtgctccagtgtgagcagggctttgagagatatgaactccactct
gttaccgctgcccttcactccttctggctgcacagcctctgtgacatctacctggagtgc
atcaagccagtgctgagccaggactctggcggcggggcgttgggtctgatcgacacagtg
cacactgggagaggtagccagagagagaagcaggtggtcagggctgttctctaccactgt
gtgtctgtctctctggccctcctctctcccttcatgcccttcctcactgaggagctgtgg
cagaggctctaccttctcaggggagagggtggtgatagcgccggggctagcttgtgtcta
cagccatacccacagtcttcacaactggcacactggcacttcccccaggaggaagcagac
ttcactctggtccaggaagtggtgagagtagccaggtccctcagggcccagtgtggcatg
accaaggagaagcctgacatgtgggccgtgtgttcgcccagccaagcccagatcctggtc
cactttggccctgctgtacggaccctgggccgaatcaccaagctccacctccactgtcct
cagggggccggctccctgtccttcccgtcggctccccttccccctaaaggcagtgctgtg
ggtgtggtcgaccactcctgtcagttacacctcaatgttcagggcggtgtgaatgtgagc
aaacttagtctccagctctcccaacgcagggagaagctcctctctaaactggaacagtcc
ctctctcgaacccgtgtgccaaactacttccagaaggttccagagcgagtgaggatagag
acagagaacaaaatctcagccttggagcaggagctgaggaacattgaggagcagctgtca
gcactacagggacctccaaaacacaactctggtcaaaagtag
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