Oncorhynchus gorbuscha (pink salmon): 124012320
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Entry
124012320 CDS
T07892
Name
(RefSeq) transcription factor Sox-19a-like
KO
K16796
transcription factor SOX2 (SOX group B)
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ogo03000
]
124012320
Transcription factors [BR:
ogo03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
124012320
BRITE hierarchy
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GFIT
Motif
Pfam:
HMG_box
HMG_box_2
HMG_WDHD1
HTH_24
Motif
Other DBs
NCBI-GeneID:
124012320
NCBI-ProteinID:
XP_046181797
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Position
LG01:complement(58535870..58538095)
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AA seq
311 aa
AA seq
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MVNMYNIMEHQLKSSGPSHHLGTGMPPANGGGGHGGGHTGSKPPAIQPDPMDKVKRPMNA
FMVWSRGERRKMAQENPKMHNSEISKRLGVAWKSLTDAEKRPFIDEAKRLRAVHMKDYPD
YKYKPRRKTKLMPKNNTLAAQYQMSAGNHLLSASTAQGQGGNPRIDSYGWGHTGGYTAAM
QSEALGYSQQLHRYDLSALQYQSSVAQAQAYMNGANAYSPMSYSSSPQQVSPVMSMVKQQ
SDGHSMSPSPTGTHNHHQAQRGPQVQGDHLRDMISMYMPGGDASDAQRGYSASAANIQQH
YLGGSAPLTHL
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atggtaaatatgtataacattatggaacaccaactcaagtcctctggtccctcgcatcat
cttggaacagggatgccacctgccaatggaggaggggggcacgggggcggccacacagga
tccaaaccaccggcaatccaacccgacccgatggacaaagtcaagcggcccatgaatgcc
ttcatggtatggtctcgcggtgagcgacggaaaatggcccaggagaatcccaaaatgcac
aattctgagatatccaaacgactgggtgtcgcgtggaaatctctgacagacgcagagaaa
aggcccttcattgacgaggccaagcgcctccgcgcggtgcacatgaaggattatccagac
tataaatacaaaccccgtcgtaaaaccaaactaatgccgaagaacaatactctagccgcg
cagtatcagatgtcggctggtaaccacctgctgagtgcgtccacggctcagggacaaggt
ggaaaccccagaatcgacagttatggctggggccacaccgggggctacacagcggcgatg
cagagcgaggcgctcggctacagccagcaacttcaccgctatgacctgtcagcacttcag
tatcagtccagcgtggcccaggcgcaggcctacatgaatggtgctaacgcatacagcccc
atgtcctacagcagcagcccccagcaggtcagcccagtgatgtccatggtgaagcagcag
tctgatggccacagcatgtccccctcccctacggggacccacaaccaccaccaggcccag
cgtggtccccaggtccagggggaccatctcagagacatgatcagcatgtacatgcctggg
ggagatgcctcagatgcccagagggggtactctgcctcggcagctaacatccagcagcat
tacctgggagggtcagctccactcacccacctttga
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