Oncorhynchus gorbuscha (pink salmon): 124012303
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Entry
124012303 CDS
T07892
Symbol
nr1d2b
Name
(RefSeq) nuclear receptor subfamily 1 group D member 2b
KO
K08531
nuclear receptor subfamily 1 group D member 2
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ogo03000
]
124012303 (nr1d2b)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
ogo03310
]
124012303 (nr1d2b)
Transcription factors [BR:
ogo03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
124012303 (nr1d2b)
Nuclear receptors [BR:
ogo03310
]
1. Thyroid hormone like
1D. Rev-Erb
124012303 (nr1d2b)
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Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
SepZ
Motif
Other DBs
NCBI-GeneID:
124012303
NCBI-ProteinID:
XP_046181731
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Position
LG24:39406204..39417896
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AA seq
642 aa
AA seq
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MESTKAGGVIAYISSSSPESCHSDSNDCYNSSHLPHNSSHICRQGNVVDTPLTTAGLPLA
HTTAKTSAKCSITKINGLVLLCKVCGDIASGFHYGVHACEGCKGFFRRSIQQNIQYKKCL
KNESCAIMRINRNRCQQCRFKKCLLVGMSKDSVRFGRIPKREKQRMLLEMQSAVNNMMNN
SQLHSQLHGNTPLPLANQLQVPACPGGPRPQDVDSGLGSSSSSTSPAASPGSNQSEEPKH
HPESAVAMDTNRSTISASPSGSDRGTEDGIGSVTRAHQESFMYNQKQGSPSTQSQADAQP
TSPGEEQRVSDTGKRIEERNWNQQEAWNQKNQNQQNDLASFTATQAHDQAQERPTNTGPQ
GPDRHHCQGDDTTTPSHCPYSRGTPTTPTQNHCLYSRDRLPNSSPSGYFPAYTHHGGNNS
TSQATSNSHGGFTGPLWSGGNRMHLLCPMNTSPHVNPHKSGHGIWEEFSHSFTPAVREVV
EFAKRIPGFSDLSQHDQVSLLKAGTFEVLVVRFASLFDVKDRTVTFLGGTKYSVEALRAM
GAGDFLTSMMDFSENLMGLGLSEEEMSLFTTVVLISADRSGIENVNSVEALQETLIRHLK
GLVTKNHTNESAIFTKLLLRLPELRSLNNMHSEQLLAFKIHH
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
atggaatctacaaaagcagggggtgtaatagcctacatcagctcctccagccctgagtca
tgtcatagtgactcaaacgactgctacaactcctctcacctgccacacaactcctcccac
atctgtcgccagggcaatgtggtggacacgcccctaaccacggcaggtctcccactggcc
catactacagcaaagaccagtgcaaaatgcagcattactaaaatcaacggcctggtgctg
ctgtgtaaggtgtgtggagatattgcatctggattccactatggggtccatgcctgtgag
ggctgcaagggtttcttccgtcggagcatccagcagaacatccagtataagaagtgcctg
aagaacgagagctgtgccatcatgaggatcaacaggaaccgctgccagcagtgtcgcttc
aagaagtgtctgctggtcggcatgtccaaggactctgtgcgtttcggccgcatcccaaag
cgtgagaagcagcgaatgctgctagagatgcagagtgccgtgaacaacatgatgaacaac
agccagctacacagccagctccacggcaacacacccctccccctggccaatcagcttcag
gtgccggcctgccctggggggccccgcccccaagatgttgactctggtttaggctcatcc
tcttcctccacctctcccgccgcttcccccgggtccaaccaatcagaggagcccaaacat
cacccagagtctgcagtcgccatggatacaaaccgaagcactatatcggcgtctccaagt
ggttcagaccgcgggacagaggatgggattggctcggtgacccgggcccaccaggagtcc
tttatgtacaatcagaagcaaggtagcccctccacccagtcccaggctgatgcccagccg
acctccccgggggaggagcaacgtgtcagtgacactggaaagaggatagaggagaggaac
tggaaccagcaggaggcctggaaccagaagaaccagaaccagcagaatgacctggcctca
ttcacagccactcaggcccacgaccaggctcaggagaggcccactaacactgggcctcag
ggccctgacaggcaccattgccagggggatgacaccaccacccctagccattgcccctac
agcagaggtactcccaccacccccacccagaatcactgtctctacagtagagacagactg
cccaacagctcccctagtggctatttcccagcctacacccaccatggaggcaacaacagc
actagccaggccacctccaactcccatggaggattcacaggaccactgtggagcgggggc
aacaggatgcatctgctgtgtcccatgaacacatctccccatgtgaatccccataagtca
ggccatgggatctgggaggagttcagccacagtttcaccccggccgtcagggaggtggtg
gagtttgccaagcggatcccaggcttcagcgacctctcccaacacgaccaggtcagcctg
ctcaaggctggtacctttgaggtgctagtggtccgttttgcgtcgctgtttgatgtgaaa
gaccgcaccgtgacattcctgggtggtaccaagtacagcgtggaggcgttacgagccatg
ggcgccggcgacttcctgacctccatgatggacttcagcgaaaatctgatggggctcggc
cttagcgaggaggagatgagcctgttcaccaccgttgtcctcatctctgccgatcgctca
gggattgagaatgtgaactctgtggaggcgcttcaggaaactctgatccggcacctgaag
ggcctcgtcactaagaaccacaccaacgagtcggccatattcaccaagctgctcctcaga
ctgcccgaactgcgctcccttaataacatgcactctgagcagctgctggccttcaagatc
catcactag
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