KEGG   Oncorhynchus gorbuscha (pink salmon): 124012420
Entry
124012420         CDS       T07892                                 
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein A3-like
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
ogo  Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ogo00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    124012420
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ogo03019]
    124012420
   03041 Spliceosome [BR:ogo03041]
    124012420
Messenger RNA biogenesis [BR:ogo03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     124012420
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     124012420
Spliceosome [BR:ogo03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    124012420
SSDB
Motif
Pfam: RRM_1 RRM_7 RRM_PARP14_3 Nup35_RRM_2 OB_RNB RRM_3 PHM7_cyt Lipl32
Other DBs
NCBI-GeneID: 124012420
NCBI-ProteinID: XP_046182397
LinkDB
Position
LG01:complement(112242417..112246982)
AA seq 333 aa
MEGHEAREPEQLRKLFIGGLSFETTEESLRIHFEQWGNLTDSVVMRDPNNKRSRGFGFVT
YSCVEEVDACMAARPHKVDGRVVEPKRAVSREDSNRPGAHLRVKKIFVGGIKEDTEEDHI
REYFETYGRIETIDIMEERATGKKRGFCFVSFDDNDTVDKIVAQKYHTINTHNCEVRKAL
SKQEMMEASNQRSGGGGSGNFMGRGGNFGRGGYGGGRGGYGGGDGYGGDGGNYSGGPSYG
GGRGGGGYGGGGPAYGNQGGGYDNYNDGNLGGNFGGGGGGGGNYNDFGNYRGQQSSYGPM
KGNNFGGRNSTSPYGGGYGSGNGSGGGYGSQRY
NT seq 1002 nt   +upstreamnt  +downstreamnt
atggagggtcatgaagctagggagcctgaacagctcaggaagctgtttattgggggcctc
agttttgaaaccactgaggaaagtttaaggatccattttgaacaatggggaaacctcaca
gatagtgtggtgatgagggacccaaacaacaagcgctcgagagggttcggctttgtaaca
tactcctgtgtggaggaggtggatgcctgcatggcagctcgccctcataaggtggacgga
cgtgttgttgaacctaaaagggctgtgtcgagagaggactccaacagaccaggtgcccac
ctgagggtgaagaagatctttgttgggggtatcaaggaggacacagaggaggaccatatc
agagagtactttgagacctacgggaggatcgagaccattgacattatggaggaacgtgca
actgggaagaagaggggattctgctttgtttcatttgatgacaatgacactgtggataaa
attgttgctcaaaaataccacacaataaacacacacaactgcgaagtcaggaaagcactt
tcaaaacaggaaatgatggaagcgtccaatcagaggagtgggggtggtggctctgggaac
ttcatgggtagaggaggcaactttggacgaggaggctacggtggaggaagaggaggttat
ggaggaggggatggatatgggggagatggtgggaactatagtggaggtcctagctacgga
ggtggacgtggtggggggggttatgggggaggaggtcctgcgtatggaaaccagggagga
ggatatgataactacaatgacggcaacttgggaggaaactttggtggtggaggaggaggt
ggtggaaattacaatgactttggtaactacagaggacagcaatccagctatggccccatg
aagggaaacaactttggtggcagaaactctacaagcccctatggaggtggctatggctca
ggcaatggaagtgggggtggctacggctcacagcgctattga

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