Oncorhynchus gorbuscha (pink salmon): 124012313
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Entry
124012313 CDS
T07892
Name
(RefSeq) cytotoxic and regulatory T-cell molecule
KO
K16361
cytotoxic and regulatory T-cell molecule
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
124012313
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ogo04515
]
124012313
04090 CD molecules [BR:
ogo04090
]
124012313
Cell adhesion molecules [BR:
ogo04515
]
Immunoglobulin superfamily
Nectin family
124012313
CD molecules [BR:
ogo04090
]
Proteins
124012313
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
ig
I-set
V-set
Ig_2
C2-set_2
C1-set
C2-set_3
Lep_receptor_Ig
LapA_dom
DUF6476
V-set_CD47
DUF4690
Ig_PDGFR_d4
Motif
Other DBs
NCBI-GeneID:
124012313
NCBI-ProteinID:
XP_046181752
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All DBs
Position
LG02:complement(88945839..88958561)
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AA seq
426 aa
AA seq
DB search
MPLKLQLCFLVLFVRGSVAVQHMTVMEGETLTIKCHIRNAHRSHVEWKNPNGHVMFFNDH
KALRDKRYKIINLSKSYFSVSVSDVTFKDGGLYTCLHYTKVPVVKSVTVTVLGMPKLEIT
EHNGKTTIKCSAVGNSHPPKISWLLGSGLEIDAQPQSQYLLEKNTYSSLDILHVQSHKRR
VTVKCIVRHPALHNSSLMNFIKIGQNPSEESHSTSRTSHWPSTEGPTTVSRWPGTQVSTE
KPTATALDWPNTKHSPASTPDSQLSTHSQPAHSVFEATGYTLANDSSSNSTSTTGIFDET
ERQRGNGSSAPLLIFLVTCLILGLLVVVAFFVIKLRRAHILWKKENEDSDQSVESSRSKS
SNEEKQSRRRGNGLFNIGFTKYVVEEPMATETTTTTSTKTEEAPEIQVIPQTDGATLSPQ
IKETEL
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atgccactaaagctgcagctttgcttcctagtcttgtttgtaaggggttccgttgcagtg
caacatatgaccgtgatggagggtgagactctaactattaagtgtcacattagaaatgct
cacaggagccacgtggaatggaagaatcctaacgggcatgtgatgtttttcaatgaccat
aaggccctgagggataagcgctacaagataatcaacttgtccaagtcctatttttcagtc
agtgtgtctgatgtcaccttcaaagatggaggcctctacacatgtttacattacacaaaa
gtgcctgtagtgaagtcagttaccgtgacagttttgggtatgccaaaattggagataaca
gaacacaatggaaagactaccatcaaatgttctgcagtgggaaatagccatcctcccaaa
atttcatggcttttggggagtgggttagaaattgatgctcagcctcagtcccagtacctt
ttggaaaaaaacacatattcctccctggatatcttgcatgttcagtcccacaagaggaga
gtcacagtgaaatgcatcgttcgccatccagccttacacaattcttctctgatgaatttc
ataaaaattggacagaatccctctgaggaatcacactccacttcgagaacctctcattgg
ccaagtacagaaggtccaacaacagtctcccgttggcctggtacacaggtgtcaacagaa
aaaccaacagctacagccttagattggcccaatacaaagcattcaccagcatcaacccct
gactcacaactcagcactcacagtcagccagcccactcagtgtttgaagctacagggtac
acacttgctaatgacagcagtagcaactcaaccagtactacaggaatcttcgatgagacg
gagaggcagagaggaaatggaagcagtgcgccgttgctcatcttcctcgtgacgtgcctc
atccttggtctgctggtggtcgttgcattctttgtaatcaagctgaggagggctcacata
ctctggaagaaagaaaatgaagactctgatcaatctgtggagagcagtagatcaaaatca
agcaatgaagagaaacaatccagaagaaggggaaatggactttttaacattggattcaca
aagtatgtcgttgaggaaccaatggcaacagagacgacaacaacaacaagcaccaaaaca
gaagaggctcctgaaattcaagtcatcccacaaacagatggagcaaccctaagccctcag
atcaaggagacggaactgtaa
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