Oncorhynchus gorbuscha (pink salmon): 124012302
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Entry
124012302 CDS
T07892
Name
(RefSeq) sorting nexin-13-like isoform X1
KO
K17925
sorting nexin-13
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ogo04990
]
124012302
Domain-containing proteins not elsewhere classified [BR:
ogo04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
124012302
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PXA
Nexin_C
RGS
PX
Rep3_C
DUF6395
Motif
Other DBs
NCBI-GeneID:
124012302
NCBI-ProteinID:
XP_046181722
LinkDB
All DBs
Position
LG24:complement(43985322..44015194)
Genome browser
AA seq
1013 aa
AA seq
DB search
MSNDVANRRISSAQLIQASLSVWGWGGLGVVLFLITFGPFAIFYLAFYICCVVGGGFAVT
LLFGKTNSERHLEKCEHSYLPATQTGILKTLDEMRLEQKPIKIDRRLTGSNYIDEPLQQV
IQFALRDYIQYWYYTLSEDESFLLEIRQTVQNALVQFSTRSKEVDWQPYFTTRLVDDFAT
HLRVFRKAQDRLERRDDNKQRDLSEDIVESFFEAEVEMERSVCRDVVCTSLKDEEGFLRD
LCEVLLYLLLPPGDFHNKNMRYFLREILARGVLLPLVNQLSDPDYINQFVIWMIRDSSCN
YEAFMNILKLTDKVSELEAVKDKALEELQYLRSLDTAGDDINVIKNQINSLLFVKKVCET
RIQRLQSGKEVDTLKLAANLGKLCIIPLEHVLVHNIALQFFMDYMQAAGAQAELFFWLTV
EGYRVTAQQQLEVMEGWQKDGKKGGSTQGLLKAAALGVYEQYLSDKASPRVQVDEVSVVK
LREKLQKEGDPTPEIFDEIQRKVYDMMLRDERYYPSFRQSPLYIRMLAELDMLKEPSYRG
SDDGDGESFNGSPTGSINLSLDDLSNSCHDDNIQLHAFISDTDMCGYNSSGLKNVTLSKC
LDAVRSLDAVLSPNTTRRQSRVCNDHGKTYALYAITVCRRNHDGSEDSWKTYRRYSDFHD
FHMRITEQVKFENLMSILKLPGKKTFNNMDRDFLEKRKKDLNAYLQLLLNPEMMKACPTL
VHYVYDFLENKQYSKGKGDFARKMDTFVNPLRSSMRNVSNAVKRLPDSLAEGMNTAADNM
GRMSEKLGQDIKQSMFKVPPLLPKSDVDPEHCRVSAQLDDNVCVFQVDDNIPLRVMLLLM
DEVFDLKERNQWLRRNIKNLLQQLIRATYGDTINRKIVDHVDFMTAPEQVADYVKKFRDS
YWPNGILAESPPRRDKNIRMRTRVAAKTNLLGIMPDELKHIIGADTTRKGILRVFDMFQH
GPMNRRLVYVLLEGFLETMFPQYKFPELFVKLHSRSPRTARYTQKLKSTSLKR
NT seq
3042 nt
NT seq
+upstream
nt +downstream
nt
atgagtaacgacgttgctaacaggagaatctcttcagctcaactgattcaggccagtctg
tctgtgtggggatgggggggtctaggagtggtgctgttcctcatcacttttggacccttc
gctatcttctacctggccttctatatctgctgcgttgtaggcggtggttttgcggtcact
ctgttgtttgggaagaccaactcagagagacatcttgagaagtgtgaacactcctacctg
ccagccacacaaacgggtatactgaagacgttggatgagatgaggttggagcagaagcct
ataaagatagataggagactgactggctccaactacatagacgagcctctgcaacaggtc
atccagtttgcattgagagattatattcagtattggtattacactctgagtgaggatgag
tctttcctgctggaaatcaggcagactgtccagaacgctttggtccagttctctacacgg
tctaaagaggtggactggcagccttatttcaccaccagactggtggatgacttcgctact
cacctccgagtcttcagaaaggcccaggacagactggagcgcagggatgacaataaacag
agggacttgtcggaggatatagtggagtcattttttgaggcggaggtagagatggagagg
agcgtctgcagagatgtggtctgcacctccctgaaggatgaagaagggttcctgagggac
ttgtgtgaggtgctgctctacctgttactacctcctggagacttccacaacaagaacatg
agatacttcctcagggagattctggcgcgaggcgttctacttcctctggtcaaccagctg
agtgatcctgattacatcaaccagtttgttatctggatgatccgggactctagctgtaac
tacgaggcgtttatgaacatcttgaagctgacagacaaagtgtctgagctggaggctgtt
aaagacaaggccctggaggaactacagtacctacgatcactggacaccgcaggagatgat
atcaatgttataaagaatcagatcaacagtctgttgtttgtgaagaaggtctgtgagacc
aggatacagaggctacagtcagggaaggaagtggatactctgaaactagcagctaatttg
ggcaagctgtgcatcatcccactggaacacgtccttgttcacaacatcgccttgcaattc
tttatggactacatgcaggcggctggggcccaggcagagctgttcttctggctgacagtg
gagggctacagagtaacagcccagcaacaactagaggtgatggagggatggcagaaggat
ggaaagaagggaggttccactcaaggactgctgaaggctgcagcattaggggtctatgaa
cagtacctgtctgataaggcatcccccagggtacaagtagatgaggtgtctgtagtcaaa
ctaagagagaagctacagaaggaaggagaccccacgccagagatattcgacgagatccag
agaaaagtgtatgacatgatgcttcgtgatgagaggtactacccgtcgttcagacagagt
cccctctacatcaggatgttagctgaactggacatgctcaaagaaccctcttatagagga
tcagatgacggagatggagaatcgttcaacggttctccaacaggaagcattaatctatct
ctggatgacctttcgaattcctgccatgacgacaatatacagctacacgccttcatctct
gacacagatatgtgtgggtacaacagtagtggccttaaaaacgttaccctgtcaaaatgc
cttgatgctgtaagaagcctagatgcagtgttgtctcctaacactacaagacggcagtcc
agggtgtgtaatgaccacggcaagacctacgccctctacgccatcaccgtgtgccgccgt
aaccacgacggcagcgaggactcctggaaaacctaccgccgctactccgacttccacgac
ttccacatgaggatcacggagcaggtaaagtttgagaacttgatgtcgatcctgaagctg
ccagggaagaagacgttcaacaacatggacagagacttcctggagaagaggaaaaaagat
ctcaacgcatacctacagctgctgctgaatccagagatgatgaaggcctgtcctactctg
gttcactatgtctatgacttcctggagaataagcaatacagcaagggcaagggagacttc
gcacgcaagatggatacgtttgtgaacccgctgcgtagctcgatgcgtaacgtgtctaac
gcagtgaagagactgccagatagtctggctgaagggatgaacactgctgctgacaacatg
ggacgcatgtcagagaaactgggccaggacatcaaacagtccatgttcaaggtgcctcca
ctgctccccaagtctgacgttgacccagagcactgccgagtctcagcccagctggacgac
aacgtgtgtgttttccaggtggatgataacatccccctgcgtgtgatgctgctgctgatg
gatgaggtgtttgacctgaaggagaggaaccagtggcttcgcaggaacatcaagaacctt
ctgcagcaactcatcagagccacatacggagacactatcaacaggaagatcgttgatcat
gtggacttcatgacagctccagaacaggtggcagactacgtcaagaagttcagggattca
tactggcccaacggaatcctagcagagtctccgccccgccgggacaagaacatccgcatg
aggacacgggtcgccgccaagaccaacctattgggaatcatgccagatgagttgaagcac
atcataggggcggatacgactcgtaaaggcatccttcgtgtgtttgacatgttccaacac
ggaccaatgaatcgtcggctggtctacgtgctcctagaaggattcctggagaccatgttc
cctcagtacaagttcccagagctgtttgtcaaactgcattcccgttcgccgcgcacagcc
agatatacacagaaactcaagagtacctccctgaagaggtga
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