KEGG   Oncorhynchus gorbuscha (pink salmon): 124012131
Entry
124012131         CDS       T07892                                 
Name
(RefSeq) vacuolar protein sorting-associated protein 28 homolog
  KO
K12184  ESCRT-I complex subunit VPS28
Organism
ogo  Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:ogo00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    124012131
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ogo04131]
    124012131
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ogo04147]
    124012131
Membrane trafficking [BR:ogo04131]
 Endosome - Lysosome transport
  Endosomal sorting complexes required for transport (ESCRT)
   ESCRT-I complex
    124012131
Exosome [BR:ogo04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   124012131
  Exosomal proteins of other body fluids (saliva and urine)
   124012131
  Exosomal proteins of colorectal cancer cells
   124012131
  Exosomal proteins of bladder cancer cells
   124012131
SSDB
Motif
Pfam: VPS28
Other DBs
NCBI-GeneID: 124012131
NCBI-ProteinID: XP_046181540
LinkDB
Position
LG24:complement(50062497..50073603)
AA seq 223 aa
MFHGIPVAGGMGGAPVNKPELYEEVKLYKNAREREKFDNMAELFAVVKTLQALEKAYIKD
CVTPNEYTAACSRLLVQYKAAFKQVQGSDVGSIDDFCRKYRLDCPLAMERIKEDRPITIK
DDKGNLNRCIADIVSLFITVMDKLRLEIRAMDEIQPDLRELMETMNRMSNMPPDNEAKDK
VTLWLTTLSSMSASDELDDSQVRQMLFDLESAYNAFNRFLHSS
NT seq 672 nt   +upstreamnt  +downstreamnt
atgtttcacggaatacctgtcgcaggaggtatgggaggagctcctgtcaataaacctgaa
ttgtatgaggaagtaaaattgtacaagaatgccagagagagagagaagtttgacaacatg
gcagagctatttgctgtggtgaagacccttcaggccctggagaaagcttacatcaaagac
tgtgtgactcctaatgagtacacagctgcttgctccaggctactggtgcagtacaaggct
gctttcaaacaggtccagggatctgacgtgggttctatcgacgacttctgtaggaagtac
agacttgactgcccgctagctatggagagaatcaaggaggatcgaccaatcaccatcaag
gatgacaagggcaacctgaatcgctgcattgctgatatcgtatcgctctttatcacagtg
atggacaagctacgtctggaaatccgggcgatggatgagatccaaccagacctgagagag
ctgatggagaccatgaacagaatgagcaacatgcccccagacaatgaggccaaggacaaa
gtcaccctctggttgaccactctcagcagcatgtcagcctctgatgagctggatgactcc
caggttcgccagatgctgtttgacctggagtcagcctacaacgccttcaatcgcttctta
cactcctcctaa

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