Oncorhynchus gorbuscha (pink salmon): 124012172
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Entry
124012172 CDS
T07892
Name
(RefSeq) protein argonaute-4-like isoform X1
KO
K11593
eukaryotic translation initiation factor 2C
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ogo03019
]
124012172
03036 Chromosome and associated proteins [BR:
ogo03036
]
124012172
Messenger RNA biogenesis [BR:
ogo03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
124012172
Chromosome and associated proteins [BR:
ogo03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
124012172
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
124012172
microRNA pathway
RISC loading complex
124012172
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
ArgoMid
ArgoN
PAZ
ArgoL1
ArgoL2
Motif
Other DBs
NCBI-GeneID:
124012172
NCBI-ProteinID:
XP_046181605
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Position
LG24:complement(27464413..27505052)
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AA seq
888 aa
AA seq
DB search
MEALGPDPPIGPPAPPSLFQPPRRPGMGTVGKPIRLLANHFQVQIPKIDVYHYDIDIKPE
KRPRRVNREVVDTMVRHFKMQIFGDRQPGYDGKRNMYTAHPLPIGRDRVDLEVTLPGEGK
DQMFKVSLQWVSVVSLQMLLEALSGHNEVPEDSVQALDVITRHLPSMRYTPVGRSFFSPP
EGYYHPLGGGREVWFGFHQSVRPAMWNMMLNIDVSATAFYRAQPVIEFMCEVLDIQNINE
QTKPLTDSQRVKFTKEIRGGWGPAGLKVEVTHCGQMKRKYRVCNVTRRPASHQTFPLQLE
NGQAMECTVAQYFKQKYSLQLKYPHLPCLQVGQEQKHTYLPLEVCNIVAGQRCIKKLTDN
QTSTMIKATARSAPDRQEEISRLVKSNSMVGGPDPYLKEFGIVVHNDMTEVTGRVLPAPM
LQYGGRLSTDTGRDCGRGLSPQNKTVATPNQGVWDMRGKQFYAGIEIKVWAVACFAPQKQ
CREDLLKSFTDQLRKISKDAGMPIQGQPCFCKYAQGADSVEPMFKHLKLTYVGLQLIVVI
LPGKTPVYAEVKRVGDTLLGMATQCVQVKNVVKTSPQTLSNLCLKINAKLGGINNVLVPH
QRPSVFQQPVIFLGADVTHPPAGDGKKPSIAAVVGSMDGHPSRYCATVRVQTSRQDLSQE
QLYSQEVIQDLTNMVRELLIQFYKSTRFKPTRIIYYRGGVSEGQMKQVAWPELIAIRKAC
ISLEEDYRPGISYIVVQKRHHTRLFCSDKTERVGKSGNVPAGTTVDSTITHPSEFDFYLC
SHAGIQGTSRPSHYHVLWDDNCFTADELQLLTYQLCHTYVRCTRSVSIPAPAYYARLVAF
RARYHLVDKDHDSAEGSHVSGQSNGRDPLALAKAVQIHYDTQHTMYFA
NT seq
2667 nt
NT seq
+upstream
nt +downstream
nt
atggaagcgctcggacccgacccccctataggcccgccggccccgccctccctcttccag
cccccacggaggcctggcatgggcaccgtggggaagcccatccgcctgctggccaaccac
ttccaggtgcagattcccaagattgatgtctatcactacgatatcgacatcaagcctgag
aaacggccaaggagggttaacagggaggtggtggacacaatggttcgccacttcaagatg
cagatctttggtgatcgacaaccgggctacgacgggaagagaaacatgtacacggcccat
ccactacccatcgggagagacagggtggatctggaagtaactctgccgggggagggtaag
gaccagatgttcaaggtgtctctgcagtgggtgtcagtggtgagcctgcagatgctcctg
gaggccctgtcgggccacaacgaggtccccgaggactctgttcaggccctggatgtcatc
acccgccacctgccttccatgaggtacaccccagtggggcgctccttcttctcccctccg
gagggctactaccaccccctgggcggagggagggaggtgtggttcggcttccatcagtcg
gtacgtcctgccatgtggaacatgatgctcaacatcgatgtctccgccactgctttctac
cgtgcccagcccgtgattgagttcatgtgcgaggtgctcgacatccagaacatcaacgag
cagaccaagccactcaccgactcccaacgcgtcaagttcaccaaggagatccgaggtggg
tggggacctgcaggtctgaaagttgaggtcacccactgtggtcagatgaagaggaagtat
cgcgtgtgcaatgtcactcgccgccccgccagccaccaaacgttccccttacagctggag
aatggccaggccatggagtgtaccgtggctcagtacttcaagcagaagtacagcctacag
ctgaaatatccccacctgccctgcctacaagtggggcaggaacagaaacacacctaccta
cccctggaggtttgtaacattgtggccgggcagcgctgcatcaagaagctgacagacaac
cagacctccaccatgatcaaagctacagcacgttctgcacccgacaggcaggaagagatc
agccgactggtcaaaagcaacagcatggtgggcggtcccgacccttacctgaaggagttc
ggaatcgtggtgcacaacgacatgacagaagtgactggccgagtcctcccagcacccatg
ctgcagtatgggggccggcttagtaccgacactggccgggactgtggcaggggactctct
ccgcagaacaagacagttgccacgcctaaccagggcgtatgggacatgcgggggaagcag
ttctacgccgggatcgagatcaaggtgtgggccgtggcctgcttcgccccacagaaacag
tgcagagaggacctgctcaagagcttcacagaccaactgagaaagatctcgaaggatgcc
ggtatgcccatccagggccagccgtgtttctgtaaatacgcccagggagcggacagcgtg
gaacccatgttcaaacacctcaagctgacttatgtgggactgcagcttatcgtggtcatc
ctgcctggcaaaacccctgtctacgcggaggtgaagcgggtaggagacactctcctgggc
atggccactcagtgtgtccaggtgaagaacgtggtgaagacatccccccagaccctctcc
aacctctgcctcaagatcaacgccaagctggggggcatcaacaacgtcctggtgccccat
cagagaccctctgtgttccagcaacccgtcatcttcctgggggcagacgtcactcatcct
ccagccggcgacggcaagaagccctccatcgcggcggtggtgggcagcatggacggccac
cccagccgctactgtgccacggtgcgcgtgcagacgtcgcgccaggacctgtcccaggag
cagctgtacagccaggaggtcatccaggacctgaccaacatggtgcgtgagctgctgatc
cagttctacaagtccacgcgcttcaagcccacccgcatcatctactaccgtggcggcgtg
tccgagggccaaatgaagcaggtggcgtggccagagctgattgccatcaggaaggcctgt
atcagcctagaggaggactaccgaccgggcatctcctacatcgtggttcagaaacgccac
cacacccgactcttctgctcagacaagaccgagagagttggaaagagtggcaacgtccca
gccggaaccacggtggacagcacaatcacccacccctcagagtttgacttctacctgtgc
agccatgctgggatccagggcaccagccggccctcccactaccacgtcctgtgggacgac
aactgcttcacggctgacgagctccagctgctcacctaccagctgtgccacacctacgtc
cgctgcacccgctctgtctccatccccgcgccagcctactacgcccggctggtggccttc
cgcgcccgctaccacctggtggacaaagatcacgacagtgcggagggcagccacgtgtcg
ggccagagtaacggtcgggacccccttgccctggccaaggcagtccagatccactatgac
actcagcacactatgtatttcgcctga
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