Oncorhynchus gorbuscha (pink salmon): 124012152
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Entry
124012152 CDS
T07892
Symbol
usp53b
Name
(RefSeq) inactive ubiquitin carboxyl-terminal hydrolase 53 isoform X1
KO
K27919
inactive ubiquitin carboxyl-terminal hydrolase 53
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ogo03037
]
124012152 (usp53b)
Cilium and associated proteins [BR:
ogo03037
]
Other cilia and associated proteins
Stereociliary proteins
124012152 (usp53b)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
Motif
Other DBs
NCBI-GeneID:
124012152
NCBI-ProteinID:
XP_046181577
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Position
LG24:19112713..19167400
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AA seq
1129 aa
AA seq
DB search
MACQLPLPSMSSCGKPPPLSGEGSGSNSLAWVKLFKKPGGVGGGGGLGKSYQPGSMLSLA
LTKGLLNEPGQNSCFLNSAVQVLWQLDIFRRSLRQLPGHFCLGDACIFCALKSIFSQFQE
SRERALPSDSLRHALAETFKDEQRFQLGHMDDAAECFENILERIHLHIVSDTATEACTSK
SCITHQKFAMTLYEQFVCRSCGASSDPLPFTELVHYVSTTALCQQVGHVLGKNDRLRSDM
FGELLQAANTIGDLRNCPSNCGQSIKIRRVLLNCPEIVTIGFVWDAEQSDLTEDVVRSLG
PHLNLSGLFNRVTDENAKRSELRLVGMICFSSKHYSAFAYHTKSSKWVFFDDATVKEIGS
KWKDVASKCIRGHFQPLLLFYTNLEGTPVSSEDAPRQTTMCPRFKANINGEVPAGMKKLD
SVREKAGPLRSNQGPYKQMLPPPSTSGYKRVKGPPASPNTFRDPSKETSQRVVEGIKKEA
ERGHRKLDPHKDMAYARSPSEGGLRQHADQRLRGGSGARADKLSSSHQNRASQDPHSQSC
APGGHSWRQETSPGRQEQDGSQDAWEKDGGSGAGRNKAKPSWRPIREVLNVDSVLNDLER
RQQQQQHGGGGGSPRLSKPSRQERPHGSERDNRDWEKERERDKERERERLRIREERKQQK
CLMTIYEDEQRQETESHSSLESEGRASGHGDQGGGGGGSRGGGRAKGGPKALLRSDTWTI
QRTESGYESSDRLSSGSTNPDSPGVDSFAGKEQQLTPEVQSQSRGQLHPNRCDSKPDAVH
SSLHQGKHQLTTQGKNCDHQVSHLLKSSPSSRRKCRYSSGSSKKGAGLERDASSSDNRSS
HMMGSPEMSNNNRGGHHGDSPAVRRLGKTSSSEWNNSDDLAGNLSEPEDSAYRSSNIKPP
LSESPCPPHHLAFHQPPHIELEEPSSQHQPSMPSLPHPKAAQRASPHQGDVGRHCFRPRL
LQEPSQTSPRPSVRPTLASHNPSPNQRSESNGPLQRPSSSASSKSGSDPERSNPSSGESE
ERLPICRPSGAESAAAQGVSLTTYFSVDNCMTDTYRLKYHHQRPLLLSAIMPKAPTEPGE
HPSHHLHPANTHSMLDPPKTRPDAGHNSNKPTAKWNPVTAKGLDERGYL
NT seq
3390 nt
NT seq
+upstream
nt +downstream
nt
atggcctgccagctccctcttcccagtatgtccagctgtggcaaacctcccccactctcc
ggagaagggtcaggctctaactctctggcatgggtcaaactcttcaaaaagcctggaggt
gttggtggtggtgggggtctggggaagtcctatcagccagggagcatgttgtctctggct
ctcaccaaaggcctgctgaacgaaccaggccagaatagctgcttcctcaacagtgccgta
caggtgttatggcagttggacattttcaggaggagtttgagacagcttcctggtcatttt
tgtctaggggatgcgtgcattttctgcgctttaaagagtattttcagccagttccaggag
agccgagagcgagcgttgccttcagatagcctgcgccacgcccttgccgaaacctttaag
gacgagcaacgcttccaactaggccacatggacgacgctgcagagtgctttgagaacatt
ctggagagaattcacctgcacatagtttctgacacagcgactgaggcctgcacatccaag
tcctgcattacccaccagaagtttgccatgacactttatgaacagtttgtatgtcgtagt
tgtggcgcctcctcggaccccctgcctttcacagagctagtgcattatgtttccaccaca
gccctatgccaacaggtgggccacgtcctggggaagaacgacaggcttcggtcggacatg
ttcggggaattgctgcaggcggcaaacaccatcggtgacctacggaactgtccgagcaac
tgtggccagagcatcaaaatccgtcgggttctcctgaactgcccagagatcgtcaccatt
ggcttcgtgtgggacgcagagcagtctgaccttacagaggatgtggttaggtcactgggt
ccacatctcaacctctcggggctgttcaaccgggtcactgatgagaacgccaaaaggagt
gagttacgtctcgtgggaatgatttgtttctccagcaaacattactctgcgttcgcttat
cacaccaagtcctcaaaatgggtcttctttgatgacgccaccgtgaaagagatcggatcc
aagtggaaagacgtggcctctaaatgcatccggggacatttccaaccactgctcctgttc
tacactaacctggaggggaccccagtctccagcgaggacgcacccagacaaacaaccatg
tgtccccgctttaaagccaacatcaacggggaagtgccagcagggatgaagaagctggat
tctgtccgggagaaagcaggcccactccgctccaaccaggggccctataagcagatgcta
cctccaccctccacctcaggctacaaaagagtgaaaggcccacctgctagtcccaacaca
ttccgggatccttccaaggagacttcccagagggtggtagaagggataaagaaagaggcc
gaaagagggcatcgaaaactagatccacacaaagatatggcctatgccagatccccttct
gagggcgggctgaggcagcacgccgaccagaggttgcgaggcgggagtggcgcccgggct
gacaagttgtcatcctcccaccagaacagagcttcccaggacccacactctcaatcctgt
gcccctggtggacacagttggagacaggaaacctcccctggtcgccaagaacaggacggc
agccaggatgcgtgggagaaggatggcgggtcgggagcgggccgcaacaaagccaagccc
tcctggaggcccatccgggaagttctaaacgttgacagcgtcttgaatgaccttgaacga
cggcaacaacagcagcagcacggcggcggtggtggtagcccccggctctctaaaccctcc
cgtcaggagaggcctcacggcagcgaacgggacaaccgggactgggaaaaagagcgggaa
agggataaagagcgggaacgggagcgtctcaggataagggaagaacgcaagcagcagaag
tgcttgatgacgatttacgaggacgagcagcggcaggagacagagagccacagctccctc
gaatcggagggcagggcaagtgggcacggagaccagggcggtggagggggtgggagcaga
ggtggagggagggccaagggtgggcccaaagcccttttgcgcagcgacacctggacaatc
cagaggactgagtcgggatacgagagcagcgaccggctgagcagcggctccaccaaccct
gactcgcccggggtagacagctttgccgggaaggagcagcagttgacaccagaggtgcag
tctcagagcaggggtcaacttcacccaaacagatgtgattcaaaacctgacgcggtacac
tcctctttgcatcaaggcaaacatcaactgacaactcagggaaagaactgcgaccatcaa
gtttcacatctcctgaaaagtagtccaagttcaaggcgaaaatgtagatacagctctggc
agttctaagaaaggagcaggtctagagagggacgcaagctcctcagacaacaggagtagt
cacatgatgggatcgccagagatgagtaacaacaacagaggtggtcaccatggcgacagc
cctgccgtgcggcgcttgggtaaaaccagcagctcggagtggaacaactctgacgacctg
gctggaaatctctcggaaccagaggacagtgcctaccgctccagcaacatcaagccccct
ctgtccgagtctccctgtcccccccaccacctggccttccaccaacccccccatatcgaa
ctggaagaaccctcatctcaacatcagccctccatgccgtcactgcctcaccctaaagcc
gcccagcgagcttcccctcaccagggggatgttggccgccattgcttccgtcccaggcta
ctccaagagccttcccagaccagcccccggcccagcgtccggcccaccctggcctcacat
aaccccagccccaaccagaggtcggaatccaatggccctctgcagaggccctcgtcgagt
gccagctccaagtcgggctcggatccagaaaggagcaacccgtcgtcgggcgaaagcgag
gagaggctccccatctgcaggccatctggagccgagtcagcggcagcccaaggggtttcc
ctcaccacgtacttcagcgtggacaattgcatgacagacacatacagacttaagtaccat
caccagcgacccctcctactctcagctatcatgcccaaagcaccaacggagcccggagaa
caccccagccaccacctgcaccctgcaaacacacactccatgctagacccacccaaaacc
aggcctgatgcaggccataacagcaataagcccactgcaaaatggaacccagtgacagcc
aaaggactggatgagcgtggctatttgtga
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