Oncorhynchus gorbuscha (pink salmon): 124012304
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Entry
124012304 CDS
T07892
Name
(RefSeq) thyroid hormone receptor beta isoform X1
KO
K08362
thyroid hormone receptor beta
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo04080
Neuroactive ligand-receptor interaction
ogo04081
Hormone signaling
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
124012304
04081 Hormone signaling
124012304
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ogo03000
]
124012304
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
ogo03310
]
124012304
Transcription factors [BR:
ogo03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
124012304
Nuclear receptors [BR:
ogo03310
]
1. Thyroid hormone like
1A. Thyroid hormone receptor (THR)
124012304
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Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
CpXC
Motif
Other DBs
NCBI-GeneID:
124012304
NCBI-ProteinID:
XP_046181732
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Position
LG24:complement(39431073..39588340)
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AA seq
416 aa
AA seq
DB search
MSEQGDKCTTPRWKHEAMQNGYIPSYLDKDELCVVCGDKATGYHYRCITCEGCKGFFRRT
IQKNLNPTYACKYEAKCVIDKVTRNQCQECRFKKCIAVGMATDLVLDDSKRLAKRKLIEE
NRERRRKDELQKTVWDRPEPSQEEWDLIRMVTEAHMSTNAQGNHWKQKRKFLVEEAMLLN
EITCNLFYTSDQSAVGVKETKPEDIGQAPVINAPEGSKVDIEAFSQFTKIITPAITRVVD
FAKKLPMFCELPCEDQIILLKGCCMEIMSLRAAVRYDPESETLTLNGEMAVTRGQLKNGG
LGVVSDAIFDLGVSLSSFHLDDSEVALLQAVILLSSDRPGLTSVERIERCQEEFLLAFEH
YINYRKHKVAQFWPKLLMKVTDLRMIGACHASRFLHMKVECPNELFPPLFLEVFED
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atgtcagagcaaggagacaaatgcaccaccccccgctggaaacatgaagccatgcaaaat
gggtacatccccagttacctggacaaggacgagttatgtgtagtatgtggggataaagct
acaggatatcactatcgctgtatcacctgtgaaggatgtaagggtttcttccggcgaacg
atccagaagaacctgaacccgacgtacgcttgtaagtacgaggcaaagtgcgtcatcgat
aaggtgaccaggaaccagtgccaggaatgccgcttcaagaagtgcatcgctgtcggcatg
gcaacagacttggtgctggacgacagcaagcggctcgccaagcggaagttgatcgaggag
aaccgtgagcggcggcggaaggatgagctccagaagacggtgtgggaccggcctgagccg
tcccaggaggagtgggacctgatccgcatggtcaccgaggcccacatgtcaactaacgcc
cagggcaaccactggaaacagaaacgcaagttcttggtcgaggaagcaatgctacttaat
gaaataacatgtaatttattctatacttctgaccagagtgcagtgggggtgaaggaaacc
aagcctgaggacattggtcaagcaccggtcataaatgcacctgaagggagcaaagtggac
attgaagccttcagtcagtttacaaaaattatcacccccgccattacccgagtggtggat
tttgccaaaaagctgcctatgttctgtgagctgccttgtgaagaccagattatcctattg
aaaggctgctgcatggagatcatgtctttacgggcggccgttcgctatgaccccgagagc
gagacgctgacacttaacggggagatggccgtgacccgcggccagctgaagaacggaggc
ctgggtgtagtgtcggatgccatctttgatttgggcgtgtcgctgtcgtcgttccacctg
gacgactctgaggtcgctctgctacaggccgtcatcctcctgtcctccgaccgtccgggg
ctgaccagcgtggagcgtattgagcgctgccaggaggagttccttctggcctttgaacat
tacatcaactaccgcaaacacaaggtggcgcaattctggcccaagctgctgatgaaggtg
acggacctgcggatgatcggggcgtgccacgcctcccgcttcctgcatatgaaggtggag
tgccccaacgaactcttccccccactcttcctggaggtttttgaggattga
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